Multiple Pleistocene refugia in the Brazilian cerrado: evidence from phylogeography and climatic nichemodelling of two Qualea species (Vochysiaceae)
Abstract The cerrado is a large savanna in central Brazil, which extends north to the Amazon Forest and the caatinga (xeric vegetation) and includes disjunct areas in both of those biomes. Cerrado plant diversification is understudied, especially in disjunct areas and in peripheral areas bordering o...
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Published in | Botanical journal of the Linnean Society Vol. 185; no. 3; pp. 307 - 320 |
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Main Authors | , , , |
Format | Journal Article |
Language | English |
Published |
UK
Oxford University Press
01.11.2017
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Subjects | |
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Abstract | Abstract
The cerrado is a large savanna in central Brazil, which extends north to the Amazon Forest and the caatinga (xeric vegetation) and includes disjunct areas in both of those biomes. Cerrado plant diversification is understudied, especially in disjunct areas and in peripheral areas bordering other biomes. Here we investigated the effects of Quaternary climatic fluctuations on the distribution, genetic diversity and divergence of two closely related species, Qualea multiflora and Qualea parviflora. Both species are widely distributed in the cerrado, including disjunct and peripheral areas. We sequenced plastid DNA from individuals of both species across their distributions, including core, disjunct and peripheral areas of the cerrado. Both species showed similar responses to Quaternary climatic fluctuations with range retractions during the Last Glacial Maximum (LGM). Phylogeographic analyses and ecological niche modelling revealed a large historical glacial refugium across central Brazil and multiple refugia in peripheral areas of the south-west, north-west (bordering the Amazon) and north-east (in transition with the caatinga). The genetic diversity, diversification and geographical structuring of Q. multiflora and Q. parviflora were mainly shaped by Pleistocene climatic fluctuations. The presence of several refugia at the Amazon Forest boundary suggests that savanna vegetation could have covered parts of the south-western Amazon during the LGM. |
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AbstractList | The cerrado is a large savanna in central Brazil, which extends north to the Amazon Forest and the caatinga (xeric vegetation) and includes disjunct areas in both of those biomes. Cerrado plant diversification is understudied, especially in disjunct areas and in peripheral areas bordering other biomes. Here we investigated the effects of Quaternary climatic fluctuations on the distribution, genetic diversity and divergence of two closely related species, Qualea multiflora and Qualea parviflora. Both species are widely distributed in the cerrado, including disjunct and peripheral areas. We sequenced plastid DNA from individuals of both species across their distributions, including core, disjunct and peripheral areas of the cerrado. Both species showed similar responses to Quaternary climatic fluctuations with range retractions during the Last Glacial Maximum (LGM). Phylogeographic analyses and ecological niche modelling revealed a large historical glacial refugium across central Brazil and multiple refugia in peripheral areas of the south-west, north-west (bordering the Amazon) and north-east (in transition with the caatinga). The genetic diversity, diversification and geographical structuring of Q. multiflora and Q. parviflora were mainly shaped by Pleistocene climatic fluctuations. The presence of several refugia at the Amazon Forest boundary suggests that savanna vegetation could have covered parts of the south-western Amazon during the LGM. Abstract The cerrado is a large savanna in central Brazil, which extends north to the Amazon Forest and the caatinga (xeric vegetation) and includes disjunct areas in both of those biomes. Cerrado plant diversification is understudied, especially in disjunct areas and in peripheral areas bordering other biomes. Here we investigated the effects of Quaternary climatic fluctuations on the distribution, genetic diversity and divergence of two closely related species, Qualea multiflora and Qualea parviflora. Both species are widely distributed in the cerrado, including disjunct and peripheral areas. We sequenced plastid DNA from individuals of both species across their distributions, including core, disjunct and peripheral areas of the cerrado. Both species showed similar responses to Quaternary climatic fluctuations with range retractions during the Last Glacial Maximum (LGM). Phylogeographic analyses and ecological niche modelling revealed a large historical glacial refugium across central Brazil and multiple refugia in peripheral areas of the south-west, north-west (bordering the Amazon) and north-east (in transition with the caatinga). The genetic diversity, diversification and geographical structuring of Q. multiflora and Q. parviflora were mainly shaped by Pleistocene climatic fluctuations. The presence of several refugia at the Amazon Forest boundary suggests that savanna vegetation could have covered parts of the south-western Amazon during the LGM. |
Author | Buzatti, Renata Santiago de Oliveira Lovato, Maria Bernadete Lemos-Filho, José Pires Bueno, Marcelo Leandro |
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Cites_doi | 10.1016/j.ecolmodel.2005.03.026 10.1111/boj.12394 10.1371/journal.pcbi.1003537 10.1111/ecog.01860 10.1017/S0960428603000064 10.1126/science.1194585 10.1023/A:1018368809116 10.1046/j.1365-294X.2003.01701.x 10.1038/hdy.2016.17 10.1126/science.165.3889.131 10.1111/j.1365-2664.2006.01214.x 10.2307/2666186 10.1016/j.palaeo.2006.01.017 10.1590/0102-33062014abb3064 10.1111/boj.12241 10.1080/10635150802429642 10.1146/annurev.ecolsys.38.091206.095622 10.1016/j.quascirev.2011.03.009 10.1080/10635150390235520 10.1111/j.1365-294X.2010.04530.x 10.1073/pnas.0903410106 10.1093/aob/mcm221 10.1073/pnas.0811421106 10.1111/j.1600-0587.2012.07348.x 10.1109/GCE.2010.5676129 10.1093/oxfordjournals.molbev.a026036 10.1016/j.ympev.2015.10.001 10.1111/j.0906-7590.2008.5203.x 10.1093/genetics/147.2.915 10.1371/journal.pone.0082198 10.1086/665973 10.1038/nature13687 10.1126/science.1120808 10.1016/j.tree.2011.05.011 10.4322/natcon.2012.024 10.1175/BAMS-D-11-00094.1 10.1111/mec.12780 10.1111/mec.12071 10.1046/j.1365-294X.2002.01650.x 10.1006/anbo.1997.0469 10.1016/j.tree.2006.10.004 10.1111/j.1365-2699.2012.02715.x 10.1016/S0277-3791(99)00059-1 10.1093/genetics/123.3.585 10.1111/ecog.03049 10.1111/gcb.13312 10.1186/s12862-014-0213-0 10.1016/S0031-0182(01)00349-2 10.1093/molbev/mst197 10.1093/aob/mcp157 10.1111/mec.12164 10.1175/2011JCLI4083.1 10.1038/nmeth.2109 10.1002/joc.1276 10.2307/3558389 10.1093/aob/mcw096 10.1186/1471-2105-9-539 |
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References | ( key 20171130143458_CIT0008) 2002; 177 ( key 20171130143458_CIT0004) 1994 ( key 20171130143458_CIT0032) 1969; 165 ( key 20171130143458_CIT0036) 1999; 86 ( key 20171130143458_CIT0052) 2003; 60 ( key 20171130143458_CIT0007) 1999; 16 ( key 20171130143458_CIT0018) 2009; 104 ( key 20171130143458_CIT0041) 2010; 19 ( key 20171130143458_CIT0014) 2000; 19 ( key 20171130143458_CIT0035) 2010; 330 ( key 20171130143458_CIT0010) 2014; 23 ( key 20171130143458_CIT0064) 2008; 57 ( key 20171130143458_CIT0030) 2011; 24 ( key 20171130143458_CIT0051) 2007; 100 ( key 20171130143458_CIT0049) 2014 ( key 20171130143458_CIT0022) 2014; 28 ( key 20171130143458_CIT0043) 1998 ( key 20171130143458_CIT0026) 2002; 11 ( key 20171130143458_CIT0031) 2003; 52 ( key 20171130143458_CIT0066) 2013; 30 ( key 20171130143458_CIT0056) 1992; 9 ( key 20171130143458_CIT0017) 2014; 14 ( key 20171130143458_CIT0048) 2008; 31 ( key 20171130143458_CIT0028) 2005; 1 ( key 20171130143458_CIT0047) 2006; 190 ( key 20171130143458_CIT0058) 2009 ( key 20171130143458_CIT0033) 1999; 8 ( key 20171130143458_CIT0070) 2011; 30 ( key 20171130143458_CIT0060) 2009; 106 ( key 20171130143458_CIT0023) 2012; 9 key 20171130143458_CIT0040 ( key 20171130143458_CIT0053) 1997; 80 ( key 20171130143458_CIT0059) 1997; 6 ( key 20171130143458_CIT0024) 2013; 36 ( key 20171130143458_CIT0012) 2017; 40 ( key 20171130143458_CIT0063) 2017; 119 ( key 20171130143458_CIT0068) 2013; 22 ( key 20171130143458_CIT0029) 1997; 147 ( key 20171130143458_CIT0069) 2015; 177 ( key 20171130143458_CIT0025) 1987; 19 ( key 20171130143458_CIT0039) 1967; 27 ( key 20171130143458_CIT0011) 2014; 10 ( key 20171130143458_CIT0050) 2013 ( key 20171130143458_CIT0045) 2016; 116 ( key 20171130143458_CIT0003) 2009; 106 ( key 20171130143458_CIT0020) 2012; 21 ( key 20171130143458_CIT0046) 2017; 40 ( key 20171130143458_CIT0034) 2005; 25 ( key 20171130143458_CIT0021) 2008; 9 ( key 20171130143458_CIT0009) 2016; 95 ( key 20171130143458_CIT0015) 2003; 12 ( key 20171130143458_CIT0037) 2008; 39 ( key 20171130143458_CIT0054) 2016; 181 ( key 20171130143458_CIT0001) 2006; 43 ( key 20171130143458_CIT0071) 2012; 39 ( key 20171130143458_CIT0057) 2011; 26 ( key 20171130143458_CIT0062) 2014; 515 ESRI ( key 20171130143458_CIT0027) 2011 ( key 20171130143458_CIT0002) 2006; 239 ( key 20171130143458_CIT0038) 2007; 22 ( key 20171130143458_CIT0067) 2012; 93 ( key 20171130143458_CIT0019) 2013; 111 ( key 20171130143458_CIT0016) 2012; 10 ( key 20171130143458_CIT0006) 2001; 88 ( key 20171130143458_CIT0065) 1989; 123 ( key 20171130143458_CIT0005) 2000 ( key 20171130143458_CIT0055) 2016; 22 ( key 20171130143458_CIT0013) 2006; 6 ( key 20171130143458_CIT0061) 2012; 173 CAPE Last Interglacial Project members ( key 20171130143458_CIT0044) 2006; 311 ( key 20171130143458_CIT0042) 2013; 8 |
References_xml | – volume: 190 start-page: 231 year: 2006 ident: key 20171130143458_CIT0047 article-title: Maximum entropy modeling of species geographic distributions publication-title: Ecological Modelling doi: 10.1016/j.ecolmodel.2005.03.026 – volume: 181 start-page: 21 year: 2016 ident: key 20171130143458_CIT0054 article-title: Species specific phylogeographical patterns and Pleistocene east–west divergence in Annona (Annonaceae) in the Brazilian cerrado publication-title: Botanical Journal of the Linnean Society doi: 10.1111/boj.12394 – volume-title: ArcGIS Desktop: Release 10 year: 2011 ident: key 20171130143458_CIT0027 – volume: 10 start-page: e1003537 year: 2014 ident: key 20171130143458_CIT0011 article-title: BEAST 2: a software platform for Bayesian evolutionary analysis publication-title: PLoS Computational Biology doi: 10.1371/journal.pcbi.1003537 – volume-title: Molecular markers, natural history and evolution year: 1994 ident: key 20171130143458_CIT0004 – volume: 40 start-page: 403 year: 2017 ident: key 20171130143458_CIT0012 article-title: Effects of Quaternary climatic fluctuations on the distribution of Neotropical savanna tree species publication-title: Ecography doi: 10.1111/ecog.01860 – year: 2014 ident: key 20171130143458_CIT0049 – volume: 60 start-page: 57 year: 2003 ident: key 20171130143458_CIT0052 article-title: Analysis of the floristic composition of the Brazilian cerrado vegetation III: comparison of the woody vegetation of 376 areas publication-title: Edinburgh Journal of Botany doi: 10.1017/S0960428603000064 – volume: 6 start-page: 1 year: 2006 ident: key 20171130143458_CIT0013 article-title: The rise and fall of the refugial hypothesis of Amazonian speciation: a paleoecological perspective publication-title: Biota Neotropica – volume: 330 start-page: 927 year: 2010 ident: key 20171130143458_CIT0035 article-title: Amazonia through time: Andean uplift, climate change, landscape evolution, and biodiversity publication-title: Science doi: 10.1126/science.1194585 – volume: 6 start-page: 435 year: 1997 ident: key 20171130143458_CIT0059 article-title: Endemic bird species and conservation in the cerrado region, South America publication-title: Biodiversity and Conservation doi: 10.1023/A:1018368809116 – volume: 12 start-page: 105 year: 2003 ident: key 20171130143458_CIT0015 article-title: Evidences for multiple maternal lineages of Caryocar brasiliense populations in the Brazilian cerrado based on the analysis of chloroplast DNA sequences and microsatellite haplotype variation publication-title: Molecular Ecology doi: 10.1046/j.1365-294X.2003.01701.x – volume: 116 start-page: 550 year: 2016 ident: key 20171130143458_CIT0045 article-title: Model-based analysis supports interglacial refugia over long-dispersal events in the diversification of two South American cactus species publication-title: Heredity doi: 10.1038/hdy.2016.17 – volume-title: Vochysiaceae na Serra do Cipó, MG, Brazil year: 2009 ident: key 20171130143458_CIT0058 – volume: 165 start-page: 131 year: 1969 ident: key 20171130143458_CIT0032 article-title: Speciation in Amazonian forest birds publication-title: Science doi: 10.1126/science.165.3889.131 – volume: 43 start-page: 1223 year: 2006 ident: key 20171130143458_CIT0001 article-title: Assessing the accuracy of species distribution models: prevalence, kappa and the true skill statistic (TSS) publication-title: Journal of Applied Ecology doi: 10.1111/j.1365-2664.2006.01214.x – volume: 86 start-page: 590 year: 1999 ident: key 20171130143458_CIT0036 article-title: The origin of grass-dominated ecosystems publication-title: Annals of the Missouri Botanical Garden doi: 10.2307/2666186 – volume: 239 start-page: 510 year: 2006 ident: key 20171130143458_CIT0002 article-title: Paleo-environmental change in Amazonian and African rainforest during the LGM publication-title: Palaeogeography, Palaeoclimatology, Palaeoecology doi: 10.1016/j.palaeo.2006.01.017 – volume: 28 start-page: 309 year: 2014 ident: key 20171130143458_CIT0022 article-title: Pre-dispersal seed predation and abortion in species of Callisthene and Qualea (Vochysiaceae) in a Neotropical savanna publication-title: Acta Botanica Brasilica doi: 10.1590/0102-33062014abb3064 – volume: 177 start-page: 189 year: 2015 ident: key 20171130143458_CIT0069 article-title: Holocene southward expansion in seasonally dry tropical forests in South America: phylogeography of Ficus bonijesulapensis (Moraceae) publication-title: Botanical Journal of the Linnean Society doi: 10.1111/boj.12241 – volume: 57 start-page: 758 year: 2008 ident: key 20171130143458_CIT0064 article-title: A rapid bootstrap algorithm for the RAxML Web servers publication-title: Systematic Biology doi: 10.1080/10635150802429642 – volume: 39 start-page: 321 year: 2008 ident: key 20171130143458_CIT0037 article-title: Adaptation to marginal habitats publication-title: Annual Review of Ecology, Evolution, and Systematics doi: 10.1146/annurev.ecolsys.38.091206.095622 – volume: 30 start-page: 1630 year: 2011 ident: key 20171130143458_CIT0070 article-title: The diversification of eastern South American open vegetation biomes: historical biogeography and perspectives publication-title: Quaternary Science Reviews doi: 10.1016/j.quascirev.2011.03.009 – volume: 111 start-page: 105 year: 2013 ident: key 20171130143458_CIT0019 article-title: Demographic history and the low genetic diversity in Dipteryx alata (Fabaceae) from Brazilian Neotropical savannas publication-title: Heredity – volume: 52 start-page: 696 year: 2003 ident: key 20171130143458_CIT0031 article-title: A simple, fast and accurate method to estimate large phylogenies by maximum-likelihood publication-title: Systematic Biology doi: 10.1080/10635150390235520 – volume: 19 start-page: 985 year: 2010 ident: key 20171130143458_CIT0041 article-title: Phylogeography of Plathymenia reticulata (Leguminosae) reveals patterns of recent range expansion towards northeastern Brazil and southern cerrados in eastern tropical South America publication-title: Molecular Ecology doi: 10.1111/j.1365-294X.2010.04530.x – volume: 19 start-page: 11 year: 1987 ident: key 20171130143458_CIT0025 article-title: A rapid DNA isolation procedure for small quantities of fresh leaf tissue publication-title: Phytochemical Bulletin, Botanical Society of America – volume: 106 start-page: 20359 year: 2009 ident: key 20171130143458_CIT0060 article-title: Recent assembly of the cerrado, a Neotropical plant diversity hotspot, by in situ evolution of adaptations to fire publication-title: Proceedings of the National Academy of Sciences of the United States of America doi: 10.1073/pnas.0903410106 – volume: 100 start-page: 1219 year: 2007 ident: key 20171130143458_CIT0051 article-title: Phylogeography of the tree Hymenaea stigonocarpa (Fabaceae: Caesalpinioideae) and the influence of quaternary climate changes in the Brazilian cerrado publication-title: Annals of Botany doi: 10.1093/aob/mcm221 – volume: 106 start-page: 9749 year: 2009 ident: key 20171130143458_CIT0003 article-title: Tracing the impact of the Andean uplift on Neotropical plant evolution publication-title: Proceedings of the National Academy of Sciences of the United States of America doi: 10.1073/pnas.0811421106 – volume: 36 start-page: 27 year: 2013 ident: key 20171130143458_CIT0024 article-title: Collinearity: a review of methods to deal with it and a simulation study evaluating their performance publication-title: Ecography doi: 10.1111/j.1600-0587.2012.07348.x – ident: key 20171130143458_CIT0040 doi: 10.1109/GCE.2010.5676129 – volume: 1 start-page: 47 year: 2005 ident: key 20171130143458_CIT0028 article-title: Arlequin ver. 3.0: an integrated software package for population genetics data analysis publication-title: Evolution Bioinformatics Online – volume: 8 start-page: 521 year: 1999 ident: key 20171130143458_CIT0033 article-title: Four primer pairs for the amplification of chloroplast intergenic regions with intraspecific variation publication-title: Molecular Ecology – volume: 16 start-page: 37 year: 1999 ident: key 20171130143458_CIT0007 article-title: Median-joining networks for inferring intraspecific phylogenies publication-title: Molecular Biology and Evolution doi: 10.1093/oxfordjournals.molbev.a026036 – volume: 95 start-page: 116 year: 2016 ident: key 20171130143458_CIT0009 article-title: Divergence times, historical biogeography, and shifts in speciation rates of Myrtales publication-title: Molecular Phylogenetics and Evolution doi: 10.1016/j.ympev.2015.10.001 – volume: 31 start-page: 161 year: 2008 ident: key 20171130143458_CIT0048 article-title: Modeling of species distributions with Maxent: new extensions and a comprehensive evaluation publication-title: Ecography doi: 10.1111/j.0906-7590.2008.5203.x – volume: 147 start-page: 915 year: 1997 ident: key 20171130143458_CIT0029 article-title: Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection publication-title: Genetics doi: 10.1093/genetics/147.2.915 – volume: 8 start-page: e82198 year: 2013 ident: key 20171130143458_CIT0042 article-title: Concordance between phylogeographical and biogeographical patterns in the Brazilian cerrado: diversification of the endemic tree Dalbergia miscolobium (Fabaceae) publication-title: PLoS One doi: 10.1371/journal.pone.0082198 – volume: 173 start-page: 711 year: 2012 ident: key 20171130143458_CIT0061 article-title: Evidence for adaptation to fire regimes in the tropical savannas of the Brazilian cerrado publication-title: International Journal of Plant Sciences doi: 10.1086/665973 – volume: 515 start-page: 406 year: 2014 ident: key 20171130143458_CIT0062 article-title: The drivers of tropical speciation publication-title: Nature doi: 10.1038/nature13687 – volume: 311 start-page: 1751 year: 2006 ident: key 20171130143458_CIT0044 article-title: Simulating arctic climate warmth and icefield retreat in the last interglaciation publication-title: Science doi: 10.1126/science.1120808 – year: 2013 ident: key 20171130143458_CIT0050 – volume: 26 start-page: 508 year: 2011 ident: key 20171130143458_CIT0057 article-title: Neotropical biodiversity: timing and potential drivers publication-title: Trends in Ecology & Evolution doi: 10.1016/j.tree.2011.05.011 – volume: 10 start-page: 169 year: 2012 ident: key 20171130143458_CIT0016 article-title: Recovering the demographical history of a Brazilian cerrado tree species Caryocar brasiliense: coupling ecological niche modeling and coalescent analyses publication-title: Natureza e Conservação doi: 10.4322/natcon.2012.024 – volume: 93 start-page: 485 year: 2012 ident: key 20171130143458_CIT0067 article-title: An overview of CMIP5 and the experiment design publication-title: Bulletin of the American Meteorological Society doi: 10.1175/BAMS-D-11-00094.1 – volume: 9 start-page: 552 year: 1992 ident: key 20171130143458_CIT0056 article-title: Population growth makes waves in the distribution of pairwise genetic differences publication-title: Molecular Biology and Evolution – volume: 23 start-page: 3044 year: 2014 ident: key 20171130143458_CIT0010 article-title: Interglacial microrefugia and diversification of a cactus species complex: phylogeography and palaeodistributional reconstructions for Pilosocereus aurisetus and allies publication-title: Molecular Ecology doi: 10.1111/mec.12780 – volume: 27 start-page: 209 year: 1967 ident: key 20171130143458_CIT0039 article-title: The detection of disease clustering and a generalized regression approach publication-title: Cancer Research – volume: 21 start-page: 5845 year: 2012 ident: key 20171130143458_CIT0020 article-title: A coupled phylogeographical and species distribution modelling approach recovers the demographical history of a Neotropical seasonally dry forest tree species publication-title: Molecular Ecology doi: 10.1111/mec.12071 – volume: 11 start-page: 2571 year: 2002 ident: key 20171130143458_CIT0026 article-title: A simulated annealing approach to define the genetic structure of populations publication-title: Molecular Ecology doi: 10.1046/j.1365-294X.2002.01650.x – volume: 80 start-page: 223 year: 1997 ident: key 20171130143458_CIT0053 article-title: The Brazilian cerrado vegetation and threats to its biodiversity publication-title: Annals of Botany doi: 10.1006/anbo.1997.0469 – volume: 22 start-page: 87 year: 2007 ident: key 20171130143458_CIT0038 article-title: Model use in phylogenetics: nine key questions publication-title: Trends in Ecology & Evolution doi: 10.1016/j.tree.2006.10.004 – volume: 39 start-page: 1695 year: 2012 ident: key 20171130143458_CIT0071 article-title: Climatic stability in the Brazilian cerrado: implications for biogeographical connections of South American savannas, species richness and conservation in a biodiversity hotspot publication-title: Journal of Biogeography doi: 10.1111/j.1365-2699.2012.02715.x – volume: 19 start-page: 141 year: 2000 ident: key 20171130143458_CIT0014 article-title: Amazonian and Neotropical plant communities on glacial time-scales: the failure of the aridity and refuge hypotheses publication-title: Quaternary Science Reviews doi: 10.1016/S0277-3791(99)00059-1 – volume: 123 start-page: 585 year: 1989 ident: key 20171130143458_CIT0065 article-title: Statistical method for testing the neutral mutation hypothesis by DNA polymorphism publication-title: Genetics doi: 10.1093/genetics/123.3.585 – volume: 40 start-page: 887 year: 2017 ident: key 20171130143458_CIT0046 article-title: Opening the black box: an open-source release of Maxent publication-title: Ecography doi: 10.1111/ecog.03049 – volume: 22 start-page: 3789 year: 2016 ident: key 20171130143458_CIT0055 article-title: Climatic drivers of leaf traits and genetic divergence in the tree Annona crassiflora: a broad spatial survey in the Brazilian savannas publication-title: Global Change Biology doi: 10.1111/gcb.13312 – volume-title: Phylogeography: the history and formation of species year: 2000 ident: key 20171130143458_CIT0005 – volume: 14 start-page: 213 year: 2014 ident: key 20171130143458_CIT0017 article-title: Recovering species demographic history from multi-model inference: the case of a Neotropical savanna tree species publication-title: BMC Evolutionary Biology doi: 10.1186/s12862-014-0213-0 – volume: 177 start-page: 19 year: 2002 ident: key 20171130143458_CIT0008 article-title: South and southeast Brazilian grasslands during late Quaternary times: a synthesis publication-title: Palaeogeography, Palaeoclimatology, Palaeoecology doi: 10.1016/S0031-0182(01)00349-2 – start-page: 381 volume-title: Reproductive biology year: 1998 ident: key 20171130143458_CIT0043 article-title: Reproductive biology, evolution and taxonomy of Vochysiaceae in central Brazil – volume: 30 start-page: 2725 year: 2013 ident: key 20171130143458_CIT0066 article-title: MEGA6: Molecular Evolutionary Genetics Analysis version 6.0 publication-title: Molecular Biology and Evolution doi: 10.1093/molbev/mst197 – volume: 104 start-page: 655 year: 2009 ident: key 20171130143458_CIT0018 article-title: Phylogeography and disjunct distribution in Lychnophora ericoides (Asteraceae), an endangered cerrado shrub species publication-title: Annals of Botany doi: 10.1093/aob/mcp157 – volume: 22 start-page: 1193 year: 2013 ident: key 20171130143458_CIT0068 article-title: Phylogeographical patterns shed light on evolutionary process in South America publication-title: Molecular Ecology doi: 10.1111/mec.12164 – volume: 24 start-page: 4973 year: 2011 ident: key 20171130143458_CIT0030 article-title: The community climate system model version 4 publication-title: Journal of Climate doi: 10.1175/2011JCLI4083.1 – volume: 9 start-page: 772 year: 2012 ident: key 20171130143458_CIT0023 article-title: jModelTest 2: more models, new heuristics and parallel computing publication-title: Nature Methods doi: 10.1038/nmeth.2109 – volume: 25 start-page: 1965 year: 2005 ident: key 20171130143458_CIT0034 article-title: Very high resolution interpolated climate surfaces for global land areas publication-title: International Journal of Climatology doi: 10.1002/joc.1276 – volume: 88 start-page: 2275 year: 2001 ident: key 20171130143458_CIT0006 article-title: Molecular phylogeny of the Magnoliaceae: the biogeography of tropical and temperate disjunctions publication-title: American Journal of Botany doi: 10.2307/3558389 – volume: 119 start-page: 239 year: 2017 ident: key 20171130143458_CIT0063 article-title: A large historical refugium explains spatial patterns of genetic diversity in a Neotropical savanna tree species publication-title: Annals of Botany doi: 10.1093/aob/mcw096 – volume: 9 start-page: 539 year: 2008 ident: key 20171130143458_CIT0021 article-title: Enhanced Bayesian modelling in BAPS software for learning genetic structures of populations publication-title: BMC Bioinformatics doi: 10.1186/1471-2105-9-539 |
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The cerrado is a large savanna in central Brazil, which extends north to the Amazon Forest and the caatinga (xeric vegetation) and includes disjunct... The cerrado is a large savanna in central Brazil, which extends north to the Amazon Forest and the caatinga (xeric vegetation) and includes disjunct areas in... |
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SubjectTerms | Biodiversity Deoxyribonucleic acid Divergence DNA Ecological monitoring Ecological niches Ecosystems Fluctuations Forests Genetic diversity Glacial periods Niches Nucleotide sequence Pleistocene Quaternary Refugia Savannahs Species Vegetation |
Title | Multiple Pleistocene refugia in the Brazilian cerrado: evidence from phylogeography and climatic nichemodelling of two Qualea species (Vochysiaceae) |
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