Genetic susceptibility to Behçet’s syndrome is associated with NRAMP1 (SLC11A1) polymorphism in Turkish patients
Natural resistance associated macrophage protein 1 (NRAMP1), also named as solute carrier family 11 member A1 gene (SLC11A1), has multiple pleiotropic effects on macrophage activation pathways such as up-regulation of the CXC chemokine K C, tumor necrosis factor α (TNF-α), interleukin-1 b (IL-1 b),...
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Published in | Rheumatology international Vol. 29; no. 7; pp. 787 - 791 |
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Main Authors | , , , , |
Format | Journal Article |
Language | English |
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Springer-Verlag
01.05.2009
Springer Nature B.V |
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Abstract | Natural resistance associated macrophage protein 1 (NRAMP1), also named as solute carrier family 11 member A1 gene (SLC11A1), has multiple pleiotropic effects on macrophage activation pathways such as up-regulation of the CXC chemokine
K
C, tumor necrosis factor α (TNF-α), interleukin-1 b (IL-1 b), inducible nitric oxide syntase (iNOS), and major histocompatibility complex (MHC) class II expression. Since NRAMP1 plays a role in the up-regulation of the TNF-α, iNOS and MHC expression, it may also be a candidate gene for Behçet’s syndrome (BS). We analyzed the association of NRAMP1 polymorphisms [(GT)
n
, INT4, 3′UTR and D543N] in 102 Turkish patients with BS and 102 healthy subjects by using amplification refractory mutation system-polymerase chain reaction (ARMS–PCR). We found a significant association between BS and NRAMP1 INT4 G/C allele frequency (
p
= 0.004, OR = 1.88, 95% CI = 1.21–2.93). However, there were no significant differences in the distribution of allele frequencies of NRAMP1 (GT)
n
, 3′UTR, D543N polymorphisms between BS patients and healthy controls. There was also no correlation between NRAMP1 polymorphisms and clinical manifestations of BS. Our study suggests that NRAMP1 may be one of the plausible candidate genes for BS. However, it is likely that INT4 polymorphism is not disease-specific and seems to be common to immune-mediated diseases. |
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AbstractList | Natural resistance associated macrophage protein 1 (NRAMP1), also named as solute carrier family 11 member A1 gene (SLC11A1), has multiple pleiotropic effects on macrophage activation pathways such as up-regulation of the CXC chemokine KC, tumor necrosis factor α (TNF-α), interleukin-1 b (IL-1 b), inducible nitric oxide syntase (iNOS), and major histocompatibility complex (MHC) class II expression. Since NRAMP1 plays a role in the up-regulation of the TNF-α, iNOS and MHC expression, it may also be a candidate gene for Behçet's syndrome (BS). We analyzed the association of NRAMP1 polymorphisms [(GT)^sub n^, INT4, 3'UTR and D543N] in 102 Turkish patients with BS and 102 healthy subjects by using amplification refractory mutation system-polymerase chain reaction (ARMS-PCR). We found a significant association between BS and NRAMP1 INT4 G/C allele frequency (p = 0.004, OR = 1.88, 95% CI = 1.21-2.93). However, there were no significant differences in the distribution of allele frequencies of NRAMP1 (GT)^sub n^, 3'UTR, D543N polymorphisms between BS patients and healthy controls. There was also no correlation between NRAMP1 polymorphisms and clinical manifestations of BS. Our study suggests that NRAMP1 may be one of the plausible candidate genes for BS. However, it is likely that INT4 polymorphism is not disease-specific and seems to be common to immune-mediated diseases.[PUBLICATION ABSTRACT] Natural resistance associated macrophage protein 1 (NRAMP1), also named as solute carrier family 11 member A1 gene (SLC11A1), has multiple pleiotropic effects on macrophage activation pathways such as up-regulation of the CXC chemokine KC, tumor necrosis factor alpha (TNF-alpha), interleukin-1 b (IL-1 b), inducible nitric oxide syntase (iNOS), and major histocompatibility complex (MHC) class II expression. Since NRAMP1 plays a role in the up-regulation of the TNF-alpha, iNOS and MHC expression, it may also be a candidate gene for Behçet's syndrome (BS). We analyzed the association of NRAMP1 polymorphisms [(GT)( n ), INT4, 3'UTR and D543N] in 102 Turkish patients with BS and 102 healthy subjects by using amplification refractory mutation system-polymerase chain reaction (ARMS-PCR). We found a significant association between BS and NRAMP1 INT4 G/C allele frequency (p = 0.004, OR = 1.88, 95% CI = 1.21-2.93). However, there were no significant differences in the distribution of allele frequencies of NRAMP1 (GT)( n ), 3'UTR, D543N polymorphisms between BS patients and healthy controls. There was also no correlation between NRAMP1 polymorphisms and clinical manifestations of BS. Our study suggests that NRAMP1 may be one of the plausible candidate genes for BS. However, it is likely that INT4 polymorphism is not disease-specific and seems to be common to immune-mediated diseases. Natural resistance associated macrophage protein 1 (NRAMP1), also named as solute carrier family 11 member A1 gene (SLC11A1), has multiple pleiotropic effects on macrophage activation pathways such as up-regulation of the CXC chemokine K C, tumor necrosis factor α (TNF-α), interleukin-1 b (IL-1 b), inducible nitric oxide syntase (iNOS), and major histocompatibility complex (MHC) class II expression. Since NRAMP1 plays a role in the up-regulation of the TNF-α, iNOS and MHC expression, it may also be a candidate gene for Behçet’s syndrome (BS). We analyzed the association of NRAMP1 polymorphisms [(GT) n , INT4, 3′UTR and D543N] in 102 Turkish patients with BS and 102 healthy subjects by using amplification refractory mutation system-polymerase chain reaction (ARMS–PCR). We found a significant association between BS and NRAMP1 INT4 G/C allele frequency ( p = 0.004, OR = 1.88, 95% CI = 1.21–2.93). However, there were no significant differences in the distribution of allele frequencies of NRAMP1 (GT) n , 3′UTR, D543N polymorphisms between BS patients and healthy controls. There was also no correlation between NRAMP1 polymorphisms and clinical manifestations of BS. Our study suggests that NRAMP1 may be one of the plausible candidate genes for BS. However, it is likely that INT4 polymorphism is not disease-specific and seems to be common to immune-mediated diseases. Natural resistance associated macrophage protein 1 (NRAMP1), also named as solute carrier family 11 member A1 gene (SLC11A1), has multiple pleiotropic effects on macrophage activation pathways such as up-regulation of the CXC chemokine KC, tumor necrosis factor Delta *a (TNF- Delta *a), interleukin-1 b (IL-1 b), inducible nitric oxide syntase (iNOS), and major histocompatibility complex (MHC) class II expression. Since NRAMP1 plays a role in the up-regulation of the TNF- Delta *a, iNOS and MHC expression, it may also be a candidate gene for Behcet's syndrome (BS). We analyzed the association of NRAMP1 polymorphisms [(GT) n , INT4, 3'UTR and D543N] in 102 Turkish patients with BS and 102 healthy subjects by using amplification refractory mutation system-polymerase chain reaction (ARMS--PCR). We found a significant association between BS and NRAMP1 INT4 G/C allele frequency (p = 0.004, OR = 1.88, 95% CI = 1.21--2.93). However, there were no significant differences in the distribution of allele frequencies of NRAMP1 (GT) n , 3'UTR, D543N polymorphisms between BS patients and healthy controls. There was also no correlation between NRAMP1 polymorphisms and clinical manifestations of BS. Our study suggests that NRAMP1 may be one of the plausible candidate genes for BS. However, it is likely that INT4 polymorphism is not disease-specific and seems to be common to immune-mediated diseases. |
Author | Hatemi, Gulen Hamuryudan, Vedat Ateş, Omer Topal-Sarıkaya, Aysegul Dalyan, Levent |
Author_xml | – sequence: 1 givenname: Omer surname: Ateş fullname: Ateş, Omer email: omerates27@yahoo.com organization: Department of Molecular Biology and Genetics, Science Faculty, Istanbul University, Department of Medical Biology, Medical Faculty, Gaziosmanpasa University – sequence: 2 givenname: Levent surname: Dalyan fullname: Dalyan, Levent organization: Department of Molecular Biology and Genetics, Science Faculty, Istanbul University – sequence: 3 givenname: Gulen surname: Hatemi fullname: Hatemi, Gulen organization: Rheumatology Department, Cerrahpasa Medical Faculty, Istanbul University – sequence: 4 givenname: Vedat surname: Hamuryudan fullname: Hamuryudan, Vedat organization: Rheumatology Department, Cerrahpasa Medical Faculty, Istanbul University – sequence: 5 givenname: Aysegul surname: Topal-Sarıkaya fullname: Topal-Sarıkaya, Aysegul organization: Department of Molecular Biology and Genetics, Science Faculty, Istanbul University, Research and Application Center for Biotechnology and Genetic Engineering, Istanbul University |
BackLink | https://www.ncbi.nlm.nih.gov/pubmed/18998137$$D View this record in MEDLINE/PubMed |
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Cites_doi | 10.1016/S0022-3476(99)70333-1 10.1093/rheumatology/kel329 10.1007/s10875-007-9134-7 10.1080/03009740600704221 10.1016/j.metabol.2004.12.006 10.1093/nar/16.3.1215 10.1086/513830 10.1034/j.1399-0039.2002.590410.x 10.1056/NEJM199803053381002 10.1038/ncprheum0436 10.1016/S0165-2478(98)00127-8 10.1002/1529-0131(200006)43:6<1397::AID-ANR25>3.0.CO;2-6 10.1016/j.bcmd.2004.04.003 10.1086/341775 10.1016/S0039-6060(97)90006-4 10.1136/jmg.33.8.672 10.1002/1529-0131(200101)44:1<239::AID-ANR31>3.0.CO;2-X 10.1136/ard.60.11.996 10.1165/ajrcmb.22.6.3745 |
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Keywords | Behçet’s syndrome NRAMP1 (SLC11A1) Immune-mediated diseases Polymorphism |
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SubjectTerms | 3' Untranslated Regions - genetics Adult Behcet Syndrome - ethnology Behcet Syndrome - genetics Behcet Syndrome - metabolism Cation Transport Proteins - genetics Cytokines - metabolism DNA Mutational Analysis Female Gene Frequency Genes Genetic Markers - genetics Genetic Predisposition to Disease - ethnology Genetic Predisposition to Disease - genetics Genetic Testing Genotype Histocompatibility Antigens - metabolism Humans Male Medicine Medicine & Public Health Middle Aged Nitric oxide Nitric Oxide Synthase Type II - metabolism Original Article Polymorphism, Genetic - genetics Rheumatology Turkey - ethnology |
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Title | Genetic susceptibility to Behçet’s syndrome is associated with NRAMP1 (SLC11A1) polymorphism in Turkish patients |
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