Characterizing urban soils in New York City: profile properties and bacterial communities

Purpose The influence of human activities on the development and functioning of urban soils and their profile characteristics is still inadequately understood. Microbial communities can change due to anthropogenic disturbances and it is unclear how they exist along urban soil profiles. This study in...

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Published inJournal of soils and sediments Vol. 17; no. 2; pp. 393 - 407
Main Authors Huot, Hermine, Joyner, Jessica, Córdoba, Alonso, Shaw, Richard K., Wilson, Michael A., Walker, Roxanne, Muth, Theodore R., Cheng, Zhongqi
Format Journal Article
LanguageEnglish
Published Berlin/Heidelberg Springer Berlin Heidelberg 01.02.2017
Springer Nature B.V
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Abstract Purpose The influence of human activities on the development and functioning of urban soils and their profile characteristics is still inadequately understood. Microbial communities can change due to anthropogenic disturbances and it is unclear how they exist along urban soil profiles. This study investigates the dynamic soil properties (DSPs) and the bacterial communities along the profiles of urban soils in New York City (NYC) with varying degree of human disturbances. Materials and methods Eleven pedons were investigated across NYC as well as one control soil in a nearby non-urban area. Six soils are formed in naturally deposited materials (ND) and five in human-altered and human-transported materials (HAHT). For each soil, the profile was described and each horizon was sampled to assess DSPs and the bacterial community composition and diversity. Results and discussion The development and the DSPs of NYC soils are influenced by the incorporation of HAHT materials and atmospheric deposits. The most abundant bacterial taxa observed in the NYC soils are also present in most natural and urban soils worldwide. The bacterial diversity was lower in some soils formed in ND materials, in which the contribution of low-abundance taxa was more restricted. Some differences in bacterial community composition separated the soils formed in ND materials and in dredged sediments from the soils formed in high artifact fill and serpentinite till. Changes in bacterial community composition between soil horizons were more noticeable in urban soils formed in ND materials than in those formed in HAHT materials which display less differentiated profiles and in the non-urban highly weathered soil. Conclusions The bacterial diversity is not linked to the degree of disturbance of the urban soils but the variations in community composition between pedons and along soil profiles could be the result of changes in soil development and properties related to human activities and should be consistently characterized in urban soils.
AbstractList Purpose The influence of human activities on the development and functioning of urban soils and their profile characteristics is still inadequately understood. Microbial communities can change due to anthropogenic disturbances and it is unclear how they exist along urban soil profiles. This study investigates the dynamic soil properties (DSPs) and the bacterial communities along the profiles of urban soils in New York City (NYC) with varying degree of human disturbances. Materials and methods Eleven pedons were investigated across NYC as well as one control soil in a nearby non-urban area. Six soils are formed in naturally deposited materials (ND) and five in human-altered and human-transported materials (HAHT). For each soil, the profile was described and each horizon was sampled to assess DSPs and the bacterial community composition and diversity. Results and discussion The development and the DSPs of NYC soils are influenced by the incorporation of HAHT materials and atmospheric deposits. The most abundant bacterial taxa observed in the NYC soils are also present in most natural and urban soils worldwide. The bacterial diversity was lower in some soils formed in ND materials, in which the contribution of low-abundance taxa was more restricted. Some differences in bacterial community composition separated the soils formed in ND materials and in dredged sediments from the soils formed in high artifact fill and serpentinite till. Changes in bacterial community composition between soil horizons were more noticeable in urban soils formed in ND materials than in those formed in HAHT materials which display less differentiated profiles and in the non-urban highly weathered soil. Conclusions The bacterial diversity is not linked to the degree of disturbance of the urban soils but the variations in community composition between pedons and along soil profiles could be the result of changes in soil development and properties related to human activities and should be consistently characterized in urban soils.
The influence of human activities on the development and functioning of urban soils and their profile characteristics is still inadequately understood. Microbial communities can change due to anthropogenic disturbances and it is unclear how they exist along urban soil profiles. This study investigates the dynamic soil properties (DSPs) and the bacterial communities along the profiles of urban soils in New York City (NYC) with varying degree of human disturbances. Eleven pedons were investigated across NYC as well as one control soil in a nearby non-urban area. Six soils are formed in naturally deposited materials (ND) and five in human-altered and human-transported materials (HAHT). For each soil, the profile was described and each horizon was sampled to assess DSPs and the bacterial community composition and diversity. The development and the DSPs of NYC soils are influenced by the incorporation of HAHT materials and atmospheric deposits. The most abundant bacterial taxa observed in the NYC soils are also present in most natural and urban soils worldwide. The bacterial diversity was lower in some soils formed in ND materials, in which the contribution of low-abundance taxa was more restricted. Some differences in bacterial community composition separated the soils formed in ND materials and in dredged sediments from the soils formed in high artifact fill and serpentinite till. Changes in bacterial community composition between soil horizons were more noticeable in urban soils formed in ND materials than in those formed in HAHT materials which display less differentiated profiles and in the non-urban highly weathered soil. The bacterial diversity is not linked to the degree of disturbance of the urban soils but the variations in community composition between pedons and along soil profiles could be the result of changes in soil development and properties related to human activities and should be consistently characterized in urban soils.
Purpose The influence of human activities on the development and functioning of urban soils and their profile characteristics is still inadequately understood. Microbial communities can change due to anthropogenic disturbances and it is unclear how they exist along urban soil profiles. This study investigates the dynamic soil properties (DSPs) and the bacterial communities along the profiles of urban soils in New York City (NYC) with varying degree of human disturbances. Materials and methods Eleven pedons were investigated across NYC as well as one control soil in a nearby non-urban area. Six soils are formed in naturally deposited materials (ND) and five in human-altered and human-transported materials (HAHT). For each soil, the profile was described and each horizon was sampled to assess DSPs and the bacterial community composition and diversity. Results and discussion The development and the DSPs of NYC soils are influenced by the incorporation of HAHT materials and atmospheric deposits. The most abundant bacterial taxa observed in the NYC soils are also present in most natural and urban soils worldwide. The bacterial diversity was lower in some soils formed in ND materials, in which the contribution of low-abundance taxa was more restricted. Some differences in bacterial community composition separated the soils formed in ND materials and in dredged sediments from the soils formed in high artifact fill and serpentinite till. Changes in bacterial community composition between soil horizons were more noticeable in urban soils formed in ND materials than in those formed in HAHT materials which display less differentiated profiles and in the non-urban highly weathered soil. Conclusions The bacterial diversity is not linked to the degree of disturbance of the urban soils but the variations in community composition between pedons and along soil profiles could be the result of changes in soil development and properties related to human activities and should be consistently characterized in urban soils.
Author Muth, Theodore R.
Joyner, Jessica
Huot, Hermine
Córdoba, Alonso
Shaw, Richard K.
Cheng, Zhongqi
Wilson, Michael A.
Walker, Roxanne
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  fullname: Joyner, Jessica
  organization: Department of Biology, Brooklyn College of City University of New York
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  fullname: Shaw, Richard K.
  organization: USDA-National Resources Conservation Service
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  fullname: Wilson, Michael A.
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  givenname: Zhongqi
  surname: Cheng
  fullname: Cheng, Zhongqi
  email: zcheng@brooklyn.cuny.edu
  organization: Department of Earth and Environmental Sciences, Brooklyn College of City University of New York
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Snippet Purpose The influence of human activities on the development and functioning of urban soils and their profile characteristics is still inadequately understood....
Purpose The influence of human activities on the development and functioning of urban soils and their profile characteristics is still inadequately understood....
The influence of human activities on the development and functioning of urban soils and their profile characteristics is still inadequately understood....
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SubjectTerms Anthropogenic factors
Bacteria
Cities
Community composition
Earth and Environmental Science
Environ Risk Assess
Environment
Environmental Physics
Microbial activity
Sec 2 • Global Change
Soil horizons
Soil profiles
Soil properties
Soil Science & Conservation
Soils
Sustainable Land Use • Research Article
Urban areas
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Title Characterizing urban soils in New York City: profile properties and bacterial communities
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