Use of whole genomic sequencing to detect New Delhi metallo-B-lactamase (NDM)-producing Escherichia coli outbreak associated with endoscopic procedures - Suleyman, Geehan; Shallal, Anita; Ruby, Abigail; Chami, Eman; Gubler, Jenny; McNamara, Sara; Miles-Jay, Arianna; Tibbetts, Robert; Alangaden, George (Infection control and hospital epidemiology, 2024)
Keywords: Adult; Aged; Aged, 80 and over; Antimicrobial agents; Bacterial infections; beta-Lactamases - genetics; Bile; Case-Control Studies; Cholangitis; Cross Infection - epidemiology; Cross Infection - microbiology; Disease control; Disease Outbreaks; Disease transmission; E coli; Endoscopy; Endoscopy - adverse effects; Epidemics; Epidemiology; Escherichia coli - genetics; Escherichia coli - isolation & purification; Escherichia coli Infections - epidemiology; Escherichia coli Infections - microbiology; Escherichia coli Infections - transmission; Female; Females; Genomes; Hospitalization; Humans; Infection Control - methods; Laboratories; Liver transplants; Male; Medical research; Metastasis; Michigan - epidemiology; Middle Aged; Original Article; Outbreaks; Patients; Phylogeny; Polymorphism, Single Nucleotide; Public health; Whole Genome Sequencing; Michigan; United States--US