Paddy System with a Hybrid Rice Enhances Cyanobacteria Nostoc and Increases N2 Fixation
Biological nitrogen (N) fixation (BNF) plays a significant role in maintaining soil fertility in paddy field ecosystems. Rice variety influences BNF, but how different rice varieties regulate BNF and associated diazotroph communities has not been quantified. Airtight, field-based 15N2-labelling grow...
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Published in | Pedosphere Vol. 29; no. 3; pp. 374 - 387 |
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Main Authors | , , , , , , , , |
Format | Journal Article |
Language | English |
Published |
Beijing
Elsevier Ltd
01.06.2019
Elsevier Science Ltd State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008 China University of Chinese Academy of Sciences, Beijing 100049 China%State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008 China%Institute of Agricultural Sciences in the Tropics(Hans-Ruthenberg-Institute), University of Hohenheim, Stuttgart 70593 Germany |
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Abstract | Biological nitrogen (N) fixation (BNF) plays a significant role in maintaining soil fertility in paddy field ecosystems. Rice variety influences BNF, but how different rice varieties regulate BNF and associated diazotroph communities has not been quantified. Airtight, field-based 15N2-labelling growth chamber experiments were used to assess the BNF capacity of different rice varieties. In addition, both the 16S rRNA and nifH genes were sequenced to assess the influence of different rice varieties on bacterial and diazotrophic communities in paddy soils. After subjecting a rice-soil system to 74 d of continuous airtight, field-based 15N2 labelling in pots in a growth chamber, the amounts of fixed N were 22.3 and 38.9 kg ha–1 in inbred japonica (W23) and hybrid indica (IIY) rice cultivars planted in the rice-soil systems, respectively, and only 1%–2.5% of the fixed N was allocated to the rice plants and weeds. A greater abundance of diazotrophs was found in the surface soil (0–1 cm) under IIY than under W23. Sequencing of the 16S rRNA gene showed significantly greater abundances of the cyanobacterial genera Nostoc, Anabaena, and Cylindrospermum under IIY than under W23. Sequencing of the nifH gene also showed a significantly greater abundance of Nostoc under IIY than under W23. These results indicate that the hybrid rice cultivar (IIY) promoted BNF to a greater extent than the inbred rice cultivar (W23) and that the increase in BNF might have been due to the enhanced heterocystous cyanobacteria Nostoc. |
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AbstractList | Biological nitrogen (N) fixation (BNF) plays a significant role in maintaining soil fertility in paddy field ecosystems. Rice variety influences BNF, but how different rice varieties regulate BNF and associated diazotroph communities has not been quantified. Airtight, field-based 15N2-labelling growth chamber experiments were used to assess the BNF capacity of different rice varieties. In addition, both the 16S rRNA and nifH genes were sequenced to assess the influence of different rice varieties on bacterial and diazotrophic communities in paddy soils. After subjecting a rice-soil system to 74 d of continuous airtight, field-based 15N2 labelling in pots in a growth chamber, the amounts of fixed N were 22.3 and 38.9 kg ha–1 in inbred japonica (W23) and hybrid indica (IIY) rice cultivars planted in the rice-soil systems, respectively, and only 1%–2.5% of the fixed N was allocated to the rice plants and weeds. A greater abundance of diazotrophs was found in the surface soil (0–1 cm) under IIY than under W23. Sequencing of the 16S rRNA gene showed significantly greater abundances of the cyanobacterial genera Nostoc, Anabaena, and Cylindrospermum under IIY than under W23. Sequencing of the nifH gene also showed a significantly greater abundance of Nostoc under IIY than under W23. These results indicate that the hybrid rice cultivar (IIY) promoted BNF to a greater extent than the inbred rice cultivar (W23) and that the increase in BNF might have been due to the enhanced heterocystous cyanobacteria Nostoc. Biological nitrogen (N) fixation (BNF) plays a significant role in maintaining soil fertility in paddy field ecosystems.Rice variety influences BNF,but how different rice varieties regulate BNF and associated diazotroph communities has not been quantified.Airtight,field-based 15N2-labelling growth chamber experiments were used to assess the BNF capacity of different rice varieties.In addition,both the 16S rRNA and nifH genes were sequenced to assess the influence of different rice varieties on bacterial and diazotrophic communities in paddy soils.After subjecting a rice-soil system to 74 d of continuous airtight,field-based 15N2 labelling in pots in a growth chamber,the amounts of fixed N were 22.3 and 38.9 kg ha-1 in inbred japonica (W23) and hybrid indica (IIY) rice cultivars planted in the rice-soil systems,respectively,and only 1%-2.5% of the fixed N was allocated to the rice plants and weeds.A greater abundance of diazotrophs was found in the surface soil (0-1 cm) under IIY than under W23.Sequencing of the 16S rRNA gene showed significantly greater abundances of the cyanobacterial genera Nostoc,Anabaena,and Cylindrosperrnum under IIY than under W23.Sequencing of the nifHgene also showed a significantly greater abundance of Nostoc under IIY than under W23.These results indicate that the hybrid rice cultivar (IIY) promoted BNF to a greater extent than the inbred rice cultivar (W23) and that the increase in BNF might have been due to the enhanced heterocystous cyanobacteria Nostoc. |
Author | SUN, Xiaoli BEI, Qicheng WANG, Xiaojie CADISCH, Georg MA, Jing ZHU, Jianguo LIU, Gang LIN, Xingwu XIE, Zubin |
AuthorAffiliation | State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008 China;University of Chinese Academy of Sciences, Beijing 100049 China%State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008 China%Institute of Agricultural Sciences in the Tropics(Hans-Ruthenberg-Institute), University of Hohenheim, Stuttgart 70593 Germany |
AuthorAffiliation_xml | – name: State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008 China;University of Chinese Academy of Sciences, Beijing 100049 China%State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008 China%Institute of Agricultural Sciences in the Tropics(Hans-Ruthenberg-Institute), University of Hohenheim, Stuttgart 70593 Germany |
Author_xml | – sequence: 1 givenname: Jing surname: MA fullname: MA, Jing organization: State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008 (China) – sequence: 2 givenname: Qicheng surname: BEI fullname: BEI, Qicheng organization: State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008 (China) – sequence: 3 givenname: Xiaojie surname: WANG fullname: WANG, Xiaojie organization: State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008 (China) – sequence: 4 givenname: Gang surname: LIU fullname: LIU, Gang organization: State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008 (China) – sequence: 5 givenname: Georg surname: CADISCH fullname: CADISCH, Georg organization: Institute of Agricultural Sciences in the Tropics (Hans-Ruthenberg-Institute), University of Hohenheim, Stuttgart 70593 (Germany) – sequence: 6 givenname: Xingwu surname: LIN fullname: LIN, Xingwu organization: State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008 (China) – sequence: 7 givenname: Jianguo surname: ZHU fullname: ZHU, Jianguo organization: State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008 (China) – sequence: 8 givenname: Xiaoli surname: SUN fullname: SUN, Xiaoli organization: State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008 (China) – sequence: 9 givenname: Zubin surname: XIE fullname: XIE, Zubin email: zbxie@issas.ac.cn organization: State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008 (China) |
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Snippet | Biological nitrogen (N) fixation (BNF) plays a significant role in maintaining soil fertility in paddy field ecosystems. Rice variety influences BNF, but how... Biological nitrogen (N) fixation (BNF) plays a significant role in maintaining soil fertility in paddy field ecosystems.Rice variety influences BNF,but how... |
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SubjectTerms | 15N2 labelling 16S rRNA gene Abundance Airtightness Anabaena biological nitrogen fixation Communities Cultivars Cyanobacteria Cylindrospermum ecosystems Fixation Gene sequencing genes Growth chambers Hybrid systems hybrids Inbreeding Labeling NifH gene Nitrogen Nitrogen fixation nitrogen-fixing bacteria Nitrogenation Nostoc Oryza sativa indica Oryza sativa japonica paddies paddy soils ribosomal RNA Rice Rice fields rice variety rRNA 16S Soil fertility Soil surfaces Soils stable isotopes weeds |
Title | Paddy System with a Hybrid Rice Enhances Cyanobacteria Nostoc and Increases N2 Fixation |
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