Observation of non-equilibrium fluctuation in the shear-stress-driven hemoglobin aggregates
Non-equilibrium fluctuations caused by the rearrangement of hemoglobin molecules into an aggregate state under shear stress have been investigated experimentally. The flow response under the shear stress ( σ ) corroborates the presence of contrasting aggregate and rejuvenation states governed by ent...
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| Published in | The European physical journal. E, Soft matter and biological physics Vol. 46; no. 12; p. 131 |
|---|---|
| Main Authors | , , , , , |
| Format | Journal Article |
| Language | English |
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Springer Berlin Heidelberg
01.12.2023
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| Abstract | Non-equilibrium fluctuations caused by the rearrangement of hemoglobin molecules into an aggregate state under shear stress have been investigated experimentally. The flow response under the shear stress (
σ
) corroborates the presence of contrasting aggregate and rejuvenation states governed by entropy production and consumption events. From the time-dependent shear rate fluctuation studies of aggregate states, the probability distribution function (PDF) of the rate of work done is observed to be spread from negative to positive values with a net positive mean. The PDFs follow the steady-state fluctuation theorem, even at a smaller timescale than that desired by the theorem. The behavior of the effective temperature (
T
eff
) that emerges from a non-equilibrium fluctuation and interconnects with the structural restrictions of the aggregate state of our driven system is observed to be within the boundary of the thermodynamic uncertainty. The increase in
T
eff
with the applied
σ
illustrates a phenomenal nonlinear power flux-dependent aggregating behavior in a classic bio-molecular-driven system.
Graphical abstract |
|---|---|
| AbstractList | Non-equilibrium fluctuations caused by the rearrangement of hemoglobin molecules into an aggregate state under shear stress have been investigated experimentally. The flow response under the shear stress (σ) corroborates the presence of contrasting aggregate and rejuvenation states governed by entropy production and consumption events. From the time-dependent shear rate fluctuation studies of aggregate states, the probability distribution function (PDF) of the rate of work done is observed to be spread from negative to positive values with a net positive mean. The PDFs follow the steady-state fluctuation theorem, even at a smaller timescale than that desired by the theorem. The behavior of the effective temperature (Teff) that emerges from a non-equilibrium fluctuation and interconnects with the structural restrictions of the aggregate state of our driven system is observed to be within the boundary of the thermodynamic uncertainty. The increase in Teff with the applied σ illustrates a phenomenal nonlinear power flux-dependent aggregating behavior in a classic bio-molecular-driven system. Non-equilibrium fluctuations caused by the rearrangement of hemoglobin molecules into an aggregate state under shear stress have been investigated experimentally. The flow response under the shear stress (σ) corroborates the presence of contrasting aggregate and rejuvenation states governed by entropy production and consumption events. From the time-dependent shear rate fluctuation studies of aggregate states, the probability distribution function (PDF) of the rate of work done is observed to be spread from negative to positive values with a net positive mean. The PDFs follow the steady-state fluctuation theorem, even at a smaller timescale than that desired by the theorem. The behavior of the effective temperature (T ) that emerges from a non-equilibrium fluctuation and interconnects with the structural restrictions of the aggregate state of our driven system is observed to be within the boundary of the thermodynamic uncertainty. The increase in T with the applied σ illustrates a phenomenal nonlinear power flux-dependent aggregating behavior in a classic bio-molecular-driven system. Non-equilibrium fluctuations caused by the rearrangement of hemoglobin molecules into an aggregate state under shear stress have been investigated experimentally. The flow response under the shear stress ( σ ) corroborates the presence of contrasting aggregate and rejuvenation states governed by entropy production and consumption events. From the time-dependent shear rate fluctuation studies of aggregate states, the probability distribution function (PDF) of the rate of work done is observed to be spread from negative to positive values with a net positive mean. The PDFs follow the steady-state fluctuation theorem, even at a smaller timescale than that desired by the theorem. The behavior of the effective temperature ( T eff ) that emerges from a non-equilibrium fluctuation and interconnects with the structural restrictions of the aggregate state of our driven system is observed to be within the boundary of the thermodynamic uncertainty. The increase in T eff with the applied σ illustrates a phenomenal nonlinear power flux-dependent aggregating behavior in a classic bio-molecular-driven system. Graphical abstract |
| ArticleNumber | 131 |
| Author | Bandyopadhyay, M. Mallik, G. Kumari, P. Kabiraj, A. Dash, P. P. Rath, S. |
| Author_xml | – sequence: 1 givenname: A. surname: Kabiraj fullname: Kabiraj, A. organization: Nanostructure and Soft Matter Physics Laboratory, School of Basic Sciences, Indian Institute of Technology Bhubaneswar – sequence: 2 givenname: G. surname: Mallik fullname: Mallik, G. organization: Nanostructure and Soft Matter Physics Laboratory, School of Basic Sciences, Indian Institute of Technology Bhubaneswar – sequence: 3 givenname: P. P. surname: Dash fullname: Dash, P. P. organization: Nanostructure and Soft Matter Physics Laboratory, School of Basic Sciences, Indian Institute of Technology Bhubaneswar – sequence: 4 givenname: P. surname: Kumari fullname: Kumari, P. organization: Nanostructure and Soft Matter Physics Laboratory, School of Basic Sciences, Indian Institute of Technology Bhubaneswar – sequence: 5 givenname: M. surname: Bandyopadhyay fullname: Bandyopadhyay, M. organization: Statistical Mechanics Laboratory, School of Basic Sciences, Indian Institute of Technology Bhubaneswar – sequence: 6 givenname: S. orcidid: 0000-0002-9017-1799 surname: Rath fullname: Rath, S. email: srath@iitbbs.ac.in organization: Nanostructure and Soft Matter Physics Laboratory, School of Basic Sciences, Indian Institute of Technology Bhubaneswar |
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| Cites_doi | 10.1038/s41598-016-0028-x 10.1016/j.jpha.2016.02.004 10.1103/PhysRevE.50.1645 10.1002/jsfa.869 10.1063/1.5016913 10.1140/epje/i2011-11117-5 10.1103/PhysRevLett.114.158101 10.1038/s41567-019-0702-6 10.1529/biophysj.108.138040 10.3389/fphys.2021.775584 10.1122/1.551088 10.1007/BF02179860 10.1122/1.1459447 10.3389/fphys.2019.01329 10.1103/PhysRevLett.91.110601 10.1103/PhysRevLett.78.2690 10.1103/PhysRevLett.74.2694 10.1103/PhysRevE.85.041404 10.1103/PhysRevLett.92.164301 10.1371/journal.pone.0105357 10.1088/1742-5468/2016/08/083203 10.1371/journal.pcbi.1000288 10.1088/0034-4885/72/9/096601 10.1122/1.3045803 10.1103/PhysRevLett.123.090604 10.1039/c1sm05462g 10.1209/0295-5075/87/38004 10.1016/S0268-005X(01)00052-2 10.1039/c0sm01312a 10.1146/annurev-fluid-121108-145434 10.1039/c2sm06950d 10.1103/PhysRevResearch.2.043237 10.1017/jfm.2016.782 |
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| SubjectTerms | Biological and Medical Physics Biophysics Complex Fluids and Microfluidics Complex Systems Distribution functions Equilibrium Hemoglobin Nanotechnology Physics Physics and Astronomy Polymer Sciences Probability distribution functions Regular Article - Flowing Matter Shear rate Shear stress Soft and Granular Matter Surfaces and Interfaces Theorems Thin Films |
| Title | Observation of non-equilibrium fluctuation in the shear-stress-driven hemoglobin aggregates |
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