Detection of soil organic matter from laser-induced breakdown spectroscopy (LIBS) and mid-infrared spectroscopy (FTIR-ATR) coupled with multivariate techniques

Spectroscopy is a useful method for soil monitoring because of its environmental friendliness, and its ability to produce rapid, nondestructive, simultaneous multi-element analysis. In this work, data fusion strategies for laser-induced breakdown spectroscopy (LIBS) and attenuated total reflectance...

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Published inGeoderma Vol. 355; p. 113905
Main Authors Xu, Xuebin, Du, Changwen, Ma, Fei, Shen, Yazhen, Wu, Ke, Liang, Dong, Zhou, Jianmin
Format Journal Article
LanguageEnglish
Published Elsevier B.V 01.12.2019
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Abstract Spectroscopy is a useful method for soil monitoring because of its environmental friendliness, and its ability to produce rapid, nondestructive, simultaneous multi-element analysis. In this work, data fusion strategies for laser-induced breakdown spectroscopy (LIBS) and attenuated total reflectance Fourier-transform mid-infrared spectroscopy (FTIR-ATR), as well as a combination of multivariate calibration methods were investigated for prediction of soil organic matter (SOM) content. The root mean square error (RMSE) and residual prediction deviation (RPD) of the calibration and validation sets, systematic error, and residual assessment, were applied to evaluate the robustness and accuracy of these predictions. The results of a principal component analysis (PCA) indicated that baseline wander present in the spectral data could be effectively removed using morphological weighted penalized least squares (MPLS) and wavelet transform (WT) algorithms. The quantitative prediction ability of SOM content by a partial least squares regression (PLSR) model could be improved using principal component weighted mean (PCWM) and Euclidean distance weighted mean (EDWM) algorithms applied to parallel LIBS spectra. The prediction ability of SOM content was dramatically improved using mid-level data fusion based on the concatenation of latent variables of LIBS and FTIR-ATR spectra obtained by partial least squares algorithm. The considerable prediction accuracy and robustness were achieved using the PLSR model (RV2 = 0.792, RMSEV = 1.76 g kg−1, and RPDV = 2.16), the support vector regression (SVR) model (RV2 = 0.811, RMSEV = 1.68 g kg−1, and RPDV = 2.27), and the artificial neural network (ANN) model (RV2 = 0.830, RMSEV = 1.60 g kg−1, and RPDV = 2.39). The findings from this work suggest that the use of LIBS and FTIR-ATR spectra in combination with multivariate calibration can be a simple, fast, and nondestructive approach to monitor SOM. This strategy is potentially of great significance in the evaluation of soil fertility, the management of soil nutrients, and in guiding the agricultural production of precision agriculture. •Soil atomic spectra of laser-induced breakdown spectroscopy•Mid-infrared attenuated total reflectance spectra of soil•Fusions of soil molecular spectra and atomic spectra•Prediction of soil organic matter through optimized data fusion strategy and chemometric method
AbstractList Spectroscopy is a useful method for soil monitoring because of its environmental friendliness, and its ability to produce rapid, nondestructive, simultaneous multi-element analysis. In this work, data fusion strategies for laser-induced breakdown spectroscopy (LIBS) and attenuated total reflectance Fourier-transform mid-infrared spectroscopy (FTIR-ATR), as well as a combination of multivariate calibration methods were investigated for prediction of soil organic matter (SOM) content. The root mean square error (RMSE) and residual prediction deviation (RPD) of the calibration and validation sets, systematic error, and residual assessment, were applied to evaluate the robustness and accuracy of these predictions. The results of a principal component analysis (PCA) indicated that baseline wander present in the spectral data could be effectively removed using morphological weighted penalized least squares (MPLS) and wavelet transform (WT) algorithms. The quantitative prediction ability of SOM content by a partial least squares regression (PLSR) model could be improved using principal component weighted mean (PCWM) and Euclidean distance weighted mean (EDWM) algorithms applied to parallel LIBS spectra. The prediction ability of SOM content was dramatically improved using mid-level data fusion based on the concatenation of latent variables of LIBS and FTIR-ATR spectra obtained by partial least squares algorithm. The considerable prediction accuracy and robustness were achieved using the PLSR model (RV2 = 0.792, RMSEV = 1.76 g kg−1, and RPDV = 2.16), the support vector regression (SVR) model (RV2 = 0.811, RMSEV = 1.68 g kg−1, and RPDV = 2.27), and the artificial neural network (ANN) model (RV2 = 0.830, RMSEV = 1.60 g kg−1, and RPDV = 2.39). The findings from this work suggest that the use of LIBS and FTIR-ATR spectra in combination with multivariate calibration can be a simple, fast, and nondestructive approach to monitor SOM. This strategy is potentially of great significance in the evaluation of soil fertility, the management of soil nutrients, and in guiding the agricultural production of precision agriculture.
Spectroscopy is a useful method for soil monitoring because of its environmental friendliness, and its ability to produce rapid, nondestructive, simultaneous multi-element analysis. In this work, data fusion strategies for laser-induced breakdown spectroscopy (LIBS) and attenuated total reflectance Fourier-transform mid-infrared spectroscopy (FTIR-ATR), as well as a combination of multivariate calibration methods were investigated for prediction of soil organic matter (SOM) content. The root mean square error (RMSE) and residual prediction deviation (RPD) of the calibration and validation sets, systematic error, and residual assessment, were applied to evaluate the robustness and accuracy of these predictions. The results of a principal component analysis (PCA) indicated that baseline wander present in the spectral data could be effectively removed using morphological weighted penalized least squares (MPLS) and wavelet transform (WT) algorithms. The quantitative prediction ability of SOM content by a partial least squares regression (PLSR) model could be improved using principal component weighted mean (PCWM) and Euclidean distance weighted mean (EDWM) algorithms applied to parallel LIBS spectra. The prediction ability of SOM content was dramatically improved using mid-level data fusion based on the concatenation of latent variables of LIBS and FTIR-ATR spectra obtained by partial least squares algorithm. The considerable prediction accuracy and robustness were achieved using the PLSR model (RV2 = 0.792, RMSEV = 1.76 g kg−1, and RPDV = 2.16), the support vector regression (SVR) model (RV2 = 0.811, RMSEV = 1.68 g kg−1, and RPDV = 2.27), and the artificial neural network (ANN) model (RV2 = 0.830, RMSEV = 1.60 g kg−1, and RPDV = 2.39). The findings from this work suggest that the use of LIBS and FTIR-ATR spectra in combination with multivariate calibration can be a simple, fast, and nondestructive approach to monitor SOM. This strategy is potentially of great significance in the evaluation of soil fertility, the management of soil nutrients, and in guiding the agricultural production of precision agriculture. •Soil atomic spectra of laser-induced breakdown spectroscopy•Mid-infrared attenuated total reflectance spectra of soil•Fusions of soil molecular spectra and atomic spectra•Prediction of soil organic matter through optimized data fusion strategy and chemometric method
ArticleNumber 113905
Author Ma, Fei
Wu, Ke
Xu, Xuebin
Liang, Dong
Zhou, Jianmin
Shen, Yazhen
Du, Changwen
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  organization: The State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, East Beijing Road 71, Nanjing 210008, China
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  givenname: Changwen
  surname: Du
  fullname: Du, Changwen
  email: chwdu@issas.ac.cn
  organization: The State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, East Beijing Road 71, Nanjing 210008, China
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  givenname: Fei
  surname: Ma
  fullname: Ma, Fei
  organization: The State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, East Beijing Road 71, Nanjing 210008, China
– sequence: 4
  givenname: Yazhen
  surname: Shen
  fullname: Shen, Yazhen
  organization: The State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, East Beijing Road 71, Nanjing 210008, China
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  surname: Wu
  fullname: Wu, Ke
  organization: The State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, East Beijing Road 71, Nanjing 210008, China
– sequence: 6
  givenname: Dong
  surname: Liang
  fullname: Liang, Dong
  organization: The State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, East Beijing Road 71, Nanjing 210008, China
– sequence: 7
  givenname: Jianmin
  surname: Zhou
  fullname: Zhou, Jianmin
  organization: The State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, East Beijing Road 71, Nanjing 210008, China
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FTIR-ATR spectroscopy
Laser-induced breakdown spectroscopy
Spectral preprocessing
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Snippet Spectroscopy is a useful method for soil monitoring because of its environmental friendliness, and its ability to produce rapid, nondestructive, simultaneous...
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SubjectTerms algorithms
atomic absorption spectrometry
calibration
Data fusion
Fourier transform infrared spectroscopy
FTIR-ATR spectroscopy
Laser-induced breakdown spectroscopy
least squares
monitoring
neural networks
precision agriculture
prediction
principal component analysis
reflectance spectroscopy
soil
soil fertility
soil nutrients
soil organic matter
spectral analysis
Spectral preprocessing
wavelet
Title Detection of soil organic matter from laser-induced breakdown spectroscopy (LIBS) and mid-infrared spectroscopy (FTIR-ATR) coupled with multivariate techniques
URI https://dx.doi.org/10.1016/j.geoderma.2019.113905
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Volume 355
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