Isolation and characterization of microsatellite markers in Melia volkensii Gurke

Melia volkensii Gurke is a drought-tolerant tree endemic to the drylands of eastern Africa. In Kenya, the tree has been overexploited for use as timber, and domestication efforts have demonstrated diversity in both genetically controlled tree growth and form. Genetic markers, however, have not yet b...

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Published inConservation genetics resources Vol. 4; no. 2; pp. 395 - 398
Main Authors Hanaoka, So, Muturi, Gabriel M., Watanabe, Atsushi
Format Journal Article
LanguageEnglish
Published Dordrecht Springer Netherlands 01.06.2012
Springer Nature B.V
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Abstract Melia volkensii Gurke is a drought-tolerant tree endemic to the drylands of eastern Africa. In Kenya, the tree has been overexploited for use as timber, and domestication efforts have demonstrated diversity in both genetically controlled tree growth and form. Genetic markers, however, have not yet been developed to support conservation and breeding efforts in the species. In the present study, 15 novel microsatellite markers were developed for M. volkensii Gurke. Genetic variation at these loci was examined in 89 samples from three natural populations in Kenya. All loci were highly polymorphic with mean number of alleles, expected heterozygosity and observed heterozygosity per locus in samples collected from three natural populations in Kenya having values of 9.92, 0.72 and 0.67, respectively. The microsatellite markers developed in the present study will serve as useful tools in the study of population genetics, ecology, conservation and management of M. volkensii .
AbstractList Melia volkensii Gurke is a drought-tolerant tree endemic to the drylands of eastern Africa. In Kenya, the tree has been overexploited for use as timber, and domestication efforts have demonstrated diversity in both genetically controlled tree growth and form. Genetic markers, however, have not yet been developed to support conservation and breeding efforts in the species. In the present study, 15 novel microsatellite markers were developed for M. volkensii Gurke. Genetic variation at these loci was examined in 89 samples from three natural populations in Kenya. All loci were highly polymorphic with mean number of alleles, expected heterozygosity and observed heterozygosity per locus in samples collected from three natural populations in Kenya having values of 9.92, 0.72 and 0.67, respectively. The microsatellite markers developed in the present study will serve as useful tools in the study of population genetics, ecology, conservation and management of M. volkensii.
Melia volkensii Gurke is a drought-tolerant tree endemic to the drylands of eastern Africa. In Kenya, the tree has been overexploited for use as timber, and domestication efforts have demonstrated diversity in both genetically controlled tree growth and form. Genetic markers, however, have not yet been developed to support conservation and breeding efforts in the species. In the present study, 15 novel microsatellite markers were developed for M. volkensii Gurke. Genetic variation at these loci was examined in 89 samples from three natural populations in Kenya. All loci were highly polymorphic with mean number of alleles, expected heterozygosity and observed heterozygosity per locus in samples collected from three natural populations in Kenya having values of 9.92, 0.72 and 0.67, respectively. The microsatellite markers developed in the present study will serve as useful tools in the study of population genetics, ecology, conservation and management of M. volkensii .
Author Muturi, Gabriel M.
Hanaoka, So
Watanabe, Atsushi
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10.1111/j.1471-8286.2005.01155.x
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10.2144/99273st03
10.1093/oxfordjournals.jhered.a111573
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Keywords Microsatellite
Meliaceae
Population genetics
Simple Sequence Repeat (SSR)
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Snippet Melia volkensii Gurke is a drought-tolerant tree endemic to the drylands of eastern Africa. In Kenya, the tree has been overexploited for use as timber, and...
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SubjectTerms Animal Genetics and Genomics
Biodiversity
Biomedical and Life Sciences
Conservation
Conservation Biology/Ecology
Domestication
Drought resistance
Ecology
Evolutionary Biology
Genetic diversity
Genetic markers
Heterozygosity
Life Sciences
Melia volkensii
Microsatellites
Plant Genetics and Genomics
Population genetics
Population studies
Technical Note
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Title Isolation and characterization of microsatellite markers in Melia volkensii Gurke
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