How Suitable Are Registry Data for Recurrence Risk Calculations? Validation of Diagnoses on 1,593 Families With Congenital Heart Disease

Congenital heart disease (CHD) occurs in approximately 1% of all live births, and 3% to 8% of these have until now been considered familial cases, defined as the occurrence of two or more affected individuals in a family. The validity of CHD diagnoses in Danish administrative registry data has only...

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Published inWorld journal for pediatric & congenital heart surgery Vol. 7; no. 2; p. 169
Main Authors Ellesøe, Sabrina Gade, Jensen, Anders Boeck, Ängquist, Lars Henrik, Hjortdal, Vibeke Elisabeth, Larsen, Lars Allan, Brunak, Søren
Format Journal Article
LanguageEnglish
Published United States 01.03.2016
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Abstract Congenital heart disease (CHD) occurs in approximately 1% of all live births, and 3% to 8% of these have until now been considered familial cases, defined as the occurrence of two or more affected individuals in a family. The validity of CHD diagnoses in Danish administrative registry data has only been studied previously in highly selected patient populations. These studies identified high positive predictive values (PPVs) and recurrence risk ratios (RRRs-ratio between probabilities of CHD given family history of CHD and no family history). However, the RRR can be distorted if registry data are used indiscriminately. Here, we investigated the consequences of misclassifications for the RRR using validated diagnoses on Danish patients with familial CHD. Danish citizens are assigned a civil registration number (CPR number) at birth or immigration, which acts as a unique identifier in the Danish registries, thus enabling connection of information from several registries. Utilizing the CPR number, we identified Danish patients with familial CHD and reviewed each patient's file. We compared diagnoses from the registries with those manually assigned, which enabled calculation of the PPVs of diagnoses in the Danish registries, and from this, we deduced the false discovery rate (FDR). To measure the consequences on the RRR, the FDR was applied to a simulated data set with true RRR values of 2 and 10. We validated diagnoses of 2,442 patients from 1,593 families. Of these, 874 patients were misclassified corresponding to an FDR of 36%. Applying this FDR on the simulated data sets, we found that the RRR decreased from 2 and 10 to 1.4 and 5.1, respectively. Lastly, we estimated that 11% of all cases with CHD were familial. We found that approximately one of nine of all cases with CHD are familial, and we also found that 36% of individuals with CHD in administrative medical registries are misclassified, which distort the RRR in simulated scenarios.
AbstractList Congenital heart disease (CHD) occurs in approximately 1% of all live births, and 3% to 8% of these have until now been considered familial cases, defined as the occurrence of two or more affected individuals in a family. The validity of CHD diagnoses in Danish administrative registry data has only been studied previously in highly selected patient populations. These studies identified high positive predictive values (PPVs) and recurrence risk ratios (RRRs-ratio between probabilities of CHD given family history of CHD and no family history). However, the RRR can be distorted if registry data are used indiscriminately. Here, we investigated the consequences of misclassifications for the RRR using validated diagnoses on Danish patients with familial CHD. Danish citizens are assigned a civil registration number (CPR number) at birth or immigration, which acts as a unique identifier in the Danish registries, thus enabling connection of information from several registries. Utilizing the CPR number, we identified Danish patients with familial CHD and reviewed each patient's file. We compared diagnoses from the registries with those manually assigned, which enabled calculation of the PPVs of diagnoses in the Danish registries, and from this, we deduced the false discovery rate (FDR). To measure the consequences on the RRR, the FDR was applied to a simulated data set with true RRR values of 2 and 10. We validated diagnoses of 2,442 patients from 1,593 families. Of these, 874 patients were misclassified corresponding to an FDR of 36%. Applying this FDR on the simulated data sets, we found that the RRR decreased from 2 and 10 to 1.4 and 5.1, respectively. Lastly, we estimated that 11% of all cases with CHD were familial. We found that approximately one of nine of all cases with CHD are familial, and we also found that 36% of individuals with CHD in administrative medical registries are misclassified, which distort the RRR in simulated scenarios.
Author Ellesøe, Sabrina Gade
Jensen, Anders Boeck
Ängquist, Lars Henrik
Larsen, Lars Allan
Brunak, Søren
Hjortdal, Vibeke Elisabeth
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  organization: Novo Nordisk Foundation Center for Protein Research, University of Copenhagen, Copenhagen, Denmark sabrina.ellesoe@cpr.ku.dk soren.brunak@cpr.ku.dk
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  givenname: Anders Boeck
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  givenname: Lars Henrik
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  organization: Institute of Preventive Medicine, Frederiksberg and Bispebjerg Hospital, Frederiksberg, Denmark
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  givenname: Vibeke Elisabeth
  surname: Hjortdal
  fullname: Hjortdal, Vibeke Elisabeth
  organization: Department of Cardiothoracic and Vascular Surgery, Aarhus University Hospital, Aarhus, Denmark
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  email: sabrina.ellesoe@cpr.ku.dk, soren.brunak@cpr.ku.dk
  organization: Novo Nordisk Foundation Center for Protein Research, University of Copenhagen, Copenhagen, Denmark sabrina.ellesoe@cpr.ku.dk soren.brunak@cpr.ku.dk
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CitedBy_id crossref_primary_10_1038_s41467_020_18682_4
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crossref_primary_10_1093_eurheartj_ehx314
crossref_primary_10_1161_CIRCEP_117_005757
crossref_primary_10_1177_2150135115627652
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Keywords congenital heart disease (CHD)
adult congenital heart disease
cardiology
statistics
Language English
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PublicationTitle World journal for pediatric & congenital heart surgery
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References 26957400 - World J Pediatr Congenit Heart Surg. 2016 Mar;7(2):178-9
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Snippet Congenital heart disease (CHD) occurs in approximately 1% of all live births, and 3% to 8% of these have until now been considered familial cases, defined as...
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StartPage 169
SubjectTerms Data Accuracy
Denmark
Genetic Predisposition to Disease
Heart Defects, Congenital - diagnosis
Heart Defects, Congenital - genetics
Humans
Odds Ratio
Registries - standards
Risk Assessment
Title How Suitable Are Registry Data for Recurrence Risk Calculations? Validation of Diagnoses on 1,593 Families With Congenital Heart Disease
URI https://www.ncbi.nlm.nih.gov/pubmed/26957399
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