The numbers of fungi: are the most speciose genera truly diverse?

Fungi play vital roles in ecosystems as endophytes, pathogens and saprobes. The current estimate of fungal diversity is highly uncertain, ranging from 1.5 to 12 million, but only around 150,000 species have been named and classified to date. Since the introduction of DNA based methods for species id...

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Bibliographic Details
Published inFungal diversity Vol. 114; no. 1; pp. 387 - 462
Main Authors Bhunjun, Chitrabhanu S., Niskanen, Tuula, Suwannarach, Nakarin, Wannathes, Nopparat, Chen, Yi-Jyun, McKenzie, Eric H. C., Maharachchikumbura, Sajeewa S. N., Buyck, Bart, Zhao, Chang-Lin, Fan, Yu-Guang, Zhang, Jing-Yi, Dissanayake, Asha J., Marasinghe, Diana S., Jayawardena, Ruvishika S., Kumla, Jaturong, Padamsee, Mahajabeen, Chen, Ya-Ya, Liimatainen, Kare, Ammirati, Joseph F., Phukhamsakda, Chayanard, Liu, Jian-Kui, Phonrob, Wiphawanee, Randrianjohany, Émile, Hongsanan, Sinang, Cheewangkoon, Ratchadawan, Bundhun, Digvijayini, Khuna, Surapong, Yu, Wen-Jie, Deng, Lun-Sha, Lu, Yong-Zhong, Hyde, Kevin D., Lumyong, Saisamorn
Format Journal Article
LanguageEnglish
Published Dordrecht Springer Netherlands 01.05.2022
Springer Nature B.V
Subjects
Apiospora
Biodiversity
Biomedical and Life Sciences
Cercospora
Colletotrichum
Cortinarius
Cryptic species
Deoxyribonucleic acid
Diaporthe
DNA
Endophytes
Entoloma
Fungi
Genera
Identification methods
Inocybe
Introduced species
Life Sciences
Marasmius
Medical Microbiology
Meliola
Microbial Ecology
Microbiology
Mycology
New species
Passalora
Phyllachora
Phyllosticta
Plant Physiology
Pleurotus
Psathyrella
Pseudocercospora
Puccinia
Ramularia
Russula
species identification
Taxa
Uromyces
18 new taxa
Taxonomy
Fungal diversity
Host-specificity
Online AccessGet full text

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Abstract Fungi play vital roles in ecosystems as endophytes, pathogens and saprobes. The current estimate of fungal diversity is highly uncertain, ranging from 1.5 to 12 million, but only around 150,000 species have been named and classified to date. Since the introduction of DNA based methods for species identification, the number of newly described taxa has increased from approximately 1000 to around 2000 yearly. This demonstrates the importance of DNA based methods to identify and distinguish species, especially cryptic species. Many novel species from recent studies have been found in historically understudied regions and habitats, but these still represent only a small percentage of the estimated species. In this paper, we examine 16 genera from the top 40 most speciose genera as listed in Species Fungorum as case studies to examine the diversity of taxa in each genus. The genera treated herein are Cercospora, Diaporthe, Meliola, Passalora, Phyllachora , Phyllosticta, Pseudocercospora, Ramularia (ascomycetes) and Cortinarius , Entoloma , Inocybe , Marasmius , Psathyrella , Puccinia, Russula, Uromyces (basidiomycetes). We critically evaluate the number of species in these genera and correlate these numbers with the number of entries in GenBank. We introduce 18 new species Apiospora multiloculata , Candolleomyces thailandensis , Cortinarius acutoproximus, Cortinarius melleoalbus, Cortinarius pacificus, Cortinarius parvoacetosus, Diaporthe guizhouensis , Entoloma pseudosubcorvinum , Inocybe meirensongia, Marasmius albulus, Marasmius obscuroaurantiacus, Meliola camporesii , Phyllachora siamensis , Phyllosticta doitungensis, Picipes yuxiensis , Pseudocercospora vignae, Puccinia maureanui and Russula inornata . We also introduce a new record of Candolleomyces cladii-marisci and Inocybe iringolkavensis . We discuss the genera Colletotrichum and Pleurotus that are speciose, but do not occur in the top 40. We hypothesize whether there might be more species in these genera and discuss why these genera have some of the largest number of species.
AbstractList Fungi play vital roles in ecosystems as endophytes, pathogens and saprobes. The current estimate of fungal diversity is highly uncertain, ranging from 1.5 to 12 million, but only around 150,000 species have been named and classified to date. Since the introduction of DNA based methods for species identification, the number of newly described taxa has increased from approximately 1000 to around 2000 yearly. This demonstrates the importance of DNA based methods to identify and distinguish species, especially cryptic species. Many novel species from recent studies have been found in historically understudied regions and habitats, but these still represent only a small percentage of the estimated species. In this paper, we examine 16 genera from the top 40 most speciose genera as listed in Species Fungorum as case studies to examine the diversity of taxa in each genus. The genera treated herein are Cercospora, Diaporthe, Meliola, Passalora, Phyllachora, Phyllosticta, Pseudocercospora, Ramularia (ascomycetes) and Cortinarius, Entoloma, Inocybe, Marasmius, Psathyrella, Puccinia, Russula, Uromyces (basidiomycetes). We critically evaluate the number of species in these genera and correlate these numbers with the number of entries in GenBank. We introduce 18 new species Apiospora multiloculata, Candolleomyces thailandensis, Cortinarius acutoproximus, Cortinarius melleoalbus, Cortinarius pacificus, Cortinarius parvoacetosus, Diaporthe guizhouensis, Entoloma pseudosubcorvinum, Inocybe meirensongia, Marasmius albulus, Marasmius obscuroaurantiacus, Meliola camporesii, Phyllachora siamensis, Phyllosticta doitungensis, Picipes yuxiensis, Pseudocercospora vignae, Puccinia maureanui and Russula inornata. We also introduce a new record of Candolleomyces cladii-marisci and Inocybe iringolkavensis. We discuss the genera Colletotrichum and Pleurotus that are speciose, but do not occur in the top 40. We hypothesize whether there might be more species in these genera and discuss why these genera have some of the largest number of species.
Fungi play vital roles in ecosystems as endophytes, pathogens and saprobes. The current estimate of fungal diversity is highly uncertain, ranging from 1.5 to 12 million, but only around 150,000 species have been named and classified to date. Since the introduction of DNA based methods for species identification, the number of newly described taxa has increased from approximately 1000 to around 2000 yearly. This demonstrates the importance of DNA based methods to identify and distinguish species, especially cryptic species. Many novel species from recent studies have been found in historically understudied regions and habitats, but these still represent only a small percentage of the estimated species. In this paper, we examine 16 genera from the top 40 most speciose genera as listed in Species Fungorum as case studies to examine the diversity of taxa in each genus. The genera treated herein are Cercospora, Diaporthe, Meliola, Passalora, Phyllachora , Phyllosticta, Pseudocercospora, Ramularia (ascomycetes) and Cortinarius , Entoloma , Inocybe , Marasmius , Psathyrella , Puccinia, Russula, Uromyces (basidiomycetes). We critically evaluate the number of species in these genera and correlate these numbers with the number of entries in GenBank. We introduce 18 new species Apiospora multiloculata , Candolleomyces thailandensis , Cortinarius acutoproximus, Cortinarius melleoalbus, Cortinarius pacificus, Cortinarius parvoacetosus, Diaporthe guizhouensis , Entoloma pseudosubcorvinum , Inocybe meirensongia, Marasmius albulus, Marasmius obscuroaurantiacus, Meliola camporesii , Phyllachora siamensis , Phyllosticta doitungensis, Picipes yuxiensis , Pseudocercospora vignae, Puccinia maureanui and Russula inornata . We also introduce a new record of Candolleomyces cladii-marisci and Inocybe iringolkavensis . We discuss the genera Colletotrichum and Pleurotus that are speciose, but do not occur in the top 40. We hypothesize whether there might be more species in these genera and discuss why these genera have some of the largest number of species.
Author Bhunjun, Chitrabhanu S.
Padamsee, Mahajabeen
Maharachchikumbura, Sajeewa S. N.
Buyck, Bart
Lu, Yong-Zhong
Lumyong, Saisamorn
Suwannarach, Nakarin
Wannathes, Nopparat
Randrianjohany, Émile
Hongsanan, Sinang
Hyde, Kevin D.
Khuna, Surapong
Deng, Lun-Sha
Zhao, Chang-Lin
Liimatainen, Kare
Phonrob, Wiphawanee
Chen, Yi-Jyun
Yu, Wen-Jie
Fan, Yu-Guang
Marasinghe, Diana S.
Niskanen, Tuula
Bundhun, Digvijayini
Phukhamsakda, Chayanard
Liu, Jian-Kui
Dissanayake, Asha J.
Ammirati, Joseph F.
McKenzie, Eric H. C.
Zhang, Jing-Yi
Cheewangkoon, Ratchadawan
Jayawardena, Ruvishika S.
Chen, Ya-Ya
Kumla, Jaturong
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Taxonomy
Fungal diversity
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Snippet Fungi play vital roles in ecosystems as endophytes, pathogens and saprobes. The current estimate of fungal diversity is highly uncertain, ranging from 1.5 to...
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SubjectTerms Apiospora
Biodiversity
Biomedical and Life Sciences
Cercospora
Colletotrichum
Cortinarius
Cryptic species
Deoxyribonucleic acid
Diaporthe
DNA
Endophytes
Entoloma
Fungi
Genera
Identification methods
Inocybe
Introduced species
Life Sciences
Marasmius
Medical Microbiology
Meliola
Microbial Ecology
Microbiology
Mycology
New species
Passalora
Phyllachora
Phyllosticta
Plant Physiology
Pleurotus
Psathyrella
Pseudocercospora
Puccinia
Ramularia
Russula
species identification
Taxa
Uromyces
Title The numbers of fungi: are the most speciose genera truly diverse?
URI https://link.springer.com/article/10.1007/s13225-022-00501-4
https://www.proquest.com/docview/2676581376
https://www.proquest.com/docview/2718255334
Volume 114
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