Companilactobacillus pabuli sp. nov., a lactic acid bacterium isolated from animal feed

A Gram-positive, facultative anaerobic, catalase-negative, non-motile, non-spore-forming and rod-shaped lactic acid bacterium strain, denoted as NFFJ11 and isolated from total mixed fermentation feed in the Republic of Korea, was characterized through polyphasic approaches, including sequence analys...

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Published inInternational journal of systematic and evolutionary microbiology Vol. 71; no. 3
Main Authors Jung, Ji Young, Kang, Hye Kyeong, Jin, Hyun Mi, Han, Sang-Soo, Kwon, Young Chul, Eun, Jong Jun, Kim, Sang Cheol, Seo, Min Jeong, Ryu, Byung-Gon, Chung, Eu Jin
Format Journal Article
LanguageEnglish
Published England 01.01.2021
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Abstract A Gram-positive, facultative anaerobic, catalase-negative, non-motile, non-spore-forming and rod-shaped lactic acid bacterium strain, denoted as NFFJ11 and isolated from total mixed fermentation feed in the Republic of Korea, was characterized through polyphasic approaches, including sequence analyses of the 16S rRNA gene and housekeeping genes ( and ), determination of average nucleotide identity and DNA-DNA hybridization, fatty acid methyl ester analysis, and phenotypic characterization. Phylogenetic analyses based on 16S rRNA, and gene sequences revealed that strain NFFJ11 belonged to the genus . The 16S rRNA gene sequence of strain NFFJ11 exhibited high similarity to S215 (99.66 %), Rv4 na (99.53 %), LMG 23699 (99.19 %), YM 0097 (99.06 %), HBUAS52074 (98.86 %) and S4-3 (98.66 %). However, average nucleotide identity and DNA-DNA hybridization values for these type strains were in the range of 79.90-92.93 % and 23.80-49.30 %, respectively, which offer evidence that strain NFFJ11 belongs to a novel species of the genus . The cell-wall peptidoglycan type was A4α (l-Lys-d-Asp) and the G+C content of the genomic DNA was 35.7 mol%. The main fatty acids of strain NFFJ11 were C 9 (43.3 %), C (20.1 %) and summed feature 7 (18.3 %; comprising any combination of C 7 , C 6 and C cyclo 10 ). Through polyphasic taxonomic analysis, it was observed that strain NFFJ11 represents a novel species belonging to the genus , for which the name sp. nov. is proposed. The type strain is NFFJ11 (= KACC 21771 = JCM 34088 ).
AbstractList A Gram-positive, facultative anaerobic, catalase-negative, non-motile, non-spore-forming and rod-shaped lactic acid bacterium strain, denoted as NFFJ11 T and isolated from total mixed fermentation feed in the Republic of Korea, was characterized through polyphasic approaches, including sequence analyses of the 16S rRNA gene and housekeeping genes ( rpoA and pheS ), determination of average nucleotide identity and in silico DNA–DNA hybridization, fatty acid methyl ester analysis, and phenotypic characterization. Phylogenetic analyses based on 16S rRNA, rpoA and pheS gene sequences revealed that strain NFFJ11 T belonged to the genus Companilactobacillus . The 16S rRNA gene sequence of strain NFFJ11 T exhibited high similarity to Companilactobacillus formosensis S215 T (99.66 %), Companilactobacillus farciminis Rv4 na T (99.53 %), Companilactobacillus crustorum LMG 23699 T (99.19 %), Companilactobacillus futsaii YM 0097 T (99.06 %), Companilactobacillus zhachilii HBUAS52074 T (98.86 %) and Companilactobacillus heilongiiangensis S4-3 T (98.66 %). However, average nucleotide identity and in silico DNA–DNA hybridization values for these type strains were in the range of 79.90–92.93 % and 23.80–49.30 %, respectively, which offer evidence that strain NFFJ11 T belongs to a novel species of the genus Companilactobacillus . The cell-wall peptidoglycan type was A4α ( l -Lys –d -Asp) and the G+C content of the genomic DNA was 35.7 mol%. The main fatty acids of strain NFFJ11 T were C 18 : 1  ω 9 c (43.3 %), C 16 : 0 (20.1 %) and summed feature 7 (18.3 %; comprising any combination of C 19 : 1  ω 7 c , C 19 : 1  ω 6 c and C 19 : 0 cyclo ω 10 c ). Through polyphasic taxonomic analysis, it was observed that strain NFFJ11 T represents a novel species belonging to the genus Companilactobacillus , for which the name Companilactobacillus pabuli sp. nov. is proposed. The type strain is NFFJ11 T (= KACC 21771 T = JCM 34088 T ).
A Gram-positive, facultative anaerobic, catalase-negative, non-motile, non-spore-forming and rod-shaped lactic acid bacterium strain, denoted as NFFJ11 and isolated from total mixed fermentation feed in the Republic of Korea, was characterized through polyphasic approaches, including sequence analyses of the 16S rRNA gene and housekeeping genes ( and ), determination of average nucleotide identity and DNA-DNA hybridization, fatty acid methyl ester analysis, and phenotypic characterization. Phylogenetic analyses based on 16S rRNA, and gene sequences revealed that strain NFFJ11 belonged to the genus . The 16S rRNA gene sequence of strain NFFJ11 exhibited high similarity to S215 (99.66 %), Rv4 na (99.53 %), LMG 23699 (99.19 %), YM 0097 (99.06 %), HBUAS52074 (98.86 %) and S4-3 (98.66 %). However, average nucleotide identity and DNA-DNA hybridization values for these type strains were in the range of 79.90-92.93 % and 23.80-49.30 %, respectively, which offer evidence that strain NFFJ11 belongs to a novel species of the genus . The cell-wall peptidoglycan type was A4α (l-Lys-d-Asp) and the G+C content of the genomic DNA was 35.7 mol%. The main fatty acids of strain NFFJ11 were C 9 (43.3 %), C (20.1 %) and summed feature 7 (18.3 %; comprising any combination of C 7 , C 6 and C cyclo 10 ). Through polyphasic taxonomic analysis, it was observed that strain NFFJ11 represents a novel species belonging to the genus , for which the name sp. nov. is proposed. The type strain is NFFJ11 (= KACC 21771 = JCM 34088 ).
Author Jung, Ji Young
Chung, Eu Jin
Kwon, Young Chul
Kim, Sang Cheol
Jin, Hyun Mi
Kang, Hye Kyeong
Ryu, Byung-Gon
Seo, Min Jeong
Han, Sang-Soo
Eun, Jong Jun
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new species
Companilactobacillus pabuli sp. nov
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Snippet A Gram-positive, facultative anaerobic, catalase-negative, non-motile, non-spore-forming and rod-shaped lactic acid bacterium strain, denoted as NFFJ11 and...
A Gram-positive, facultative anaerobic, catalase-negative, non-motile, non-spore-forming and rod-shaped lactic acid bacterium strain, denoted as NFFJ11 T and...
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Title Companilactobacillus pabuli sp. nov., a lactic acid bacterium isolated from animal feed
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