Diversity and geographic distribution of fungal strains infecting field-grown common bean (Phaseolus vulgaris L.) in Tunisia
A collection of 103 fungal strains was established from infected common bean plants ( Phaseolus vulgaris L.) field-grown in three geographic regions from Tunisia and known for their long history in bean culture; Boucharray, Chatt-Mariem, and Metline. The fungal strain collection was established from...
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Published in | European journal of plant pathology Vol. 153; no. 3; pp. 947 - 955 |
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Main Authors | , , , |
Format | Journal Article |
Language | English |
Published |
Dordrecht
Springer Netherlands
01.03.2019
Springer Nature B.V |
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Abstract | A collection of 103 fungal strains was established from infected common bean plants (
Phaseolus vulgaris
L.) field-grown in three geographic regions from Tunisia and known for their long history in bean culture; Boucharray, Chatt-Mariem, and Metline. The fungal strain collection was established from common bean root and aerial parts. The pathogenicity test carried out on germinated seedlings showed that among the fungal collection, 41% of fungal strains were assigned to be highly pathogenic. In fact, serious cases of seedling damping-off, as well as a significant reduction in root and shoot biomass in cv. Coco blanc were noticed (up to 90% biomass reduction) considering fungal strains from the three prospected localities. The identification of fungal isolates belonging to this high pathogenicity class, based on the internal transcribed spacer region (ITS), showed a wide generic and specific diversity among common bean pathogenic fungi in Tunisia.
Fusarium
spp. strains were dominant and represented 67% of the characterized fungal collection. Fungal genera including
Alternaria
(22%),
Rhizoctonia
(4%),
Ascomycota
(4%),
Macrophomina
(10%) and
Phoma
(4%) were also reported. The highest richness levels were found in the Chatt-Mariem and Boucharray regions, showing the highest generic and interspecific diversity. In this work, we revealed also a variability in the abundance and geographic distribution of fungal species between the three prospected regions. Fungal strains infecting common bean in Metline were represented exclusively by
Fusarium oxysporum
. However, the genus
Fusarium
represented about 66% of fungal strains recovered from Boucharray, and only 20% from Chatt-Mariem. The genus
Alternaria
represented 11% and 40% of total fungal isolates in Boucharray and Chatt-Mariem, respectively, and was isolated only from the foliar parts of diseased common bean plants. The present work represents an important database that should be considered for surveying common bean fungal diseases. |
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AbstractList | A collection of 103 fungal strains was established from infected common bean plants (
Phaseolus vulgaris
L.) field-grown in three geographic regions from Tunisia and known for their long history in bean culture; Boucharray, Chatt-Mariem, and Metline. The fungal strain collection was established from common bean root and aerial parts. The pathogenicity test carried out on germinated seedlings showed that among the fungal collection, 41% of fungal strains were assigned to be highly pathogenic. In fact, serious cases of seedling damping-off, as well as a significant reduction in root and shoot biomass in cv. Coco blanc were noticed (up to 90% biomass reduction) considering fungal strains from the three prospected localities. The identification of fungal isolates belonging to this high pathogenicity class, based on the internal transcribed spacer region (ITS), showed a wide generic and specific diversity among common bean pathogenic fungi in Tunisia.
Fusarium
spp. strains were dominant and represented 67% of the characterized fungal collection. Fungal genera including
Alternaria
(22%),
Rhizoctonia
(4%),
Ascomycota
(4%),
Macrophomina
(10%) and
Phoma
(4%) were also reported. The highest richness levels were found in the Chatt-Mariem and Boucharray regions, showing the highest generic and interspecific diversity. In this work, we revealed also a variability in the abundance and geographic distribution of fungal species between the three prospected regions. Fungal strains infecting common bean in Metline were represented exclusively by
Fusarium oxysporum
. However, the genus
Fusarium
represented about 66% of fungal strains recovered from Boucharray, and only 20% from Chatt-Mariem. The genus
Alternaria
represented 11% and 40% of total fungal isolates in Boucharray and Chatt-Mariem, respectively, and was isolated only from the foliar parts of diseased common bean plants. The present work represents an important database that should be considered for surveying common bean fungal diseases. A collection of 103 fungal strains was established from infected common bean plants (Phaseolus vulgaris L.) field-grown in three geographic regions from Tunisia and known for their long history in bean culture; Boucharray, Chatt-Mariem, and Metline. The fungal strain collection was established from common bean root and aerial parts. The pathogenicity test carried out on germinated seedlings showed that among the fungal collection, 41% of fungal strains were assigned to be highly pathogenic. In fact, serious cases of seedling damping-off, as well as a significant reduction in root and shoot biomass in cv. Coco blanc were noticed (up to 90% biomass reduction) considering fungal strains from the three prospected localities. The identification of fungal isolates belonging to this high pathogenicity class, based on the internal transcribed spacer region (ITS), showed a wide generic and specific diversity among common bean pathogenic fungi in Tunisia. Fusarium spp. strains were dominant and represented 67% of the characterized fungal collection. Fungal genera including Alternaria (22%), Rhizoctonia (4%), Ascomycota (4%), Macrophomina (10%) and Phoma (4%) were also reported. The highest richness levels were found in the Chatt-Mariem and Boucharray regions, showing the highest generic and interspecific diversity. In this work, we revealed also a variability in the abundance and geographic distribution of fungal species between the three prospected regions. Fungal strains infecting common bean in Metline were represented exclusively by Fusarium oxysporum. However, the genus Fusarium represented about 66% of fungal strains recovered from Boucharray, and only 20% from Chatt-Mariem. The genus Alternaria represented 11% and 40% of total fungal isolates in Boucharray and Chatt-Mariem, respectively, and was isolated only from the foliar parts of diseased common bean plants. The present work represents an important database that should be considered for surveying common bean fungal diseases. |
Author | Romdhane, Samir Ben Sendi, Yosra Mrabet, Moncef Mhamdi, Ridha |
Author_xml | – sequence: 1 givenname: Yosra surname: Sendi fullname: Sendi, Yosra organization: Faculty of Sciences of Tunis, University of Tunis El Manar, Laboratory of Legumes, Centre of Biotechnology of Borj-Cédria (CBBC) – sequence: 2 givenname: Samir Ben surname: Romdhane fullname: Romdhane, Samir Ben organization: Laboratory of Legumes, Centre of Biotechnology of Borj-Cédria (CBBC) – sequence: 3 givenname: Ridha surname: Mhamdi fullname: Mhamdi, Ridha organization: Laboratory of Legumes, Centre of Biotechnology of Borj-Cédria (CBBC) – sequence: 4 givenname: Moncef surname: Mrabet fullname: Mrabet, Moncef email: moncef_mrabet@yahoo.fr organization: Laboratory of Legumes, Centre of Biotechnology of Borj-Cédria (CBBC) |
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Cites_doi | 10.1094/PHYTO.1997.87.1.108 10.1146/annurev.phyto.40.120501.101443 10.5958/0976-0547.2015.00048.8 10.1111/j.1365-3059.2010.02414.x 10.1094/PHYTO-09-10-0252 10.1016/S0065-2164(03)53007-6 10.1080/17550874.2011.644343 10.21273/JASHS.130.5.700 10.1111/j.1365-3059.2010.02411.x 10.1016/j.tifs.2003.07.002 10.15446/abc.v19n2.39154 10.1111/j.1469-8137.1988.tb03698.x 10.1590/S1415-47572007000600013 10.1080/09670874.2014.993001 10.1094/PDIS.2000.84.7.807B 10.3109/19401736.2013.878912 10.4314/jab.v61i0.85597 10.1094/PD-80-0853 10.7150/ijbs.4.330 10.4238/vol8-3gmr605 10.1007/978-90-481-9735-4_2 |
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Copyright | Koninklijke Nederlandse Planteziektenkundige Vereniging 2018 European Journal of Plant Pathology is a copyright of Springer, (2018). All Rights Reserved. |
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Snippet | A collection of 103 fungal strains was established from infected common bean plants (
Phaseolus vulgaris
L.) field-grown in three geographic regions from... A collection of 103 fungal strains was established from infected common bean plants (Phaseolus vulgaris L.) field-grown in three geographic regions from... |
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SubjectTerms | Agriculture Alternaria Biomass Biomedical and Life Sciences Collection Damping Damping-off Ecology Fungal diseases Fungi Fusarium Fusarium oxysporum Geographical distribution Interspecific Life Sciences Pathogenicity Pathogens Phaseolus vulgaris Plant diseases Plant Pathology Plant Sciences Reduction Seedlings Spacer region Surveying |
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Title | Diversity and geographic distribution of fungal strains infecting field-grown common bean (Phaseolus vulgaris L.) in Tunisia |
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