Soil aluminum oxides determine biological nitrogen fixation and diazotrophic communities across major types of paddy soils in China

Biological nitrogen fixation (BNF) contributed greatly in maintaining the fertility of paddy soils without the application of chemical fertilizers for thousands of years. However, factors affecting the BNF and composition of diazotrophs in paddy soils across large geographic scales are still largely...

Full description

Saved in:
Bibliographic Details
Published inSoil biology & biochemistry Vol. 131; pp. 81 - 89
Main Authors Wang, Xiaojie, Liu, Benjuan, Ma, Jing, Zhang, Yanhui, Hu, Tianlong, Zhang, Heng, Feng, Yucheng, Pan, Hongli, Xu, Zhenwen, Liu, Gang, Lin, Xingwu, Zhu, Jianguo, Bei, Qicheng, Xie, Zubin
Format Journal Article
LanguageEnglish
Published Elsevier Ltd 01.04.2019
Subjects
Online AccessGet full text

Cover

Loading…
Abstract Biological nitrogen fixation (BNF) contributed greatly in maintaining the fertility of paddy soils without the application of chemical fertilizers for thousands of years. However, factors affecting the BNF and composition of diazotrophs in paddy soils across large geographic scales are still largely unknown. In this study, the field-based 15N2 labeling technique and nifH gene high-throughput sequencing were applied to four types of paddy soils collected from northeast to southwest China, representing major rice-growing areas. Results showed that the BNF amount had distinct geographical patterns and ranged from 2.2 ± 0.5 to 20.1 ± 3.7 kg N ha−1 during 42 days 15N2 labeling period, which was positively correlated with the abundance of Nostocales species. Among the soil properties analyzed, the contents of amorphous aluminum oxides may play a key role in determining the BNF amount and major N2-fixers across all paddy soils using a random forest model. Overall, our study demonstrates the potential biotoxic effects of aluminum oxides on the BNF in paddy soils in southern China and may has important implications for the enhancement of BNF in acidic Ultisols and Oxisols. •Biological nitrogen fixation (BNF) of paddy soils had distinct geographical patterns across Northeast to Southwest of China.•BNF amount was positively correlated with the abundance of some Nostocales species.•Soil amorphous aluminum oxide was found to be key factor affecting the BNF and diazotrophic communities.
AbstractList Biological nitrogen fixation (BNF) contributed greatly in maintaining the fertility of paddy soils without the application of chemical fertilizers for thousands of years. However, factors affecting the BNF and composition of diazotrophs in paddy soils across large geographic scales are still largely unknown. In this study, the field-based 15N2 labeling technique and nifH gene high-throughput sequencing were applied to four types of paddy soils collected from northeast to southwest China, representing major rice-growing areas. Results showed that the BNF amount had distinct geographical patterns and ranged from 2.2 ± 0.5 to 20.1 ± 3.7 kg N ha−1 during 42 days 15N2 labeling period, which was positively correlated with the abundance of Nostocales species. Among the soil properties analyzed, the contents of amorphous aluminum oxides may play a key role in determining the BNF amount and major N2-fixers across all paddy soils using a random forest model. Overall, our study demonstrates the potential biotoxic effects of aluminum oxides on the BNF in paddy soils in southern China and may has important implications for the enhancement of BNF in acidic Ultisols and Oxisols. •Biological nitrogen fixation (BNF) of paddy soils had distinct geographical patterns across Northeast to Southwest of China.•BNF amount was positively correlated with the abundance of some Nostocales species.•Soil amorphous aluminum oxide was found to be key factor affecting the BNF and diazotrophic communities.
Biological nitrogen fixation (BNF) contributed greatly in maintaining the fertility of paddy soils without the application of chemical fertilizers for thousands of years. However, factors affecting the BNF and composition of diazotrophs in paddy soils across large geographic scales are still largely unknown. In this study, the field-based 15N2 labeling technique and nifH gene high-throughput sequencing were applied to four types of paddy soils collected from northeast to southwest China, representing major rice-growing areas. Results showed that the BNF amount had distinct geographical patterns and ranged from 2.2 ± 0.5 to 20.1 ± 3.7 kg N ha−1 during 42 days 15N2 labeling period, which was positively correlated with the abundance of Nostocales species. Among the soil properties analyzed, the contents of amorphous aluminum oxides may play a key role in determining the BNF amount and major N2-fixers across all paddy soils using a random forest model. Overall, our study demonstrates the potential biotoxic effects of aluminum oxides on the BNF in paddy soils in southern China and may has important implications for the enhancement of BNF in acidic Ultisols and Oxisols.
Author Liu, Gang
Zhu, Jianguo
Lin, Xingwu
Feng, Yucheng
Zhang, Yanhui
Liu, Benjuan
Ma, Jing
Pan, Hongli
Xu, Zhenwen
Xie, Zubin
Wang, Xiaojie
Hu, Tianlong
Zhang, Heng
Bei, Qicheng
Author_xml – sequence: 1
  givenname: Xiaojie
  surname: Wang
  fullname: Wang, Xiaojie
  organization: State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, 210008, China
– sequence: 2
  givenname: Benjuan
  surname: Liu
  fullname: Liu, Benjuan
  organization: State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, 210008, China
– sequence: 3
  givenname: Jing
  surname: Ma
  fullname: Ma, Jing
  organization: State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, 210008, China
– sequence: 4
  givenname: Yanhui
  surname: Zhang
  fullname: Zhang, Yanhui
  organization: State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, 210008, China
– sequence: 5
  givenname: Tianlong
  surname: Hu
  fullname: Hu, Tianlong
  organization: State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, 210008, China
– sequence: 6
  givenname: Heng
  surname: Zhang
  fullname: Zhang, Heng
  organization: Shanghai Center for Plant Stress Biology, CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, 201602, China
– sequence: 7
  givenname: Yucheng
  surname: Feng
  fullname: Feng, Yucheng
  organization: Department of Crop, Soil and Environmental Sciences, Auburn University, Auburn, AL, 36849, USA
– sequence: 8
  givenname: Hongli
  surname: Pan
  fullname: Pan, Hongli
  organization: Institute of Forest Ecology, Sichuan Academy of Forestry, Chengdu, 610081, China
– sequence: 9
  givenname: Zhenwen
  surname: Xu
  fullname: Xu, Zhenwen
  organization: College of Urban and Environmental Sciences, Changchun Normal University, Changchun, 130032, China
– sequence: 10
  givenname: Gang
  surname: Liu
  fullname: Liu, Gang
  organization: State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, 210008, China
– sequence: 11
  givenname: Xingwu
  surname: Lin
  fullname: Lin, Xingwu
  organization: State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, 210008, China
– sequence: 12
  givenname: Jianguo
  surname: Zhu
  fullname: Zhu, Jianguo
  organization: State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, 210008, China
– sequence: 13
  givenname: Qicheng
  orcidid: 0000-0002-5712-5440
  surname: Bei
  fullname: Bei, Qicheng
  email: qcbei@issas.ac.cn
  organization: State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, 210008, China
– sequence: 14
  givenname: Zubin
  surname: Xie
  fullname: Xie, Zubin
  email: zbxie@issas.ac.cn
  organization: State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, 210008, China
BookMark eNqFkEFv1DAQhS1UJLaFn4DkI5cEO4lJIg4IrSggVeIAnK2xPWlnldjBdlCXK38cb7cnLj2NNPPe07zvkl344JGx11LUUsh3bw91CjQbCnUj5FDLphbN8Izt5NCPVds1wwXbCdEOlehl_4JdpnQQQjRKtjv293uxcpi3hfy28HBPDhN3mDGWDfKSOodbsjBzTzmGW_R8onvIFDwH77gj-BPKYb0jy21Ylq3oqGSAjSElvsAhRJ6Pa1mFia_g3JGf_k2cPN_fkYeX7PkEc8JXj_OK_bz-9GP_pbr59vnr_uNNZUuJXCllrJKmlaOEXiIo4QSMg1GtMN1QCo4AICY0prXN5NxYCtqpXB32Rpm2vWJvzrlrDL82TFkvlCzOM3gMW9KNHEbVdZ1QRarO0ocSESe9RlogHrUU-gRdH_QjdH2CrmWjC_Tie_-fz1J-gJUj0Pyk-8PZjYXCb8KokyX0Fh1FtFm7QE8k_ANv5ad1
CitedBy_id crossref_primary_10_32604_phyton_2024_055052
crossref_primary_10_1166_jbmb_2021_2048
crossref_primary_10_1016_j_scitotenv_2023_169005
crossref_primary_10_1007_s11104_021_05093_7
crossref_primary_10_1007_s11104_022_05515_0
crossref_primary_10_1016_j_scitotenv_2020_137056
crossref_primary_10_1016_j_pedsph_2023_09_002
crossref_primary_10_1016_j_apsoil_2021_104266
crossref_primary_10_1007_s42729_020_00364_1
crossref_primary_10_3389_fenvs_2020_00105
crossref_primary_10_1016_j_scitotenv_2022_154418
crossref_primary_10_1007_s11104_023_06003_9
crossref_primary_10_1007_s00248_020_01591_w
crossref_primary_10_1016_j_agee_2023_108591
crossref_primary_10_1016_j_watres_2021_117484
crossref_primary_10_1016_j_biortech_2021_125469
crossref_primary_10_1099_ijsem_0_004026
crossref_primary_10_1016_j_soilbio_2021_108220
crossref_primary_10_1007_s42729_023_01286_4
crossref_primary_10_1016_j_agee_2021_107535
crossref_primary_10_1016_j_jhazmat_2022_130697
crossref_primary_10_1016_j_pedsph_2023_12_007
crossref_primary_10_1128_msystems_01047_21
crossref_primary_10_2139_ssrn_4141110
crossref_primary_10_1007_s00374_020_01492_7
crossref_primary_10_1016_j_geoderma_2021_114969
crossref_primary_10_1007_s11104_022_05654_4
crossref_primary_10_1016_j_apsoil_2022_104571
crossref_primary_10_1186_s13568_021_01241_5
crossref_primary_10_1016_j_pedsph_2022_05_001
crossref_primary_10_1016_j_apsoil_2023_105102
crossref_primary_10_1016_j_apgeochem_2021_104969
crossref_primary_10_3389_fmicb_2022_965293
crossref_primary_10_1016_j_scitotenv_2023_161983
crossref_primary_10_1093_mtomcs_mfad069
crossref_primary_10_1016_j_envpol_2019_113209
crossref_primary_10_1016_j_jhazmat_2023_132544
crossref_primary_10_1016_j_apsoil_2020_103873
crossref_primary_10_1021_acs_jafc_2c04467
crossref_primary_10_1016_j_chemosphere_2021_131565
crossref_primary_10_1016_j_scitotenv_2020_137633
crossref_primary_10_1007_s00248_023_02261_3
crossref_primary_10_1016_j_envres_2024_118923
crossref_primary_10_1080_00380768_2021_1888629
crossref_primary_10_1016_j_ecolind_2024_112087
crossref_primary_10_3389_fmicb_2020_01861
crossref_primary_10_1021_acs_est_4c05242
crossref_primary_10_3390_ijerph19148707
crossref_primary_10_1007_s11368_024_03837_3
crossref_primary_10_3390_agriculture14020211
crossref_primary_10_1016_j_scitotenv_2023_162663
crossref_primary_10_1007_s00374_020_01497_2
crossref_primary_10_1093_ismeco_ycae160
Cites_doi 10.15666/aeer/0502_103113
10.1073/pnas.0507535103
10.1016/j.soilbio.2010.06.015
10.1098/rspb.1939.0014
10.1111/sum.12096
10.1073/pnas.1215210110
10.4141/cjss77-024
10.1016/S0176-1617(11)81714-1
10.1007/s11104-012-1473-3
10.1128/mBio.00592-13
10.1126/science.aap9516
10.1007/BF00015918
10.1023/A:1024175307238
10.1073/pnas.1320646111
10.3389/fmicb.2013.00291
10.1038/nmeth.2604
10.1021/cr400641x
10.1007/s11104-009-9970-8
10.1046/j.1469-8137.2002.00534.x
10.1016/j.apsoil.2009.02.008
10.1007/BF02884250
10.1007/s002489900032
10.1016/j.apsoil.2007.11.008
10.1007/s00248-008-9403-x
10.1080/00103629009368144
10.1016/j.soilbio.2013.01.008
10.1016/j.soilbio.2016.12.003
10.1080/00380768.1977.10433048
10.1038/nmeth.f.303
10.2136/sssaj2001.65178x
10.1128/AEM.67.5.2255-2262.2001
10.1081/CSS-200059104
10.3389/fmicb.2015.00982
10.2136/sssaj1982.03615995004600020016x
10.1111/j.1462-2920.2005.00841.x
10.1128/AEM.39.3.554-558.1980
10.1016/j.still.2014.09.020
10.1007/s002489900183
10.1080/00380768.1982.10432396
10.1104/pp.68.1.48
10.1126/science.1186120
10.1007/BF00011309
10.1093/bioinformatics/btr381
10.1093/bioinformatics/btt593
10.1016/S0923-2508(00)01172-4
10.1016/j.chemosphere.2011.08.036
10.1016/j.soilbio.2016.12.010
10.1038/ncomms10541
10.1023/A:1010933404324
10.1128/AEM.70.2.973-983.2004
10.1128/AEM.00335-09
ContentType Journal Article
Copyright 2019 Elsevier Ltd
Copyright_xml – notice: 2019 Elsevier Ltd
DBID AAYXX
CITATION
7S9
L.6
DOI 10.1016/j.soilbio.2018.12.028
DatabaseName CrossRef
AGRICOLA
AGRICOLA - Academic
DatabaseTitle CrossRef
AGRICOLA
AGRICOLA - Academic
DatabaseTitleList
AGRICOLA
DeliveryMethod fulltext_linktorsrc
Discipline Chemistry
Agriculture
EISSN 1879-3428
EndPage 89
ExternalDocumentID 10_1016_j_soilbio_2018_12_028
S0038071718304462
GeographicLocations China
GeographicLocations_xml – name: China
GroupedDBID --K
--M
-~X
.~1
0R~
123
1B1
1RT
1~.
1~5
4.4
457
4G.
53G
5VS
7-5
71M
8P~
9JM
AABNK
AABVA
AACTN
AAEDT
AAEDW
AAIAV
AAIKJ
AAKOC
AALCJ
AALRI
AAOAW
AAQFI
AAQXK
AATLK
AAXUO
ABEFU
ABFNM
ABFYP
ABGRD
ABGSF
ABJNI
ABLST
ABMAC
ABUDA
ABXDB
ABYKQ
ACDAQ
ACGFS
ACIUM
ACRLP
ADBBV
ADEZE
ADMUD
ADQTV
ADUVX
AEBSH
AEHWI
AEKER
AENEX
AEQOU
AFKWA
AFTJW
AFXIZ
AGHFR
AGRDE
AGUBO
AGYEJ
AHEUO
AHHHB
AIEXJ
AIKHN
AITUG
AJBFU
AJOXV
AKIFW
ALMA_UNASSIGNED_HOLDINGS
AMFUW
AMRAJ
ASPBG
AVWKF
AXJTR
AZFZN
BKOJK
BLECG
BLXMC
CBWCG
CNWQP
CS3
DOVZS
DU5
EBS
EFJIC
EFLBG
EJD
EO8
EO9
EP2
EP3
F5P
FDB
FEDTE
FGOYB
FIRID
FNPLU
FYGXN
G-2
G-Q
GBLVA
HLV
HLW
HMA
HMC
HMG
HVGLF
HZ~
IHE
J1W
K-O
KCYFY
KOM
LW9
LX3
LY3
LY9
M41
MO0
N9A
NHB
O-L
O9-
OAUVE
OHT
OZT
P-8
P-9
P2P
PC.
Q38
R2-
RIG
ROL
RPZ
SAB
SBG
SCU
SDF
SDG
SDP
SEN
SEP
SES
SEW
SIN
SPCBC
SSA
SSJ
SSU
SSZ
T5K
TN5
TWZ
WUQ
XPP
Y6R
ZMT
~02
~G-
~KM
AAHBH
AATTM
AAXKI
AAYWO
AAYXX
ABWVN
ACRPL
ACVFH
ADCNI
ADNMO
AEGFY
AEIPS
AEUPX
AFJKZ
AFPUW
AGCQF
AGQPQ
AGRNS
AIGII
AIIUN
AKBMS
AKRWK
AKYEP
ANKPU
APXCP
BNPGV
CITATION
SSH
7S9
L.6
ID FETCH-LOGICAL-c342t-55bc51b3191a71ea50d0a98b530b480039aaa0febb3c2fdd9513cf530de7b5b33
IEDL.DBID .~1
ISSN 0038-0717
IngestDate Fri Jul 11 15:49:31 EDT 2025
Tue Jul 01 03:20:00 EDT 2025
Thu Apr 24 23:07:24 EDT 2025
Fri Feb 23 02:23:27 EST 2024
IsPeerReviewed true
IsScholarly true
Keywords CEC
Fed, Ald, and Mnd
AP and AK
C/N
Diazotrophs
Feo, Alo, and Mno
Biological nitrogen fixation
AFe, AMn, ACu, AZn and AMo
Paddy soil
SOM
15N2-labeling
TFe, TMn, TCu, TZn and TMo
TC, TN, TP, TK, TNa, TCa and TMg
Aluminum oxides
Language English
LinkModel DirectLink
MergedId FETCHMERGED-LOGICAL-c342t-55bc51b3191a71ea50d0a98b530b480039aaa0febb3c2fdd9513cf530de7b5b33
Notes ObjectType-Article-1
SourceType-Scholarly Journals-1
ObjectType-Feature-2
content type line 23
ORCID 0000-0002-5712-5440
PQID 2189544405
PQPubID 24069
PageCount 9
ParticipantIDs proquest_miscellaneous_2189544405
crossref_primary_10_1016_j_soilbio_2018_12_028
crossref_citationtrail_10_1016_j_soilbio_2018_12_028
elsevier_sciencedirect_doi_10_1016_j_soilbio_2018_12_028
ProviderPackageCode CITATION
AAYXX
PublicationCentury 2000
PublicationDate April 2019
2019-04-00
20190401
PublicationDateYYYYMMDD 2019-04-01
PublicationDate_xml – month: 04
  year: 2019
  text: April 2019
PublicationDecade 2010
PublicationTitle Soil biology & biochemistry
PublicationYear 2019
Publisher Elsevier Ltd
Publisher_xml – name: Elsevier Ltd
References Wang, Zhao, Chen, Chu, Shen (bib50) 2013; 367
Mårtensson, Díez, Wartiainen, Zheng, El-Shehawy, Rasmussen (bib35) 2009; 325
Knauth, Hurek, Brar, Reinhold-Hurek (bib28) 2005; 7
Yang, Wang, Ma, Yang, Jia, Zhou, Dai (bib56) 2015; 6
Eskew, Eaglesham, App (bib13) 1981; 68
Harrell, Dupont (bib21) 2008
Hoffman, Lukoyanov, Yang, Dean, Seefeldt (bib24) 2014; 114
Lu (bib34) 2000
Poly, Monrozier, Bally (bib39) 2001; 152
Yoneyama, Lee, Yoshida (bib59) 1977; 23
Sullivan, Smith, Townsend, Nasto, Reed, Chazdon, Cleveland (bib48) 2014; 111
Liu, Delgado-Baquerizo, Trivedi, He, Wang, Singh (bib32) 2017; 107
Hayden, Drake, Imhof, Oxley, Norng, Mele (bib22) 2010; 42
Wartiainen, Eriksson, Zheng, Rasmussen (bib53) 2008; 39
Chalk, He, Peoples, Chen (bib5) 2017; 106
Jančula, Maršálek (bib27) 2011; 85
Oksanen, Blanchet, Kindt, Legendre, Minchin, O’hara, Simpson, Solymos, Stevens, Wagner (bib38) 2013
Roger, Ladha (bib45) 1992; 141
Goldberg (bib19) 1989; 20
Delgado-Baquerizo, Maestre, Reich, Jeffries, Gaitan, Encinar, Berdugo, Campbell, Singh (bib9) 2016; 7
Delgado-Baquerizo, Oliverio, Brewer, Benavent-González, Eldridge, Bardgett, Maestre, Singh, Fierer (bib10) 2018; 359
Prakamhang, Minamisawa, Teamtaisong, Boonkerd, Teaumroong (bib41) 2009; 42
Long, Jiang, Sun (bib33) 2015; 146
Wu, Ma, Lu (bib55) 2009; 57
Zhu (bib61) 2000; 1
Ladha, Reddy (bib29) 2003; 252
Prasanna (bib42) 2007; 5
Franco, Munns (bib18) 1982; 46
Canfield, Glazer, Falkowski (bib3) 2010; 330
Tirol, Roger, Watanabe (bib49) 1982; 28
Poly, Ranjard, Nazaret, Gourbière, Monrozier (bib40) 2001; 67
Shaffer, Widmer, Porteous, Seidler (bib47) 2000; 39
Bei, Liu, Tang, Cadisch, Rasche, Xie (bib1) 2013; 59
Choudhury, Kennedy (bib6) 2005; 36
Quesada, Leganés, Fernández-Valiente (bib43) 1997; 34
Yearbook (bib58) 2017
Fish, Chai, Wang, Sun, Brown, Tiedje, Cole (bib17) 2013; 4
Fierer, Jackson (bib14) 2006; 103
Cornell, Schwertmann (bib7) 2003
Wang, Butterly, Wang, Herath, Xi, Xiao (bib51) 2014; 30
Zhang, Kobert, Flouri, Stamatakis (bib60) 2013; 30
Ito, Cabrera, Watanabe (bib26) 1980; 39
Wang, Quensen, Fish, Lee, Sun, Tiedje, Cole (bib52) 2013; 4
Munns, Fox, Koch (bib36) 1977; 46
Edgar, Haas, Clemente, Quince, Knight (bib12) 2011; 27
De (bib8) 1939; 127
Edgar (bib11) 2013; 10
Schwertmann (bib46) 1993
Filip (bib16) 1973; 18
Rice, Penney, Nyborg (bib44) 1977; 57
Watanabe, Roger (bib54) 1984
Nilsson, Bhattacharya, Rai, Bergman (bib37) 2002; 156
Breiman (bib2) 2001; 45
Goldberg, Lebron, Suarez, Hinedi (bib20) 2001; 65
He, Zhang, Wilson (bib23) 2004
Yeager, Kornosky, Housman, Grote, Belnap, Kuske (bib57) 2004; 70
Liaw, Wiener (bib31) 2002; 2
Lauber, Hamady, Knight, Fierer (bib30) 2009; 75
Caporaso, Kuczynski, Stombaugh, Bittinger, Bushman, Costello, Fierer, Pena, Goodrich, Gordon (bib4) 2010; 7
Fierer, Leff, Adams, Nielsen, Bates, Lauber, Owens, Gilbert, Wall, Caporaso (bib15) 2012; 109
Husaini, Rai (bib25) 1992; 139
Wang (10.1016/j.soilbio.2018.12.028_bib51) 2014; 30
Chalk (10.1016/j.soilbio.2018.12.028_bib5) 2017; 106
Hoffman (10.1016/j.soilbio.2018.12.028_bib24) 2014; 114
Eskew (10.1016/j.soilbio.2018.12.028_bib13) 1981; 68
Poly (10.1016/j.soilbio.2018.12.028_bib40) 2001; 67
Rice (10.1016/j.soilbio.2018.12.028_bib44) 1977; 57
Long (10.1016/j.soilbio.2018.12.028_bib33) 2015; 146
Zhu (10.1016/j.soilbio.2018.12.028_bib61) 2000; 1
Sullivan (10.1016/j.soilbio.2018.12.028_bib48) 2014; 111
Harrell (10.1016/j.soilbio.2018.12.028_bib21) 2008
Nilsson (10.1016/j.soilbio.2018.12.028_bib37) 2002; 156
Prasanna (10.1016/j.soilbio.2018.12.028_bib42) 2007; 5
Liaw (10.1016/j.soilbio.2018.12.028_bib31) 2002; 2
Delgado-Baquerizo (10.1016/j.soilbio.2018.12.028_bib10) 2018; 359
Oksanen (10.1016/j.soilbio.2018.12.028_bib38) 2013
Filip (10.1016/j.soilbio.2018.12.028_bib16) 1973; 18
Caporaso (10.1016/j.soilbio.2018.12.028_bib4) 2010; 7
Prakamhang (10.1016/j.soilbio.2018.12.028_bib41) 2009; 42
Liu (10.1016/j.soilbio.2018.12.028_bib32) 2017; 107
He (10.1016/j.soilbio.2018.12.028_bib23) 2004
Fierer (10.1016/j.soilbio.2018.12.028_bib15) 2012; 109
Choudhury (10.1016/j.soilbio.2018.12.028_bib6) 2005; 36
Lauber (10.1016/j.soilbio.2018.12.028_bib30) 2009; 75
Tirol (10.1016/j.soilbio.2018.12.028_bib49) 1982; 28
Edgar (10.1016/j.soilbio.2018.12.028_bib12) 2011; 27
Goldberg (10.1016/j.soilbio.2018.12.028_bib19) 1989; 20
Cornell (10.1016/j.soilbio.2018.12.028_bib7) 2003
Hayden (10.1016/j.soilbio.2018.12.028_bib22) 2010; 42
Ladha (10.1016/j.soilbio.2018.12.028_bib29) 2003; 252
Roger (10.1016/j.soilbio.2018.12.028_bib45) 1992; 141
Yeager (10.1016/j.soilbio.2018.12.028_bib57) 2004; 70
Bei (10.1016/j.soilbio.2018.12.028_bib1) 2013; 59
Fierer (10.1016/j.soilbio.2018.12.028_bib14) 2006; 103
Ito (10.1016/j.soilbio.2018.12.028_bib26) 1980; 39
Munns (10.1016/j.soilbio.2018.12.028_bib36) 1977; 46
Yang (10.1016/j.soilbio.2018.12.028_bib56) 2015; 6
Delgado-Baquerizo (10.1016/j.soilbio.2018.12.028_bib9) 2016; 7
Wu (10.1016/j.soilbio.2018.12.028_bib55) 2009; 57
Zhang (10.1016/j.soilbio.2018.12.028_bib60) 2013; 30
De (10.1016/j.soilbio.2018.12.028_bib8) 1939; 127
Edgar (10.1016/j.soilbio.2018.12.028_bib11) 2013; 10
Watanabe (10.1016/j.soilbio.2018.12.028_bib54) 1984
Knauth (10.1016/j.soilbio.2018.12.028_bib28) 2005; 7
Wang (10.1016/j.soilbio.2018.12.028_bib50) 2013; 367
Mårtensson (10.1016/j.soilbio.2018.12.028_bib35) 2009; 325
Lu (10.1016/j.soilbio.2018.12.028_bib34) 2000
Jančula (10.1016/j.soilbio.2018.12.028_bib27) 2011; 85
Husaini (10.1016/j.soilbio.2018.12.028_bib25) 1992; 139
Goldberg (10.1016/j.soilbio.2018.12.028_bib20) 2001; 65
Wartiainen (10.1016/j.soilbio.2018.12.028_bib53) 2008; 39
Poly (10.1016/j.soilbio.2018.12.028_bib39) 2001; 152
Schwertmann (10.1016/j.soilbio.2018.12.028_bib46) 1993
Yoneyama (10.1016/j.soilbio.2018.12.028_bib59) 1977; 23
Franco (10.1016/j.soilbio.2018.12.028_bib18) 1982; 46
Shaffer (10.1016/j.soilbio.2018.12.028_bib47) 2000; 39
Quesada (10.1016/j.soilbio.2018.12.028_bib43) 1997; 34
Yearbook (10.1016/j.soilbio.2018.12.028_bib58) 2017
Breiman (10.1016/j.soilbio.2018.12.028_bib2) 2001; 45
Canfield (10.1016/j.soilbio.2018.12.028_bib3) 2010; 330
Fish (10.1016/j.soilbio.2018.12.028_bib17) 2013; 4
Wang (10.1016/j.soilbio.2018.12.028_bib52) 2013; 4
References_xml – volume: 4
  start-page: 291
  year: 2013
  ident: bib17
  article-title: FunGene: the functional gene pipeline and repository
  publication-title: Frontiers in Microbiology
– volume: 34
  start-page: 39
  year: 1997
  end-page: 48
  ident: bib43
  article-title: Environmental factors controlling N
  publication-title: Microbial Ecology
– volume: 57
  start-page: 197
  year: 1977
  end-page: 203
  ident: bib44
  article-title: Effects of soil acidity on rhizobia numbers, nodulation and nitrogen fixation by alfalfa and red clover
  publication-title: Canadian Journal of Soil Science
– volume: 36
  start-page: 1625
  year: 2005
  end-page: 1639
  ident: bib6
  article-title: Nitrogen fertilizer losses from rice soils and control of environmental pollution problems
  publication-title: Communications in Soil Science and Plant Analysis
– volume: 28
  start-page: 559
  year: 1982
  end-page: 569
  ident: bib49
  article-title: Fate of nitrogen from a blue-green alga in a flooded rice soil
  publication-title: Soil Science & Plant Nutrition
– volume: 39
  start-page: 554
  year: 1980
  end-page: 558
  ident: bib26
  article-title: Fixation of dinitrogen-15 associated with rice plants
  publication-title: Applied and Environmental Microbiology
– volume: 139
  start-page: 703
  year: 1992
  end-page: 707
  ident: bib25
  article-title: pH dependent aluminium toxicity to Nostoc linckia: studies on phosphate uptake, alkaline and acid phosphatase activity, ATP content, photosynthesis and carbon fixation
  publication-title: Journal of Plant Physiology
– volume: 152
  start-page: 95
  year: 2001
  end-page: 103
  ident: bib39
  article-title: Improvement in the RFLP procedure for studying the diversity of nifH genes in communities of nitrogen fixers in soil
  publication-title: Research in Microbiology
– start-page: 1
  year: 2003
  end-page: 7
  ident: bib7
  article-title: The Iron Oxides: Structure, Properties, Reactions, Occurences and Uses
– volume: 70
  start-page: 973
  year: 2004
  end-page: 983
  ident: bib57
  article-title: Diazotrophic community structure and function in two successional stages of biological soil crusts from the Colorado Plateau and Chihuahuan Desert
  publication-title: Applied and Environmental Microbiology
– volume: 20
  start-page: 1181
  year: 1989
  end-page: 1207
  ident: bib19
  article-title: Interaction of aluminum and iron oxides and clay minerals and their effect on soil physical properties: a review
  publication-title: Communications in Soil Science and Plant Analysis
– volume: 156
  start-page: 517
  year: 2002
  end-page: 525
  ident: bib37
  article-title: Colonization of roots of rice (Oryza sativa) by symbiotic Nostoc strains
  publication-title: New Phytologist
– volume: 127
  start-page: 121
  year: 1939
  end-page: 139
  ident: bib8
  article-title: The role of blue-green algae in nitrogen fixation in rice-fields
  publication-title: Proceedings of the Royal Society of London B
– volume: 67
  start-page: 2255
  year: 2001
  end-page: 2262
  ident: bib40
  article-title: Comparison of nifH gene pools in soils and soil microenvironments with contrasting properties
  publication-title: Applied and Environmental Microbiology
– start-page: 206
  year: 2017
  end-page: 207
  ident: bib58
  article-title: National bureau of statistics of China
  publication-title: China Statistical Yearbook
– volume: 7
  start-page: 10541
  year: 2016
  ident: bib9
  article-title: Microbial diversity drives multifunctionality in terrestrial ecosystems
  publication-title: Nature Communications
– year: 2008
  ident: bib21
  article-title: Hmisc: Harrell Miscellaneous. R Package Version 3
– volume: 146
  start-page: 270
  year: 2015
  end-page: 278
  ident: bib33
  article-title: Seasonal and inter-annual variation of leaching of dissolved organic carbon and nitrogen under long-term manure application in an acidic clay soil in subtropical China
  publication-title: Soil and Tillage Research
– volume: 39
  start-page: 12
  year: 2000
  end-page: 21
  ident: bib47
  article-title: Temporal and spatial distribution of the nifH gene of N
  publication-title: Microbial Ecology
– volume: 85
  start-page: 1415
  year: 2011
  end-page: 1422
  ident: bib27
  article-title: Critical review of actually available chemical compounds for prevention and management of cyanobacterial blooms
  publication-title: Chemosphere
– start-page: 127
  year: 2000
  end-page: 332
  ident: bib34
  article-title: Methods of Soil and Agro-Chemical Analysis
– volume: 42
  start-page: 1774
  year: 2010
  end-page: 1783
  ident: bib22
  article-title: The abundance of nitrogen cycle genes amoA and nifH depends on land-uses and soil types in South-Eastern Australia
  publication-title: Soil Biology and Biochemistry
– volume: 7
  start-page: 1725
  year: 2005
  end-page: 1733
  ident: bib28
  article-title: Influence of different Oryza cultivars on expression of nifH gene pools in roots of rice
  publication-title: Environmental Microbiology
– volume: 367
  start-page: 275
  year: 2013
  end-page: 284
  ident: bib50
  article-title: Aluminum tolerance of wheat does not induce changes in dominant bacterial community composition or abundance in an acidic soil
  publication-title: Plant and Soil
– volume: 65
  start-page: 78
  year: 2001
  end-page: 86
  ident: bib20
  article-title: Surface characterization of amorphous aluminum oxides
  publication-title: Soil Science Society of America Journal
– volume: 30
  start-page: 119
  year: 2014
  end-page: 128
  ident: bib51
  article-title: Effect of crop residue biochar on soil acidity amelioration in strongly acidic tea garden soils
  publication-title: Soil Use & Management
– volume: 359
  start-page: 320
  year: 2018
  end-page: 325
  ident: bib10
  article-title: A global atlas of the dominant bacteria found in soil
  publication-title: Science
– volume: 59
  start-page: 25
  year: 2013
  end-page: 31
  ident: bib1
  article-title: Heterotrophic and phototrophic
  publication-title: Soil Biology and Biochemistry
– volume: 45
  start-page: 5
  year: 2001
  end-page: 32
  ident: bib2
  article-title: Random forests
  publication-title: Machine Learning
– volume: 30
  start-page: 614
  year: 2013
  end-page: 620
  ident: bib60
  article-title: PEAR: a fast and accurate Illumina Paired-End reAd mergeR
  publication-title: Bioinformatics
– volume: 2
  start-page: 18
  year: 2002
  end-page: 22
  ident: bib31
  article-title: Classification and regression by randomForest
  publication-title: R News
– volume: 109
  start-page: 21390
  year: 2012
  end-page: 21395
  ident: bib15
  article-title: Cross-biome metagenomic analyses of soil microbial communities and their functional attributes
  publication-title: Proceedings of the National Academy of Sciences
– volume: 106
  start-page: 36
  year: 2017
  end-page: 50
  ident: bib5
  article-title: N
  publication-title: Soil Biology and Biochemistry
– volume: 75
  start-page: 5111
  year: 2009
  end-page: 5120
  ident: bib30
  article-title: Pyrosequencing-based assessment of soil pH as a predictor of soil Bacterial community structure at the continental scale
  publication-title: Applied and Environmental Microbiology
– volume: 111
  start-page: 8101
  year: 2014
  end-page: 8106
  ident: bib48
  article-title: Spatially robust estimates of biological nitrogen (N) fixation imply substantial human alteration of the tropical N cycle
  publication-title: Proceedings of the National Academy of Sciences
– volume: 107
  start-page: 208
  year: 2017
  end-page: 217
  ident: bib32
  article-title: Identity of biocrust species and microbial communities drive the response of soil multifunctionality to simulated global change
  publication-title: Soil Biology and Biochemistry
– volume: 141
  start-page: 41
  year: 1992
  end-page: 55
  ident: bib45
  article-title: Biological N
  publication-title: Plant and Soil
– volume: 6
  start-page: 982
  year: 2015
  ident: bib56
  article-title: Fungal endophyte Phomopsis liquidambari affects nitrogen transformation processes and related microorganisms in the rice rhizosphere
  publication-title: Frontiers in Microbiology
– volume: 27
  start-page: 2194
  year: 2011
  end-page: 2200
  ident: bib12
  article-title: UCHIME improves sensitivity and speed of chimera detection
  publication-title: Bioinformatics
– volume: 4
  year: 2013
  ident: bib52
  article-title: Ecological patterns of nifH genes in four terrestrial climatic zones explored with targeted metagenomics using FrameBot, a new informatics tool
  publication-title: mBio
– start-page: 51
  year: 1993
  end-page: 69
  ident: bib46
  article-title: Relations between iron oxides, soil color, and soil formation
  publication-title: Soil Color
– volume: 5
  start-page: 103
  year: 2007
  end-page: 113
  ident: bib42
  article-title: Soil pH and its role in cyanobacterial abundance and diversity in rice field soils
  publication-title: Applied Ecology and Environmental Research
– volume: 42
  start-page: 141
  year: 2009
  end-page: 149
  ident: bib41
  article-title: The communities of endophytic diazotrophic bacteria in cultivated rice (Oryza sativa L.)
  publication-title: Applied Soil Ecology
– volume: 10
  start-page: 996
  year: 2013
  ident: bib11
  article-title: UPARSE: highly accurate OTU sequences from microbial amplicon reads
  publication-title: Nature Methods
– year: 2013
  ident: bib38
  article-title: Package ‘vegan’. Community Ecology Package, version 2
– volume: 18
  start-page: 56
  year: 1973
  end-page: 74
  ident: bib16
  article-title: Clay minerals as a factor influencing the biochemical activity of soil microorganisms
  publication-title: Folia Microbiologica
– volume: 330
  start-page: 192
  year: 2010
  end-page: 196
  ident: bib3
  article-title: The evolution and future of Earth's nitrogen cycle
  publication-title: Science
– volume: 46
  start-page: 591
  year: 1977
  end-page: 601
  ident: bib36
  article-title: Influence of lime on nitrogen fixation by tropical and temperate legumes
  publication-title: Plant and Soil
– volume: 103
  start-page: 626
  year: 2006
  end-page: 631
  ident: bib14
  article-title: The diversity and biogeography of soil bacterial communities
  publication-title: Proceedings of the National Academy of Sciences
– volume: 114
  start-page: 4041
  year: 2014
  end-page: 4062
  ident: bib24
  article-title: Mechanism of nitrogen fixation by nitrogenase: the next stage
  publication-title: Chemical Reviews
– volume: 57
  start-page: 58
  year: 2009
  end-page: 68
  ident: bib55
  article-title: Prevalence of betaproteobacterial sequences in nifH gene pools associated with roots of modern rice cultivars
  publication-title: Microbial Ecology
– start-page: 29
  year: 2004
  end-page: 33
  ident: bib23
  article-title: Distribution and classification of red soils in China
  publication-title: The Red Soils of China
– volume: 23
  start-page: 287
  year: 1977
  end-page: 295
  ident: bib59
  article-title: Decomposition of rice residues in tropical soils: IV. The effect of rice straw on nitrogen fixation by heterotrophic bacteria in some Philippine soils
  publication-title: Soil Science & Plant Nutrition
– volume: 7
  start-page: 335
  year: 2010
  ident: bib4
  article-title: QIIME allows analysis of high-throughput community sequencing data
  publication-title: Nature Methods
– volume: 46
  start-page: 296
  year: 1982
  end-page: 301
  ident: bib18
  article-title: Acidity and aluminum restraints on nodulation, nitrogen fixation, and growth of Phaseolus vulgaris in solution culture 1
  publication-title: Soil Science Society of America Journal
– start-page: 237
  year: 1984
  end-page: 276
  ident: bib54
  article-title: Nitrogen fixation in wetland rice field
  publication-title: Current Development in Biological Nitrogen Fixation
– volume: 68
  start-page: 48
  year: 1981
  end-page: 52
  ident: bib13
  article-title: Heterotrophic
  publication-title: Plant Physiology
– volume: 252
  start-page: 151
  year: 2003
  end-page: 167
  ident: bib29
  article-title: Nitrogen fixation in rice systems: state of knowledge and future prospects
  publication-title: Plant and Soil
– volume: 1
  start-page: 1
  year: 2000
  end-page: 6
  ident: bib61
  article-title: Loss of Fertilizer N from plants-soil system and the strategies and techniques for its reduction
  publication-title: Soil and Environmental Sciences
– volume: 325
  start-page: 207
  year: 2009
  ident: bib35
  article-title: Diazotrophic diversity, nifH gene expression and nitrogenase activity in a rice paddy field in Fujian, China
  publication-title: Plant and Soil
– volume: 39
  start-page: 65
  year: 2008
  end-page: 75
  ident: bib53
  article-title: Variation in the active diazotrophic community in rice paddy—nifH PCR-DGGE analysis of rhizosphere and bulk soil
  publication-title: Applied Soil Ecology
– volume: 5
  start-page: 103
  year: 2007
  ident: 10.1016/j.soilbio.2018.12.028_bib42
  article-title: Soil pH and its role in cyanobacterial abundance and diversity in rice field soils
  publication-title: Applied Ecology and Environmental Research
  doi: 10.15666/aeer/0502_103113
– volume: 103
  start-page: 626
  year: 2006
  ident: 10.1016/j.soilbio.2018.12.028_bib14
  article-title: The diversity and biogeography of soil bacterial communities
  publication-title: Proceedings of the National Academy of Sciences
  doi: 10.1073/pnas.0507535103
– volume: 42
  start-page: 1774
  year: 2010
  ident: 10.1016/j.soilbio.2018.12.028_bib22
  article-title: The abundance of nitrogen cycle genes amoA and nifH depends on land-uses and soil types in South-Eastern Australia
  publication-title: Soil Biology and Biochemistry
  doi: 10.1016/j.soilbio.2010.06.015
– volume: 127
  start-page: 121
  year: 1939
  ident: 10.1016/j.soilbio.2018.12.028_bib8
  article-title: The role of blue-green algae in nitrogen fixation in rice-fields
  publication-title: Proceedings of the Royal Society of London B
  doi: 10.1098/rspb.1939.0014
– volume: 30
  start-page: 119
  year: 2014
  ident: 10.1016/j.soilbio.2018.12.028_bib51
  article-title: Effect of crop residue biochar on soil acidity amelioration in strongly acidic tea garden soils
  publication-title: Soil Use & Management
  doi: 10.1111/sum.12096
– start-page: 206
  year: 2017
  ident: 10.1016/j.soilbio.2018.12.028_bib58
  article-title: National bureau of statistics of China
  publication-title: China Statistical Yearbook
– volume: 109
  start-page: 21390
  year: 2012
  ident: 10.1016/j.soilbio.2018.12.028_bib15
  article-title: Cross-biome metagenomic analyses of soil microbial communities and their functional attributes
  publication-title: Proceedings of the National Academy of Sciences
  doi: 10.1073/pnas.1215210110
– volume: 57
  start-page: 197
  year: 1977
  ident: 10.1016/j.soilbio.2018.12.028_bib44
  article-title: Effects of soil acidity on rhizobia numbers, nodulation and nitrogen fixation by alfalfa and red clover
  publication-title: Canadian Journal of Soil Science
  doi: 10.4141/cjss77-024
– volume: 139
  start-page: 703
  year: 1992
  ident: 10.1016/j.soilbio.2018.12.028_bib25
  article-title: pH dependent aluminium toxicity to Nostoc linckia: studies on phosphate uptake, alkaline and acid phosphatase activity, ATP content, photosynthesis and carbon fixation
  publication-title: Journal of Plant Physiology
  doi: 10.1016/S0176-1617(11)81714-1
– volume: 367
  start-page: 275
  year: 2013
  ident: 10.1016/j.soilbio.2018.12.028_bib50
  article-title: Aluminum tolerance of wheat does not induce changes in dominant bacterial community composition or abundance in an acidic soil
  publication-title: Plant and Soil
  doi: 10.1007/s11104-012-1473-3
– volume: 4
  year: 2013
  ident: 10.1016/j.soilbio.2018.12.028_bib52
  article-title: Ecological patterns of nifH genes in four terrestrial climatic zones explored with targeted metagenomics using FrameBot, a new informatics tool
  publication-title: mBio
  doi: 10.1128/mBio.00592-13
– volume: 359
  start-page: 320
  year: 2018
  ident: 10.1016/j.soilbio.2018.12.028_bib10
  article-title: A global atlas of the dominant bacteria found in soil
  publication-title: Science
  doi: 10.1126/science.aap9516
– volume: 46
  start-page: 591
  year: 1977
  ident: 10.1016/j.soilbio.2018.12.028_bib36
  article-title: Influence of lime on nitrogen fixation by tropical and temperate legumes
  publication-title: Plant and Soil
  doi: 10.1007/BF00015918
– volume: 252
  start-page: 151
  year: 2003
  ident: 10.1016/j.soilbio.2018.12.028_bib29
  article-title: Nitrogen fixation in rice systems: state of knowledge and future prospects
  publication-title: Plant and Soil
  doi: 10.1023/A:1024175307238
– volume: 111
  start-page: 8101
  year: 2014
  ident: 10.1016/j.soilbio.2018.12.028_bib48
  article-title: Spatially robust estimates of biological nitrogen (N) fixation imply substantial human alteration of the tropical N cycle
  publication-title: Proceedings of the National Academy of Sciences
  doi: 10.1073/pnas.1320646111
– volume: 4
  start-page: 291
  year: 2013
  ident: 10.1016/j.soilbio.2018.12.028_bib17
  article-title: FunGene: the functional gene pipeline and repository
  publication-title: Frontiers in Microbiology
  doi: 10.3389/fmicb.2013.00291
– volume: 10
  start-page: 996
  year: 2013
  ident: 10.1016/j.soilbio.2018.12.028_bib11
  article-title: UPARSE: highly accurate OTU sequences from microbial amplicon reads
  publication-title: Nature Methods
  doi: 10.1038/nmeth.2604
– volume: 114
  start-page: 4041
  year: 2014
  ident: 10.1016/j.soilbio.2018.12.028_bib24
  article-title: Mechanism of nitrogen fixation by nitrogenase: the next stage
  publication-title: Chemical Reviews
  doi: 10.1021/cr400641x
– volume: 325
  start-page: 207
  year: 2009
  ident: 10.1016/j.soilbio.2018.12.028_bib35
  article-title: Diazotrophic diversity, nifH gene expression and nitrogenase activity in a rice paddy field in Fujian, China
  publication-title: Plant and Soil
  doi: 10.1007/s11104-009-9970-8
– volume: 156
  start-page: 517
  year: 2002
  ident: 10.1016/j.soilbio.2018.12.028_bib37
  article-title: Colonization of roots of rice (Oryza sativa) by symbiotic Nostoc strains
  publication-title: New Phytologist
  doi: 10.1046/j.1469-8137.2002.00534.x
– volume: 42
  start-page: 141
  year: 2009
  ident: 10.1016/j.soilbio.2018.12.028_bib41
  article-title: The communities of endophytic diazotrophic bacteria in cultivated rice (Oryza sativa L.)
  publication-title: Applied Soil Ecology
  doi: 10.1016/j.apsoil.2009.02.008
– volume: 18
  start-page: 56
  year: 1973
  ident: 10.1016/j.soilbio.2018.12.028_bib16
  article-title: Clay minerals as a factor influencing the biochemical activity of soil microorganisms
  publication-title: Folia Microbiologica
  doi: 10.1007/BF02884250
– volume: 34
  start-page: 39
  year: 1997
  ident: 10.1016/j.soilbio.2018.12.028_bib43
  article-title: Environmental factors controlling N2 fixation in Mediterranean rice fields
  publication-title: Microbial Ecology
  doi: 10.1007/s002489900032
– volume: 2
  start-page: 18
  year: 2002
  ident: 10.1016/j.soilbio.2018.12.028_bib31
  article-title: Classification and regression by randomForest
  publication-title: R News
– volume: 39
  start-page: 65
  year: 2008
  ident: 10.1016/j.soilbio.2018.12.028_bib53
  article-title: Variation in the active diazotrophic community in rice paddy—nifH PCR-DGGE analysis of rhizosphere and bulk soil
  publication-title: Applied Soil Ecology
  doi: 10.1016/j.apsoil.2007.11.008
– volume: 57
  start-page: 58
  year: 2009
  ident: 10.1016/j.soilbio.2018.12.028_bib55
  article-title: Prevalence of betaproteobacterial sequences in nifH gene pools associated with roots of modern rice cultivars
  publication-title: Microbial Ecology
  doi: 10.1007/s00248-008-9403-x
– start-page: 237
  year: 1984
  ident: 10.1016/j.soilbio.2018.12.028_bib54
  article-title: Nitrogen fixation in wetland rice field
– volume: 20
  start-page: 1181
  year: 1989
  ident: 10.1016/j.soilbio.2018.12.028_bib19
  article-title: Interaction of aluminum and iron oxides and clay minerals and their effect on soil physical properties: a review
  publication-title: Communications in Soil Science and Plant Analysis
  doi: 10.1080/00103629009368144
– start-page: 1
  year: 2003
  ident: 10.1016/j.soilbio.2018.12.028_bib7
– volume: 59
  start-page: 25
  year: 2013
  ident: 10.1016/j.soilbio.2018.12.028_bib1
  article-title: Heterotrophic and phototrophic 15N2 fixation and distribution of fixed 15N in a flooded rice–soil system
  publication-title: Soil Biology and Biochemistry
  doi: 10.1016/j.soilbio.2013.01.008
– start-page: 51
  year: 1993
  ident: 10.1016/j.soilbio.2018.12.028_bib46
  article-title: Relations between iron oxides, soil color, and soil formation
– volume: 107
  start-page: 208
  year: 2017
  ident: 10.1016/j.soilbio.2018.12.028_bib32
  article-title: Identity of biocrust species and microbial communities drive the response of soil multifunctionality to simulated global change
  publication-title: Soil Biology and Biochemistry
  doi: 10.1016/j.soilbio.2016.12.003
– volume: 23
  start-page: 287
  year: 1977
  ident: 10.1016/j.soilbio.2018.12.028_bib59
  article-title: Decomposition of rice residues in tropical soils: IV. The effect of rice straw on nitrogen fixation by heterotrophic bacteria in some Philippine soils
  publication-title: Soil Science & Plant Nutrition
  doi: 10.1080/00380768.1977.10433048
– volume: 1
  start-page: 1
  year: 2000
  ident: 10.1016/j.soilbio.2018.12.028_bib61
  article-title: Loss of Fertilizer N from plants-soil system and the strategies and techniques for its reduction
  publication-title: Soil and Environmental Sciences
– volume: 7
  start-page: 335
  year: 2010
  ident: 10.1016/j.soilbio.2018.12.028_bib4
  article-title: QIIME allows analysis of high-throughput community sequencing data
  publication-title: Nature Methods
  doi: 10.1038/nmeth.f.303
– volume: 65
  start-page: 78
  year: 2001
  ident: 10.1016/j.soilbio.2018.12.028_bib20
  article-title: Surface characterization of amorphous aluminum oxides
  publication-title: Soil Science Society of America Journal
  doi: 10.2136/sssaj2001.65178x
– volume: 67
  start-page: 2255
  year: 2001
  ident: 10.1016/j.soilbio.2018.12.028_bib40
  article-title: Comparison of nifH gene pools in soils and soil microenvironments with contrasting properties
  publication-title: Applied and Environmental Microbiology
  doi: 10.1128/AEM.67.5.2255-2262.2001
– volume: 36
  start-page: 1625
  year: 2005
  ident: 10.1016/j.soilbio.2018.12.028_bib6
  article-title: Nitrogen fertilizer losses from rice soils and control of environmental pollution problems
  publication-title: Communications in Soil Science and Plant Analysis
  doi: 10.1081/CSS-200059104
– volume: 6
  start-page: 982
  year: 2015
  ident: 10.1016/j.soilbio.2018.12.028_bib56
  article-title: Fungal endophyte Phomopsis liquidambari affects nitrogen transformation processes and related microorganisms in the rice rhizosphere
  publication-title: Frontiers in Microbiology
  doi: 10.3389/fmicb.2015.00982
– volume: 46
  start-page: 296
  year: 1982
  ident: 10.1016/j.soilbio.2018.12.028_bib18
  article-title: Acidity and aluminum restraints on nodulation, nitrogen fixation, and growth of Phaseolus vulgaris in solution culture 1
  publication-title: Soil Science Society of America Journal
  doi: 10.2136/sssaj1982.03615995004600020016x
– volume: 7
  start-page: 1725
  year: 2005
  ident: 10.1016/j.soilbio.2018.12.028_bib28
  article-title: Influence of different Oryza cultivars on expression of nifH gene pools in roots of rice
  publication-title: Environmental Microbiology
  doi: 10.1111/j.1462-2920.2005.00841.x
– volume: 39
  start-page: 554
  year: 1980
  ident: 10.1016/j.soilbio.2018.12.028_bib26
  article-title: Fixation of dinitrogen-15 associated with rice plants
  publication-title: Applied and Environmental Microbiology
  doi: 10.1128/AEM.39.3.554-558.1980
– start-page: 29
  year: 2004
  ident: 10.1016/j.soilbio.2018.12.028_bib23
  article-title: Distribution and classification of red soils in China
– volume: 146
  start-page: 270
  year: 2015
  ident: 10.1016/j.soilbio.2018.12.028_bib33
  article-title: Seasonal and inter-annual variation of leaching of dissolved organic carbon and nitrogen under long-term manure application in an acidic clay soil in subtropical China
  publication-title: Soil and Tillage Research
  doi: 10.1016/j.still.2014.09.020
– volume: 39
  start-page: 12
  year: 2000
  ident: 10.1016/j.soilbio.2018.12.028_bib47
  article-title: Temporal and spatial distribution of the nifH gene of N2 fixing bacteria in forests and clearcuts in western Oregon
  publication-title: Microbial Ecology
  doi: 10.1007/s002489900183
– volume: 28
  start-page: 559
  year: 1982
  ident: 10.1016/j.soilbio.2018.12.028_bib49
  article-title: Fate of nitrogen from a blue-green alga in a flooded rice soil
  publication-title: Soil Science & Plant Nutrition
  doi: 10.1080/00380768.1982.10432396
– volume: 68
  start-page: 48
  year: 1981
  ident: 10.1016/j.soilbio.2018.12.028_bib13
  article-title: Heterotrophic 15N2 fixation and distribution of newly fixed nitrogen in a rice-flooded soil system
  publication-title: Plant Physiology
  doi: 10.1104/pp.68.1.48
– volume: 330
  start-page: 192
  year: 2010
  ident: 10.1016/j.soilbio.2018.12.028_bib3
  article-title: The evolution and future of Earth's nitrogen cycle
  publication-title: Science
  doi: 10.1126/science.1186120
– volume: 141
  start-page: 41
  year: 1992
  ident: 10.1016/j.soilbio.2018.12.028_bib45
  article-title: Biological N2 fixation in wetland rice fields: estimation and contribution to nitrogen balance, Biological Nitrogen Fixation for Sustainable Agriculture
  publication-title: Plant and Soil
  doi: 10.1007/BF00011309
– volume: 27
  start-page: 2194
  year: 2011
  ident: 10.1016/j.soilbio.2018.12.028_bib12
  article-title: UCHIME improves sensitivity and speed of chimera detection
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/btr381
– volume: 30
  start-page: 614
  year: 2013
  ident: 10.1016/j.soilbio.2018.12.028_bib60
  article-title: PEAR: a fast and accurate Illumina Paired-End reAd mergeR
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/btt593
– volume: 152
  start-page: 95
  year: 2001
  ident: 10.1016/j.soilbio.2018.12.028_bib39
  article-title: Improvement in the RFLP procedure for studying the diversity of nifH genes in communities of nitrogen fixers in soil
  publication-title: Research in Microbiology
  doi: 10.1016/S0923-2508(00)01172-4
– volume: 85
  start-page: 1415
  year: 2011
  ident: 10.1016/j.soilbio.2018.12.028_bib27
  article-title: Critical review of actually available chemical compounds for prevention and management of cyanobacterial blooms
  publication-title: Chemosphere
  doi: 10.1016/j.chemosphere.2011.08.036
– volume: 106
  start-page: 36
  year: 2017
  ident: 10.1016/j.soilbio.2018.12.028_bib5
  article-title: 15N2 as a tracer of biological N2 fixation: a 75-year retrospective
  publication-title: Soil Biology and Biochemistry
  doi: 10.1016/j.soilbio.2016.12.010
– volume: 7
  start-page: 10541
  year: 2016
  ident: 10.1016/j.soilbio.2018.12.028_bib9
  article-title: Microbial diversity drives multifunctionality in terrestrial ecosystems
  publication-title: Nature Communications
  doi: 10.1038/ncomms10541
– year: 2013
  ident: 10.1016/j.soilbio.2018.12.028_bib38
– volume: 45
  start-page: 5
  year: 2001
  ident: 10.1016/j.soilbio.2018.12.028_bib2
  article-title: Random forests
  publication-title: Machine Learning
  doi: 10.1023/A:1010933404324
– volume: 70
  start-page: 973
  year: 2004
  ident: 10.1016/j.soilbio.2018.12.028_bib57
  article-title: Diazotrophic community structure and function in two successional stages of biological soil crusts from the Colorado Plateau and Chihuahuan Desert
  publication-title: Applied and Environmental Microbiology
  doi: 10.1128/AEM.70.2.973-983.2004
– start-page: 127
  year: 2000
  ident: 10.1016/j.soilbio.2018.12.028_bib34
– year: 2008
  ident: 10.1016/j.soilbio.2018.12.028_bib21
– volume: 75
  start-page: 5111
  year: 2009
  ident: 10.1016/j.soilbio.2018.12.028_bib30
  article-title: Pyrosequencing-based assessment of soil pH as a predictor of soil Bacterial community structure at the continental scale
  publication-title: Applied and Environmental Microbiology
  doi: 10.1128/AEM.00335-09
SSID ssj0002513
Score 2.5140882
Snippet Biological nitrogen fixation (BNF) contributed greatly in maintaining the fertility of paddy soils without the application of chemical fertilizers for...
SourceID proquest
crossref
elsevier
SourceType Aggregation Database
Enrichment Source
Index Database
Publisher
StartPage 81
SubjectTerms 15N2-labeling
algorithms
aluminum oxide
Aluminum oxides
Biological nitrogen fixation
China
Diazotrophs
genes
high-throughput nucleotide sequencing
mineral fertilizers
nitrogen fixation
nitrogen-fixing bacteria
Nostocales
Oxisols
Paddy soil
paddy soils
soil properties
stable isotopes
Ultisols
Title Soil aluminum oxides determine biological nitrogen fixation and diazotrophic communities across major types of paddy soils in China
URI https://dx.doi.org/10.1016/j.soilbio.2018.12.028
https://www.proquest.com/docview/2189544405
Volume 131
hasFullText 1
inHoldings 1
isFullTextHit
isPrint
link http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwnV1Lb9QwELaqcgAOCAqI8qgGiWu6eYwb73G1olpA9AKVerP8hKzaZLUPqXDgwh9nJnGoQEiVOCaWE8ff-JuJPQ8h3qAp1LQ0PotlqDP0xmTWnGDmVPTR1wFj71X58exkcY7vL-TFnpiPsTDsVpm4f-D0nq3TnUmazcmqaTjGl5OlF0SuFZ9KMg8j1izlxz9u3DxIf6fEu4qDdeqbKJ7JkvPlXtqGYwAL1e8KclH2f-unv5i6Vz-nD8WDZDfCbBjaI7EX2gNxf_ZlnXJnhANxdz4Wb3ssfn6id4Ih5mna3RV0140PG_DJ9yXAkHuJAQJa0-uOxAhic93DBKb1QGLzvaOG1dfGgRuiSDj3Kph-3HBllt0aeAN3A12EFRHYN-AP3UDTQl-V-4k4P337eb7IUr2FzFVYbjMprZOFpUVZmLoIRuY-N1NlZZVbVBzFa4zJY7C2cmX0noyzykVq9aG20lbVU7Hfdm14JkDlrlBO1oilRYzRWhkrRb-XvsRIRsahwHGWtUvJyLkmxqUevc6WOoGjGRxdlJrAORTHv7uthmwct3VQI4T6D7HSpDFu6_p6hFwTeHyOYtrQ7TaarKKpRCRT9_n_P_6FuEdX08EJ6KXY36534RXZN1t71Avwkbgze_dhcfYLQAX_QA
linkProvider Elsevier
linkToHtml http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwnV1Lb9QwELaqcigcEC0gWl6DxDXdOLEb77FaUW2h7YVW6s3yE7Jqk9U-pMKhl_5xZhKHCoRUiWssJ46_8eeRPfMNYx-F4WpcGJ_FIlSZ8MZk1hyIzKnoo6-CiF1U5enZwfRCfL6UlxtsMuTCUFhl4v6e0zu2Tk9GaTZH87qmHF8SS-dIriXdSiIPPxK4fKmMwf7tfZwHbuBJeVdRtk51n8YzmpFg7pWtKQmQq-5YkKqy_3uD-ouqu_3n6Bl7mhxHOOzHts02QrPDnhx-WyTxjLDDtiZD9bbn7O4rfhMMUk_drK-hval9WIJPwS8BevElQghwUS9atCOI9U2HE5jGA9rNzxYb5t9rB65PIyHxVTDduOHazNoF0AnuEtoIc2SwH0A_uoS6ga4s9wt2cfTpfDLNUsGFzJWiWGVSWie5xVXJTcWDkbnPzVhZWeZWKErjNcbkMVhbuiJ6j95Z6SK2-lBZacvyJdts2ia8YqByx5WTlRCFFSJGa2VEbHjuCxHRy9hlYphl7ZIaORXFuNJD2NlMJ3A0gaN5oRGcXbb_u9u8l-N4qIMaINR_2JXGLeOhrh8GyDWCRxcppgnteqnRLRpLIdDX3fv_179nW9Pz0xN9cnz25TV7jC3jPiLoDdtcLdbhLTo7K_uuM-ZfBP4A3Q
openUrl ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=Soil+aluminum+oxides+determine+biological+nitrogen+fixation+and+diazotrophic+communities+across+major+types+of+paddy+soils+in+China&rft.jtitle=Soil+biology+%26+biochemistry&rft.au=Wang%2C+Xiaojie&rft.au=Liu%2C+Benjuan&rft.au=Ma%2C+Jing&rft.au=Zhang%2C+Yanhui&rft.date=2019-04-01&rft.issn=0038-0717&rft.volume=131+p.81-89&rft.spage=81&rft.epage=89&rft_id=info:doi/10.1016%2Fj.soilbio.2018.12.028&rft.externalDBID=NO_FULL_TEXT
thumbnail_l http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/lc.gif&issn=0038-0717&client=summon
thumbnail_m http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/mc.gif&issn=0038-0717&client=summon
thumbnail_s http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/sc.gif&issn=0038-0717&client=summon