DSFF-GAN: A novel stain transfer network for generating immunohistochemical image of endometrial cancer
Immunohistochemistry (IHC) is a commonly used histological examination technique. Compared to Hematoxylin and Eosin (H&E) staining, it enables the examination of protein expression and localization in tissues, which is valuable for cancer treatment and prognosis assessment, such as the detection...
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Published in | Computers in biology and medicine Vol. 170; p. 108046 |
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Main Authors | , , , , , , |
Format | Journal Article |
Language | English |
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Elsevier Ltd
01.03.2024
Elsevier Limited |
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Abstract | Immunohistochemistry (IHC) is a commonly used histological examination technique. Compared to Hematoxylin and Eosin (H&E) staining, it enables the examination of protein expression and localization in tissues, which is valuable for cancer treatment and prognosis assessment, such as the detection and diagnosis of endometrial cancer. However, IHC involves multiple staining steps, is time-consuming and expensive. One potential solution is to utilize deep learning networks to generate corresponding virtual IHC images from H&E images. However, the similarity of the IHC image generated by the existing methods needs to be further improved. In this work, we propose a novel dual-scale feature fusion (DSFF) generative adversarial network named DSFF-GAN, which comprises a cycle structure-color similarity loss, and DSFF block to constrain the model's training process and enhance its stain transfer capability. In addition, our method incorporates labeling information of positive cell regions as prior knowledge into the network to further improve the evaluation metrics. We train and test our model using endometrial cancer and publicly available breast cancer IHC datasets, and compare it with state-of-the-art methods. Compared to previous methods, our model demonstrates significant improvements in most evaluation metrics on both datasets. The research results show that our method further improves the quality of image generation and has potential value for the future clinical application of virtual IHC images.
•A novel stain transfer network called DSFF-GAN was developed to generate IHC images.•A detailed image registration description for large-scale stained pathology images.•DSFF block and S–C Loss were proposed to improve network performance.•Positive region labels were input into the network to enhance the evaluation metrics.•The model was verified on both endometrial cancer and publicly breast cancer datasets. |
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AbstractList | Immunohistochemistry (IHC) is a commonly used histological examination technique. Compared to Hematoxylin and Eosin (H&E) staining, it enables the examination of protein expression and localization in tissues, which is valuable for cancer treatment and prognosis assessment, such as the detection and diagnosis of endometrial cancer. However, IHC involves multiple staining steps, is time-consuming and expensive. One potential solution is to utilize deep learning networks to generate corresponding virtual IHC images from H&E images. However, the similarity of the IHC image generated by the existing methods needs to be further improved. In this work, we propose a novel dual-scale feature fusion (DSFF) generative adversarial network named DSFF-GAN, which comprises a cycle structure-color similarity loss, and DSFF block to constrain the model's training process and enhance its stain transfer capability. In addition, our method incorporates labeling information of positive cell regions as prior knowledge into the network to further improve the evaluation metrics. We train and test our model using endometrial cancer and publicly available breast cancer IHC datasets, and compare it with state-of-the-art methods. Compared to previous methods, our model demonstrates significant improvements in most evaluation metrics on both datasets. The research results show that our method further improves the quality of image generation and has potential value for the future clinical application of virtual IHC images. Immunohistochemistry (IHC) is a commonly used histological examination technique. Compared to Hematoxylin and Eosin (H&E) staining, it enables the examination of protein expression and localization in tissues, which is valuable for cancer treatment and prognosis assessment, such as the detection and diagnosis of endometrial cancer. However, IHC involves multiple staining steps, is time-consuming and expensive. One potential solution is to utilize deep learning networks to generate corresponding virtual IHC images from H&E images. However, the similarity of the IHC image generated by the existing methods needs to be further improved. In this work, we propose a novel dual-scale feature fusion (DSFF) generative adversarial network named DSFF-GAN, which comprises a cycle structure-color similarity loss, and DSFF block to constrain the model's training process and enhance its stain transfer capability. In addition, our method incorporates labeling information of positive cell regions as prior knowledge into the network to further improve the evaluation metrics. We train and test our model using endometrial cancer and publicly available breast cancer IHC datasets, and compare it with state-of-the-art methods. Compared to previous methods, our model demonstrates significant improvements in most evaluation metrics on both datasets. The research results show that our method further improves the quality of image generation and has potential value for the future clinical application of virtual IHC images. •A novel stain transfer network called DSFF-GAN was developed to generate IHC images.•A detailed image registration description for large-scale stained pathology images.•DSFF block and S–C Loss were proposed to improve network performance.•Positive region labels were input into the network to enhance the evaluation metrics.•The model was verified on both endometrial cancer and publicly breast cancer datasets. |
ArticleNumber | 108046 |
Author | Pan, Wei Ma, Yihao Yang, Fan Li, Juan Miao, Yuehong Wang, Zhengrong Zhang, Yiqiong |
Author_xml | – sequence: 1 givenname: Yihao orcidid: 0009-0002-8577-7638 surname: Ma fullname: Ma, Yihao organization: School of Biology & Engineering (School of Modern Industry for Health and Medicine), Guizhou Medical University, Guiyang, Guizhou Province, China – sequence: 2 givenname: Yiqiong surname: Zhang fullname: Zhang, Yiqiong organization: Guizhou Prenatal Diagnostic Center, Affiliated Hospital of Guizhou Medical University, Guiyang, Guizhou Province, China – sequence: 3 givenname: Zhengrong surname: Wang fullname: Wang, Zhengrong organization: Guizhou Prenatal Diagnostic Center, Affiliated Hospital of Guizhou Medical University, Guiyang, Guizhou Province, China – sequence: 4 givenname: Juan surname: Li fullname: Li, Juan organization: Department of Pathology, Affiliated Hospital of Guizhou Medical University, Guiyang, Guizhou Province, China – sequence: 5 givenname: Yuehong surname: Miao fullname: Miao, Yuehong organization: School of Biology & Engineering (School of Modern Industry for Health and Medicine), Guizhou Medical University, Guiyang, Guizhou Province, China – sequence: 6 givenname: Fan surname: Yang fullname: Yang, Fan email: yangfan0404@126.com organization: School of Biology & Engineering (School of Modern Industry for Health and Medicine), Guizhou Medical University, Guiyang, Guizhou Province, China – sequence: 7 givenname: Wei surname: Pan fullname: Pan, Wei email: 313831139@qq.com organization: Guizhou Prenatal Diagnostic Center, Affiliated Hospital of Guizhou Medical University, Guiyang, Guizhou Province, China |
BackLink | https://www.ncbi.nlm.nih.gov/pubmed/38325211$$D View this record in MEDLINE/PubMed |
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Cites_doi | 10.1016/j.compbiomed.2022.105444 10.1117/1.JMI.7.1.012704 10.3389/fmolb.2020.00183 10.1038/s41467-020-19334-3 10.1097/PGP.0000000000000518 10.3389/fmolb.2020.571180 10.1109/TMI.2021.3069874 10.5858/2010-0454-RAR.1 10.1145/358669.358692 10.1038/s41598-022-16861-5 10.1109/TIP.2003.819861 10.3389/fmolb.2021.672531 10.1002/dc.21234 10.1038/modpathol.2014.156 10.1038/modpathol.2016.203 10.1016/j.compbiomed.2022.105928 10.1002/ijgo.14923 10.1109/MSP.2008.930649 10.1038/nmeth.2089 10.1097/PAP.0000000000000182 10.1016/j.compbiomed.2023.106769 10.1023/B:VISI.0000029664.99615.94 10.1038/bjc.1996.563 10.1016/S0140-6736(22)00323-3 10.1002/dc.21825 10.1155/2018/6358189 10.1002/ijc.33588 |
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Keywords | Dual-scale feature fusion block Immunohistochemical image Endometrial cancer Stain transfer |
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References | Alamir, Alghamdi (bib12) 2022; 55 Hu, Shen, Sun (bib39) 2018 Woo, Park, Lee, Kweon (bib40) 2018 Wang, Bovik (bib36) 2009; 26 Xu, Li, Zhu, Chen, He, Chen (bib19) 2020; 7 Li, Hu, Chen, Kak (bib23) 2023 Fischler, Bolles (bib31) 1981; 24 Zhu, Park, Isola, Efros (bib13) 2017 Liu, Zhu, Xu, Jia, Shi, Jin (bib21) 2022 Guan, Chen, Wei, Heidari, Hu, Yang, Zheng, Zhou, Chen, Chen (bib17) 2022; 145 Lin, Zeng, Wang, Chen, Fang, Zhang, Ji, Wang, Zhang (bib24) 2022 Gutierrez, Schiff (bib6) 2011; 135 Borovec, Munoz-Barrutia, Kybic (bib30) 2018 Wang, Bovik, Sheikh, Simoncelli (bib34) 2004; 13 Bataillou, Piskun, Maxime (bib35) 2013; 1 Saadeh, Abdullah, Erashdi, Sughayer, Al-Kadi (bib38) 2020; 7 Zhu, Liu, Xu, Yu, Aggarwal, Corredor, Madabhushi, Qu, Fan, Li, Li, Guan, Zhang, Singh, Akram, Sarker, Shi, Jin (bib22) 2023 Hou, Zhou, Feng (bib41) 2021 Wharton, Wood, Manesse, Maclean, Leiss, Zuraw (bib7) 2021; 8 He, Zhang, Ren, Sun (bib33) 2016 Schneider, Rasband, Eliceiri (bib32) 2012; 9 Toda, Teramoto, Kondo, Imaizumi, Saito, Fujita (bib18) 2022; 12 Reid, Bagci, Ohike, Saka, Erbarut Seven, Dursun, Balci, Gucer, Jang, Tajiri, Basturk, Kong, Goodman, Akkas, Adsay (bib37) 2015; 28 Fischer, Jacobson, Rose, Zeller (bib3) 2008; 3 Barnes, Harris, Smith, Millis, Rubens (bib5) 1996; 74 Qin, Liu, Zhu, Ling (bib16) 2022; 148 Ferlay, Colombet, Soerjomataram, Parkin, Piñeros, Znaor, Bray (bib2) 2021; 149 Konstandinou, Glotsos, Kostopoulos, Kalatzis, Ravazoula, Michail, Lavdas, Cavouras, Sakellaropoulos (bib10) 2018; 2018 Isola, Zhu, Zhou, Efros (bib14) 2017 Crosbie, Kitson, McAlpine, Mukhopadhyay, Powell, Singh (bib1) 2022; 399 Liu, Li, Zheng, Zhu, Liu, Hu, Luo, Liao, Liu, He, Chen (bib11) 2020; 7 Lowe (bib29) 2004; 60 Liu, Zhang, Liu, Han, Shi, Guan, He (bib20) 2021; 40 Kosmas, Stamoulas, Marouga, Kavantzas, Patsouris, Athanassiadou (bib28) 2013; 41 Kitson, Sivalingam, Bolton, McVey, Nickkho-Amiry, Powell, Leary, Nijman, Nout, Bosse, Renehan, Kitchener, Edmondson, Crosbie (bib4) 2017; 30 Dey (bib9) 2010; 38 McCluggage (bib27) 2018; 25 Berek, Matias-Guiu, Creutzberg, Fotopoulou, Gaffney, Kehoe, Lindemann, Mutch, Concin (bib26) 2023; 162 Soslow, Tornos, Park, Malpica, Matias-Guiu, Oliva, Parkash, Carlson, McCluggage, Gilks (bib25) 2019; 38 Naik, Madani, Esteva, Keskar, Press, Ruderman, Agus, Socher (bib8) 2020; 11 Liu, Chen, Yao, Xiang, Zhou, Du, Liu, Liu, Yu (bib15) 2023; 157 Bataillou (10.1016/j.compbiomed.2024.108046_bib35) 2013; 1 Wharton (10.1016/j.compbiomed.2024.108046_bib7) 2021; 8 Naik (10.1016/j.compbiomed.2024.108046_bib8) 2020; 11 Li (10.1016/j.compbiomed.2024.108046_bib23) 2023 Berek (10.1016/j.compbiomed.2024.108046_bib26) 2023; 162 Ferlay (10.1016/j.compbiomed.2024.108046_bib2) 2021; 149 Woo (10.1016/j.compbiomed.2024.108046_bib40) 2018 Fischer (10.1016/j.compbiomed.2024.108046_bib3) 2008; 3 Reid (10.1016/j.compbiomed.2024.108046_bib37) 2015; 28 Kosmas (10.1016/j.compbiomed.2024.108046_bib28) 2013; 41 Liu (10.1016/j.compbiomed.2024.108046_bib21) 2022 Konstandinou (10.1016/j.compbiomed.2024.108046_bib10) 2018; 2018 Wang (10.1016/j.compbiomed.2024.108046_bib34) 2004; 13 Crosbie (10.1016/j.compbiomed.2024.108046_bib1) 2022; 399 Alamir (10.1016/j.compbiomed.2024.108046_bib12) 2022; 55 Soslow (10.1016/j.compbiomed.2024.108046_bib25) 2019; 38 He (10.1016/j.compbiomed.2024.108046_bib33) 2016 Fischler (10.1016/j.compbiomed.2024.108046_bib31) 1981; 24 Qin (10.1016/j.compbiomed.2024.108046_bib16) 2022; 148 Liu (10.1016/j.compbiomed.2024.108046_bib15) 2023; 157 Schneider (10.1016/j.compbiomed.2024.108046_bib32) 2012; 9 Liu (10.1016/j.compbiomed.2024.108046_bib11) 2020; 7 Toda (10.1016/j.compbiomed.2024.108046_bib18) 2022; 12 Barnes (10.1016/j.compbiomed.2024.108046_bib5) 1996; 74 Zhu (10.1016/j.compbiomed.2024.108046_bib22) 2023 Isola (10.1016/j.compbiomed.2024.108046_bib14) 2017 Hou (10.1016/j.compbiomed.2024.108046_bib41) 2021 Guan (10.1016/j.compbiomed.2024.108046_bib17) 2022; 145 Wang (10.1016/j.compbiomed.2024.108046_bib36) 2009; 26 Dey (10.1016/j.compbiomed.2024.108046_bib9) 2010; 38 Kitson (10.1016/j.compbiomed.2024.108046_bib4) 2017; 30 Liu (10.1016/j.compbiomed.2024.108046_bib20) 2021; 40 Saadeh (10.1016/j.compbiomed.2024.108046_bib38) 2020; 7 Lowe (10.1016/j.compbiomed.2024.108046_bib29) 2004; 60 McCluggage (10.1016/j.compbiomed.2024.108046_bib27) 2018; 25 Borovec (10.1016/j.compbiomed.2024.108046_bib30) 2018 Zhu (10.1016/j.compbiomed.2024.108046_bib13) 2017 Xu (10.1016/j.compbiomed.2024.108046_bib19) 2020; 7 Lin (10.1016/j.compbiomed.2024.108046_bib24) 2022 Hu (10.1016/j.compbiomed.2024.108046_bib39) 2018 Gutierrez (10.1016/j.compbiomed.2024.108046_bib6) 2011; 135 |
References_xml | – volume: 38 start-page: 382 year: 2010 end-page: 390 ident: bib9 article-title: Cancer nucleus: morphology and beyond publication-title: Diagn. Cytopathol. contributor: fullname: Dey – volume: 26 start-page: 98 year: 2009 end-page: 117 ident: bib36 article-title: Mean squared error: love it or leave it? A new look at signal fidelity measures publication-title: IEEE Signal Process. Mag. contributor: fullname: Bovik – volume: 40 start-page: 1977 year: 2021 end-page: 1989 ident: bib20 article-title: Unpaired stain transfer using pathology-consistent constrained generative adversarial networks publication-title: IEEE Trans. Med. Imag. contributor: fullname: He – start-page: 13713 year: 2021 end-page: 13722 ident: bib41 article-title: Coordinate attention for efficient mobile network design publication-title: 2021 IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR) contributor: fullname: Feng – volume: 74 start-page: 1445 year: 1996 end-page: 1451 ident: bib5 article-title: Immunohistochemical determination of oestrogen receptor: comparison of different methods of assessment of staining and correlation with clinical outcome of breast cancer patients publication-title: Br. J. Cancer contributor: fullname: Rubens – volume: 25 start-page: 71 year: 2018 end-page: 84 ident: bib27 article-title: Pathologic staging of endometrial carcinomas: selected areas of difficulty publication-title: Adv. Anat. Pathol. contributor: fullname: McCluggage – start-page: 770 year: 2016 end-page: 778 ident: bib33 article-title: Deep residual learning for image recognition publication-title: 2016 IEEE Conference on Computer Vision and Pattern Recognition contributor: fullname: Sun – volume: 7 start-page: 183 year: 2020 ident: bib11 article-title: Predict Ki-67 positive cells in H&E-Stained images using deep learning independently from IHC-stained images publication-title: Front. Mol. Biosci. contributor: fullname: Chen – volume: 9 start-page: 671 year: 2012 end-page: 675 ident: bib32 article-title: NIH Image to ImageJ: 25 years of image analysis publication-title: Nat. Methods contributor: fullname: Eliceiri – start-page: 7132 year: 2018 end-page: 7141 ident: bib39 article-title: Squeeze-and-excitation networks publication-title: 2018 IEEE/CVF Conference on Computer Vision and Pattern Recognition contributor: fullname: Sun – start-page: 2223 year: 2017 end-page: 2232 ident: bib13 article-title: Unpaired image-to-image translation using cycle-consistent adversarial networks publication-title: 2017 IEEE International Conference on Computer Vision (ICCV) contributor: fullname: Efros – volume: 24 start-page: 381 year: 1981 end-page: 395 ident: bib31 article-title: Random sample consensus: a paradigm for model fitting with applications to image analysis and automated cartography publication-title: Commun. ACM contributor: fullname: Bolles – volume: 399 start-page: 1412 year: 2022 end-page: 1428 ident: bib1 article-title: Endometrial cancer publication-title: Lancet contributor: fullname: Singh – volume: 157 start-page: 17 year: 2023 ident: bib15 article-title: BTMF-GAN: a multi-modal MRI fusion generative adversarial network for brain tumors publication-title: Comput. Biol. Med. contributor: fullname: Yu – volume: 2018 year: 2018 ident: bib10 article-title: Multifeature quantification of nuclear properties from images of H&E-Stained biopsy material for investigating changes in nuclear structure with advancing CIN grade publication-title: J. Healthc. Eng. contributor: fullname: Sakellaropoulos – volume: 55 start-page: 96 year: 2022 ident: bib12 article-title: The role of generative adversarial network in medical image analysis: an in-depth survey, ACM Comput publication-title: Far E. Surv. contributor: fullname: Alghamdi – volume: 8 year: 2021 ident: bib7 article-title: Tissue multiplex analyte detection in anatomic pathology - pathways to clinical implementation publication-title: Front. Mol. Biosci. contributor: fullname: Zuraw – volume: 7 year: 2020 ident: bib38 article-title: Histopathologist-level quantification of Ki-67 immunoexpression in gastroenteropancreatic neuroendocrine tumors using semiautomated method publication-title: J. Med. Imaging contributor: fullname: Al-Kadi – start-page: 3368 year: 2018 end-page: 3372 ident: bib30 article-title: Benchmarking of image registration methods for differently stained histological slides publication-title: 2018 25th IEEE International Conference on Image Processing (ICIP) contributor: fullname: Kybic – volume: 13 start-page: 600 year: 2004 end-page: 612 ident: bib34 article-title: Image quality assessment: from error visibility to structural similarity publication-title: IEEE Trans. Image Process. contributor: fullname: Simoncelli – volume: 3 start-page: 1 year: 2008 end-page: 2 ident: bib3 article-title: Hematoxylin and eosin staining of tissue and cell sections publication-title: CSH Protocols contributor: fullname: Zeller – volume: 41 start-page: 212 year: 2013 end-page: 217 ident: bib28 article-title: Expression of Ki-67 as proliferation biomarker in imprint smears of endometrial carcinoma publication-title: Diagn. Cytopathol. contributor: fullname: Athanassiadou – start-page: 632 year: 2023 end-page: 641 ident: bib23 article-title: Adaptive supervised PatchNCE loss for learning H&E-to-IHC stain translation with inconsistent groundtruth image pairs publication-title: Medical Image Computing and Computer Assisted Intervention – MICCAI 2023 contributor: fullname: Kak – start-page: 3 year: 2018 end-page: 19 ident: bib40 article-title: CBAM: convolutional block attention module publication-title: Proceedings of the European Conference on Computer Vision contributor: fullname: Kweon – volume: 30 start-page: 459 year: 2017 end-page: 468 ident: bib4 article-title: Ki-67 in endometrial cancer: scoring optimization and prognostic relevance for window studies publication-title: Mod. Pathol. contributor: fullname: Crosbie – volume: 162 start-page: 383 year: 2023 end-page: 394 ident: bib26 article-title: Endometrial cancer staging subcommittee, FIGO women's cancer committee, FIGO staging of endometrial cancer: 2023 publication-title: Int. J. Gynaecol. Obstet. contributor: fullname: Concin – volume: 149 start-page: 778 year: 2021 end-page: 789 ident: bib2 article-title: Cancer statistics for the year 2020: an overview publication-title: Int. J. Cancer contributor: fullname: Bray – volume: 148 start-page: 15 year: 2022 ident: bib16 article-title: Style transfer in conditional GANs for cross-modality synthesis of brain magnetic resonance images publication-title: Comput. Biol. Med. contributor: fullname: Ling – volume: 12 year: 2022 ident: bib18 article-title: Lung cancer CT image generation from a free-form sketch using style-based pix2pix for data augmentation publication-title: Sci. Rep. contributor: fullname: Fujita – volume: 7 year: 2020 ident: bib19 article-title: Effective immunohistochemistry pathology microscopy image generation using CycleGAN publication-title: Front. Mol. Biosci. contributor: fullname: Chen – volume: 28 start-page: 686 year: 2015 end-page: 694 ident: bib37 article-title: Calculation of the Ki67 index in pancreatic neuroendocrine tumors: a comparative analysis of four counting methodologies publication-title: Mod. Pathol. contributor: fullname: Adsay – year: 2023 ident: bib22 article-title: Breast Cancer Immunohistochemical Image Generation: a Benchmark Dataset and Challenge Review contributor: fullname: Jin – start-page: 1125 year: 2017 end-page: 1134 ident: bib14 article-title: Image-to-image translation with conditional adversarial networks publication-title: 2017 IEEE Conference on Computer Vision and Pattern Recognition contributor: fullname: Efros – volume: 11 start-page: 5727 year: 2020 ident: bib8 article-title: Deep learning-enabled breast cancer hormonal receptor status determination from base-level H&E stains publication-title: Nat. Commun. contributor: fullname: Socher – volume: 60 start-page: 91 year: 2004 end-page: 110 ident: bib29 article-title: Distinctive image features from scale-invariant keypoints publication-title: Int. J. Comput. Vis. contributor: fullname: Lowe – volume: 135 start-page: 55 year: 2011 end-page: 62 ident: bib6 article-title: HER2: biology, detection, and clinical implications publication-title: Arch. Pathol. Lab Med. contributor: fullname: Schiff – volume: 38 start-page: S64 year: 2019 end-page: S74 ident: bib25 article-title: Endometrial carcinoma diagnosis: use of FIGO grading and genomic subcategories in clinical practice: recommendations of the International Society of Gynecological Pathologists publication-title: Int. J. Gynecol. Pathol. contributor: fullname: Gilks – volume: 145 start-page: 14 year: 2022 ident: bib17 article-title: Medical image augmentation for lesion detection using a texture-constrained multichannel progressive GAN publication-title: Comput. Biol. Med. contributor: fullname: Chen – start-page: 1815 year: 2022 end-page: 1824 ident: bib21 article-title: BCI: breast cancer immunohistochemical image generation through pyramid pix2pix publication-title: Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition contributor: fullname: Jin – volume: 1 start-page: 557 year: 2013 end-page: 589 ident: bib35 publication-title: Color Consistency Reliability of LED Systems, Solid State Lighting Technology and Application Series contributor: fullname: Maxime – start-page: 1630 year: 2022 end-page: 1637 ident: bib24 article-title: Unpaired multi-domain stain transfer for kidney histopathological images publication-title: Proceedings of the AAAI Conference on Artificial Intelligence contributor: fullname: Zhang – volume: 145 start-page: 14 year: 2022 ident: 10.1016/j.compbiomed.2024.108046_bib17 article-title: Medical image augmentation for lesion detection using a texture-constrained multichannel progressive GAN publication-title: Comput. Biol. Med. doi: 10.1016/j.compbiomed.2022.105444 contributor: fullname: Guan – volume: 7 issue: 1 year: 2020 ident: 10.1016/j.compbiomed.2024.108046_bib38 article-title: Histopathologist-level quantification of Ki-67 immunoexpression in gastroenteropancreatic neuroendocrine tumors using semiautomated method publication-title: J. Med. Imaging doi: 10.1117/1.JMI.7.1.012704 contributor: fullname: Saadeh – volume: 7 start-page: 183 year: 2020 ident: 10.1016/j.compbiomed.2024.108046_bib11 article-title: Predict Ki-67 positive cells in H&E-Stained images using deep learning independently from IHC-stained images publication-title: Front. Mol. Biosci. doi: 10.3389/fmolb.2020.00183 contributor: fullname: Liu – volume: 11 start-page: 5727 issue: 1 year: 2020 ident: 10.1016/j.compbiomed.2024.108046_bib8 article-title: Deep learning-enabled breast cancer hormonal receptor status determination from base-level H&E stains publication-title: Nat. Commun. doi: 10.1038/s41467-020-19334-3 contributor: fullname: Naik – volume: 38 start-page: S64 year: 2019 ident: 10.1016/j.compbiomed.2024.108046_bib25 article-title: Endometrial carcinoma diagnosis: use of FIGO grading and genomic subcategories in clinical practice: recommendations of the International Society of Gynecological Pathologists publication-title: Int. J. Gynecol. Pathol. doi: 10.1097/PGP.0000000000000518 contributor: fullname: Soslow – start-page: 2223 year: 2017 ident: 10.1016/j.compbiomed.2024.108046_bib13 article-title: Unpaired image-to-image translation using cycle-consistent adversarial networks contributor: fullname: Zhu – volume: 7 year: 2020 ident: 10.1016/j.compbiomed.2024.108046_bib19 article-title: Effective immunohistochemistry pathology microscopy image generation using CycleGAN publication-title: Front. Mol. Biosci. doi: 10.3389/fmolb.2020.571180 contributor: fullname: Xu – volume: 3 start-page: 1 issue: 5 year: 2008 ident: 10.1016/j.compbiomed.2024.108046_bib3 article-title: Hematoxylin and eosin staining of tissue and cell sections publication-title: CSH Protocols contributor: fullname: Fischer – volume: 40 start-page: 1977 issue: 8 year: 2021 ident: 10.1016/j.compbiomed.2024.108046_bib20 article-title: Unpaired stain transfer using pathology-consistent constrained generative adversarial networks publication-title: IEEE Trans. Med. Imag. doi: 10.1109/TMI.2021.3069874 contributor: fullname: Liu – volume: 135 start-page: 55 issue: 1 year: 2011 ident: 10.1016/j.compbiomed.2024.108046_bib6 article-title: HER2: biology, detection, and clinical implications publication-title: Arch. Pathol. Lab Med. doi: 10.5858/2010-0454-RAR.1 contributor: fullname: Gutierrez – start-page: 7132 year: 2018 ident: 10.1016/j.compbiomed.2024.108046_bib39 article-title: Squeeze-and-excitation networks contributor: fullname: Hu – start-page: 1125 year: 2017 ident: 10.1016/j.compbiomed.2024.108046_bib14 article-title: Image-to-image translation with conditional adversarial networks contributor: fullname: Isola – start-page: 3 year: 2018 ident: 10.1016/j.compbiomed.2024.108046_bib40 article-title: CBAM: convolutional block attention module contributor: fullname: Woo – volume: 24 start-page: 381 issue: 6 year: 1981 ident: 10.1016/j.compbiomed.2024.108046_bib31 article-title: Random sample consensus: a paradigm for model fitting with applications to image analysis and automated cartography publication-title: Commun. ACM doi: 10.1145/358669.358692 contributor: fullname: Fischler – volume: 12 year: 2022 ident: 10.1016/j.compbiomed.2024.108046_bib18 article-title: Lung cancer CT image generation from a free-form sketch using style-based pix2pix for data augmentation publication-title: Sci. Rep. doi: 10.1038/s41598-022-16861-5 contributor: fullname: Toda – volume: 13 start-page: 600 issue: 4 year: 2004 ident: 10.1016/j.compbiomed.2024.108046_bib34 article-title: Image quality assessment: from error visibility to structural similarity publication-title: IEEE Trans. Image Process. doi: 10.1109/TIP.2003.819861 contributor: fullname: Wang – start-page: 1630 year: 2022 ident: 10.1016/j.compbiomed.2024.108046_bib24 article-title: Unpaired multi-domain stain transfer for kidney histopathological images contributor: fullname: Lin – start-page: 13713 year: 2021 ident: 10.1016/j.compbiomed.2024.108046_bib41 article-title: Coordinate attention for efficient mobile network design contributor: fullname: Hou – volume: 8 year: 2021 ident: 10.1016/j.compbiomed.2024.108046_bib7 article-title: Tissue multiplex analyte detection in anatomic pathology - pathways to clinical implementation publication-title: Front. Mol. Biosci. doi: 10.3389/fmolb.2021.672531 contributor: fullname: Wharton – volume: 38 start-page: 382 issue: 5 year: 2010 ident: 10.1016/j.compbiomed.2024.108046_bib9 article-title: Cancer nucleus: morphology and beyond publication-title: Diagn. Cytopathol. doi: 10.1002/dc.21234 contributor: fullname: Dey – start-page: 1815 year: 2022 ident: 10.1016/j.compbiomed.2024.108046_bib21 article-title: BCI: breast cancer immunohistochemical image generation through pyramid pix2pix contributor: fullname: Liu – volume: 28 start-page: 686 issue: 5 year: 2015 ident: 10.1016/j.compbiomed.2024.108046_bib37 article-title: Calculation of the Ki67 index in pancreatic neuroendocrine tumors: a comparative analysis of four counting methodologies publication-title: Mod. Pathol. doi: 10.1038/modpathol.2014.156 contributor: fullname: Reid – volume: 30 start-page: 459 issue: 3 year: 2017 ident: 10.1016/j.compbiomed.2024.108046_bib4 article-title: Ki-67 in endometrial cancer: scoring optimization and prognostic relevance for window studies publication-title: Mod. Pathol. doi: 10.1038/modpathol.2016.203 contributor: fullname: Kitson – volume: 148 start-page: 15 year: 2022 ident: 10.1016/j.compbiomed.2024.108046_bib16 article-title: Style transfer in conditional GANs for cross-modality synthesis of brain magnetic resonance images publication-title: Comput. Biol. Med. doi: 10.1016/j.compbiomed.2022.105928 contributor: fullname: Qin – volume: 162 start-page: 383 issue: 2 year: 2023 ident: 10.1016/j.compbiomed.2024.108046_bib26 article-title: Endometrial cancer staging subcommittee, FIGO women's cancer committee, FIGO staging of endometrial cancer: 2023 publication-title: Int. J. Gynaecol. Obstet. doi: 10.1002/ijgo.14923 contributor: fullname: Berek – volume: 26 start-page: 98 issue: 1 year: 2009 ident: 10.1016/j.compbiomed.2024.108046_bib36 article-title: Mean squared error: love it or leave it? A new look at signal fidelity measures publication-title: IEEE Signal Process. Mag. doi: 10.1109/MSP.2008.930649 contributor: fullname: Wang – volume: 9 start-page: 671 issue: 7 year: 2012 ident: 10.1016/j.compbiomed.2024.108046_bib32 article-title: NIH Image to ImageJ: 25 years of image analysis publication-title: Nat. Methods doi: 10.1038/nmeth.2089 contributor: fullname: Schneider – volume: 25 start-page: 71 issue: 2 year: 2018 ident: 10.1016/j.compbiomed.2024.108046_bib27 article-title: Pathologic staging of endometrial carcinomas: selected areas of difficulty publication-title: Adv. Anat. Pathol. doi: 10.1097/PAP.0000000000000182 contributor: fullname: McCluggage – volume: 55 start-page: 96 issue: 5 year: 2022 ident: 10.1016/j.compbiomed.2024.108046_bib12 article-title: The role of generative adversarial network in medical image analysis: an in-depth survey, ACM Comput publication-title: Far E. Surv. contributor: fullname: Alamir – volume: 157 start-page: 17 year: 2023 ident: 10.1016/j.compbiomed.2024.108046_bib15 article-title: BTMF-GAN: a multi-modal MRI fusion generative adversarial network for brain tumors publication-title: Comput. Biol. Med. doi: 10.1016/j.compbiomed.2023.106769 contributor: fullname: Liu – volume: 1 start-page: 557 year: 2013 ident: 10.1016/j.compbiomed.2024.108046_bib35 contributor: fullname: Bataillou – year: 2023 ident: 10.1016/j.compbiomed.2024.108046_bib22 contributor: fullname: Zhu – volume: 60 start-page: 91 issue: 2 year: 2004 ident: 10.1016/j.compbiomed.2024.108046_bib29 article-title: Distinctive image features from scale-invariant keypoints publication-title: Int. J. Comput. Vis. doi: 10.1023/B:VISI.0000029664.99615.94 contributor: fullname: Lowe – volume: 74 start-page: 1445 year: 1996 ident: 10.1016/j.compbiomed.2024.108046_bib5 article-title: Immunohistochemical determination of oestrogen receptor: comparison of different methods of assessment of staining and correlation with clinical outcome of breast cancer patients publication-title: Br. J. Cancer doi: 10.1038/bjc.1996.563 contributor: fullname: Barnes – start-page: 770 year: 2016 ident: 10.1016/j.compbiomed.2024.108046_bib33 article-title: Deep residual learning for image recognition contributor: fullname: He – volume: 399 start-page: 1412 issue: 10333 year: 2022 ident: 10.1016/j.compbiomed.2024.108046_bib1 article-title: Endometrial cancer publication-title: Lancet doi: 10.1016/S0140-6736(22)00323-3 contributor: fullname: Crosbie – volume: 41 start-page: 212 issue: 3 year: 2013 ident: 10.1016/j.compbiomed.2024.108046_bib28 article-title: Expression of Ki-67 as proliferation biomarker in imprint smears of endometrial carcinoma publication-title: Diagn. Cytopathol. doi: 10.1002/dc.21825 contributor: fullname: Kosmas – volume: 2018 year: 2018 ident: 10.1016/j.compbiomed.2024.108046_bib10 article-title: Multifeature quantification of nuclear properties from images of H&E-Stained biopsy material for investigating changes in nuclear structure with advancing CIN grade publication-title: J. Healthc. Eng. doi: 10.1155/2018/6358189 contributor: fullname: Konstandinou – volume: 149 start-page: 778 issue: 4 year: 2021 ident: 10.1016/j.compbiomed.2024.108046_bib2 article-title: Cancer statistics for the year 2020: an overview publication-title: Int. J. Cancer doi: 10.1002/ijc.33588 contributor: fullname: Ferlay – start-page: 632 year: 2023 ident: 10.1016/j.compbiomed.2024.108046_bib23 article-title: Adaptive supervised PatchNCE loss for learning H&E-to-IHC stain translation with inconsistent groundtruth image pairs contributor: fullname: Li – start-page: 3368 year: 2018 ident: 10.1016/j.compbiomed.2024.108046_bib30 article-title: Benchmarking of image registration methods for differently stained histological slides contributor: fullname: Borovec |
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SubjectTerms | Breast cancer Cancer therapies Datasets Deep learning Dual-scale feature fusion block Endometrial cancer Endometrium Evaluation Generative adversarial networks Image processing Image quality Immunohistochemical image Immunohistochemistry Localization Medical imaging Pathology Similarity Stain transfer Staining Uterine cancer Virtual networks |
Title | DSFF-GAN: A novel stain transfer network for generating immunohistochemical image of endometrial cancer |
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