Paddy System with a Hybrid Rice Enhances Cyanobacteria Nostoc and Increases N2 Fixation

Biological nitrogen (N) fixation (BNF) plays a significant role in maintaining soil fertility in paddy field ecosystems. Rice variety influences BNF, but how different rice varieties regulate BNF and associated diazotroph communities has not been quantified. Airtight, field-based 15N2-labelling grow...

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Published inPedosphere Vol. 29; no. 3; pp. 374 - 387
Main Authors MA, Jing, BEI, Qicheng, WANG, Xiaojie, LIU, Gang, CADISCH, Georg, LIN, Xingwu, ZHU, Jianguo, SUN, Xiaoli, XIE, Zubin
Format Journal Article
LanguageEnglish
Published Beijing Elsevier Ltd 01.06.2019
Elsevier Science Ltd
State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008 China
University of Chinese Academy of Sciences, Beijing 100049 China%State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008 China%Institute of Agricultural Sciences in the Tropics(Hans-Ruthenberg-Institute), University of Hohenheim, Stuttgart 70593 Germany
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Abstract Biological nitrogen (N) fixation (BNF) plays a significant role in maintaining soil fertility in paddy field ecosystems. Rice variety influences BNF, but how different rice varieties regulate BNF and associated diazotroph communities has not been quantified. Airtight, field-based 15N2-labelling growth chamber experiments were used to assess the BNF capacity of different rice varieties. In addition, both the 16S rRNA and nifH genes were sequenced to assess the influence of different rice varieties on bacterial and diazotrophic communities in paddy soils. After subjecting a rice-soil system to 74 d of continuous airtight, field-based 15N2 labelling in pots in a growth chamber, the amounts of fixed N were 22.3 and 38.9 kg ha–1 in inbred japonica (W23) and hybrid indica (IIY) rice cultivars planted in the rice-soil systems, respectively, and only 1%–2.5% of the fixed N was allocated to the rice plants and weeds. A greater abundance of diazotrophs was found in the surface soil (0–1 cm) under IIY than under W23. Sequencing of the 16S rRNA gene showed significantly greater abundances of the cyanobacterial genera Nostoc, Anabaena, and Cylindrospermum under IIY than under W23. Sequencing of the nifH gene also showed a significantly greater abundance of Nostoc under IIY than under W23. These results indicate that the hybrid rice cultivar (IIY) promoted BNF to a greater extent than the inbred rice cultivar (W23) and that the increase in BNF might have been due to the enhanced heterocystous cyanobacteria Nostoc.
AbstractList Biological nitrogen (N) fixation (BNF) plays a significant role in maintaining soil fertility in paddy field ecosystems. Rice variety influences BNF, but how different rice varieties regulate BNF and associated diazotroph communities has not been quantified. Airtight, field-based 15N2-labelling growth chamber experiments were used to assess the BNF capacity of different rice varieties. In addition, both the 16S rRNA and nifH genes were sequenced to assess the influence of different rice varieties on bacterial and diazotrophic communities in paddy soils. After subjecting a rice-soil system to 74 d of continuous airtight, field-based 15N2 labelling in pots in a growth chamber, the amounts of fixed N were 22.3 and 38.9 kg ha–1 in inbred japonica (W23) and hybrid indica (IIY) rice cultivars planted in the rice-soil systems, respectively, and only 1%–2.5% of the fixed N was allocated to the rice plants and weeds. A greater abundance of diazotrophs was found in the surface soil (0–1 cm) under IIY than under W23. Sequencing of the 16S rRNA gene showed significantly greater abundances of the cyanobacterial genera Nostoc, Anabaena, and Cylindrospermum under IIY than under W23. Sequencing of the nifH gene also showed a significantly greater abundance of Nostoc under IIY than under W23. These results indicate that the hybrid rice cultivar (IIY) promoted BNF to a greater extent than the inbred rice cultivar (W23) and that the increase in BNF might have been due to the enhanced heterocystous cyanobacteria Nostoc.
Biological nitrogen (N) fixation (BNF) plays a significant role in maintaining soil fertility in paddy field ecosystems.Rice variety influences BNF,but how different rice varieties regulate BNF and associated diazotroph communities has not been quantified.Airtight,field-based 15N2-labelling growth chamber experiments were used to assess the BNF capacity of different rice varieties.In addition,both the 16S rRNA and nifH genes were sequenced to assess the influence of different rice varieties on bacterial and diazotrophic communities in paddy soils.After subjecting a rice-soil system to 74 d of continuous airtight,field-based 15N2 labelling in pots in a growth chamber,the amounts of fixed N were 22.3 and 38.9 kg ha-1 in inbred japonica (W23) and hybrid indica (IIY) rice cultivars planted in the rice-soil systems,respectively,and only 1%-2.5% of the fixed N was allocated to the rice plants and weeds.A greater abundance of diazotrophs was found in the surface soil (0-1 cm) under IIY than under W23.Sequencing of the 16S rRNA gene showed significantly greater abundances of the cyanobacterial genera Nostoc,Anabaena,and Cylindrosperrnum under IIY than under W23.Sequencing of the nifHgene also showed a significantly greater abundance of Nostoc under IIY than under W23.These results indicate that the hybrid rice cultivar (IIY) promoted BNF to a greater extent than the inbred rice cultivar (W23) and that the increase in BNF might have been due to the enhanced heterocystous cyanobacteria Nostoc.
Author SUN, Xiaoli
BEI, Qicheng
WANG, Xiaojie
CADISCH, Georg
MA, Jing
ZHU, Jianguo
LIU, Gang
LIN, Xingwu
XIE, Zubin
AuthorAffiliation State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008 China;University of Chinese Academy of Sciences, Beijing 100049 China%State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008 China%Institute of Agricultural Sciences in the Tropics(Hans-Ruthenberg-Institute), University of Hohenheim, Stuttgart 70593 Germany
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Keywords rice variety
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16S rRNA gene
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Snippet Biological nitrogen (N) fixation (BNF) plays a significant role in maintaining soil fertility in paddy field ecosystems. Rice variety influences BNF, but how...
Biological nitrogen (N) fixation (BNF) plays a significant role in maintaining soil fertility in paddy field ecosystems.Rice variety influences BNF,but how...
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SubjectTerms 15N2 labelling
16S rRNA gene
Abundance
Airtightness
Anabaena
biological nitrogen fixation
Communities
Cultivars
Cyanobacteria
Cylindrospermum
ecosystems
Fixation
Gene sequencing
genes
Growth chambers
Hybrid systems
hybrids
Inbreeding
Labeling
NifH gene
Nitrogen
Nitrogen fixation
nitrogen-fixing bacteria
Nitrogenation
Nostoc
Oryza sativa indica
Oryza sativa japonica
paddies
paddy soils
ribosomal RNA
Rice
Rice fields
rice variety
rRNA 16S
Soil fertility
Soil surfaces
Soils
stable isotopes
weeds
Title Paddy System with a Hybrid Rice Enhances Cyanobacteria Nostoc and Increases N2 Fixation
URI https://dx.doi.org/10.1016/S1002-0160(19)60809-X
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