Genetic diversity of Bartonella rpoB haplotypes in domestic cats from Chile
The study aimed to determine the inter and intra-host Bartonella spp. genetic diversity in cats from Chile. ‘Seventy-nine cats’ blood DNA samples qPCR Bartonella spp. positive were subjected to T-A cloning of Bartonella spp. rpoB partial gene (825 bp), and sequencing by Sanger method. The sequences...
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| Published in | Comparative immunology, microbiology and infectious diseases Vol. 107; p. 102150 |
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| Main Authors | , , , , , , , |
| Format | Journal Article |
| Language | English |
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Elsevier Ltd
01.04.2024
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| Abstract | The study aimed to determine the inter and intra-host Bartonella spp. genetic diversity in cats from Chile. ‘Seventy-nine cats’ blood DNA samples qPCR Bartonella spp. positive were subjected to T-A cloning of Bartonella spp. rpoB partial gene (825 bp), and sequencing by Sanger method. The sequences were submitted to phylogenetic and polymorphism analysis. Thirty-six (45.6%) samples were successfully cloned, generating 118 clones of which 109 showed 99.6%–100% identity with Bartonella henselae whereas 9 showed 99.8–100% identity with Bartonella koehlerae. Haplotype analysis yielded 29 different rpoB-B. henselae haplotypes, one (hap#2) overrepresented in 31 out of 33 cats, and 4 rpoB-B. koehlerae haplotypes, with hap#2 represented in all 3 B. koehlerae infected cats. More than one rpoB -B. henselae and B. koehlerae haplotypes were identified in individual cats, reporting by first time coinfection by different B. henselae/B. koehlerae rpoB variants in cats from Chile.
•Twenty-nine Bartonella henselae rpoB haplotypes identified in Chilean cats.•Four Bartonella koehlerae rpoB haplotypes identified in Chilean cats.•Considerable genetic variability of B. henselae and B. koehlerae rpoB in cats.•Intra-host diversity with more than one B. henselae and B. koehlerae rpoB haplotype per animal. |
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| AbstractList | The study aimed to determine the inter and intra-host Bartonella spp. genetic diversity in cats from Chile. ‘Seventy-nine cats’ blood DNA samples qPCR Bartonella spp. positive were subjected to T-A cloning of Bartonella spp. rpoB partial gene (825 bp), and sequencing by Sanger method. The sequences were submitted to phylogenetic and polymorphism analysis. Thirty-six (45.6%) samples were successfully cloned, generating 118 clones of which 109 showed 99.6%–100% identity with Bartonella henselae whereas 9 showed 99.8–100% identity with Bartonella koehlerae. Haplotype analysis yielded 29 different rpoB-B. henselae haplotypes, one (hap#2) overrepresented in 31 out of 33 cats, and 4 rpoB-B. koehlerae haplotypes, with hap#2 represented in all 3 B. koehlerae infected cats. More than one rpoB -B. henselae and B. koehlerae haplotypes were identified in individual cats, reporting by first time coinfection by different B. henselae/B. koehlerae rpoB variants in cats from Chile.
•Twenty-nine Bartonella henselae rpoB haplotypes identified in Chilean cats.•Four Bartonella koehlerae rpoB haplotypes identified in Chilean cats.•Considerable genetic variability of B. henselae and B. koehlerae rpoB in cats.•Intra-host diversity with more than one B. henselae and B. koehlerae rpoB haplotype per animal. The study aimed to determine the inter and intra-host Bartonella spp. genetic diversity in cats from Chile. 'Seventy-nine cats' blood DNA samples qPCR Bartonella spp. positive were subjected to T-A cloning of Bartonella spp. rpoB partial gene (825 bp), and sequencing by Sanger method. The sequences were submitted to phylogenetic and polymorphism analysis. Thirty-six (45.6%) samples were successfully cloned, generating 118 clones of which 109 showed 99.6%-100% identity with Bartonella henselae whereas 9 showed 99.8-100% identity with Bartonella koehlerae. Haplotype analysis yielded 29 different rpoB-B. henselae haplotypes, one (hap#2) overrepresented in 31 out of 33 cats, and 4 rpoB-B. koehlerae haplotypes, with hap#2 represented in all 3 B. koehlerae infected cats. More than one rpoB -B. henselae and B. koehlerae haplotypes were identified in individual cats, reporting by first time coinfection by different B. henselae/B. koehlerae rpoB variants in cats from Chile. |
| ArticleNumber | 102150 |
| Author | Müller, Ananda André, Marcos Rogério Mella, Armin Sepúlveda-García, Paulina Monti, Gustavo Furquim, Maria Eduarda Chiaradia Canales, Nivia Jara, Ronald |
| Author_xml | – sequence: 1 givenname: Paulina surname: Sepúlveda-García fullname: Sepúlveda-García, Paulina organization: Instituto de Medicina Preventiva Veterinaria, Facultad de Ciencias Veterinarias, Universidad Austral de Chile, Chile – sequence: 2 givenname: Ronald surname: Jara fullname: Jara, Ronald organization: Instituto de Bioquímica y Microbiología, Facultad de Ciencias, Universidad Austral de Chile, Chile – sequence: 3 givenname: Armin surname: Mella fullname: Mella, Armin organization: Instituto de Bioquímica y Microbiología, Facultad de Ciencias, Universidad Austral de Chile, Chile – sequence: 4 givenname: Gustavo surname: Monti fullname: Monti, Gustavo organization: Quantitative Veterinary Epidemiology group, Wageningen University and Research, Wageningen, the Netherlands – sequence: 5 givenname: Nivia surname: Canales fullname: Canales, Nivia organization: Instituto de Bioquímica y Microbiología, Facultad de Ciencias, Universidad Austral de Chile, Chile – sequence: 6 givenname: Maria Eduarda Chiaradia surname: Furquim fullname: Furquim, Maria Eduarda Chiaradia organization: Laboratório de Bioagentes Transmitidos por Vetores, Departamento de Patologia, Reprodução e Saúde Única,Faculdade de Ciências Agrárias e Veterinárias, Universidade Estadual “Júlio de Mesquita Filho”(FCAV/UNESP), Jaboticabal, Brazil – sequence: 7 givenname: Marcos Rogério surname: André fullname: André, Marcos Rogério organization: Laboratório de Bioagentes Transmitidos por Vetores, Departamento de Patologia, Reprodução e Saúde Única,Faculdade de Ciências Agrárias e Veterinárias, Universidade Estadual “Júlio de Mesquita Filho”(FCAV/UNESP), Jaboticabal, Brazil – sequence: 8 givenname: Ananda orcidid: 0000-0003-2100-6594 surname: Müller fullname: Müller, Ananda email: AMuller@rossvet.edu.kn organization: Ross University School of Veterinary Medicine, Basseterre, Saint Kitts and Nevis |
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| Cites_doi | 10.1099/ijsem.0.004332 10.1128/jcm.35.7.1813-1818.1997 10.1099/mic.0.2007/006379-0 10.1089/vbz.2016.1956 10.1017/S003118201600247X 10.1016/j.actatropica.2021.106037 10.1038/nmeth.4285 10.1007/s00248-017-0936-8 10.1016/S0022-2836(05)80360-2 10.1093/molbev/msu300 10.1146/annurev.micro.58.030603.123700 10.1214/aos/1176344136 10.1016/j.onehlt.2023.100545 10.1111/2041-210X.12410 10.1046/j.1469-0691.2002.00434.x 10.1128/AEM.01370-15 10.1111/j.1476-4431.2009.00496.x 10.1128/JCM.39.2.430-437.2001 10.1093/nar/gkh045 10.1128/JCM.42.8.3462-3468.2004 10.1016/j.eimc.2011.03.012 10.1109/IPDPS.2002.1016585 10.3201/eid1203.050931 10.1128/jcm.35.8.2120-2123.1997 10.1093/molbev/msy096 10.1046/j.1365-2958.1997.6382009.x 10.1101/gr.87702 10.1016/j.actatropica.2022.106742 10.1093/bioinformatics/btp187 10.1128/JCM.37.5.1536-1547.1999 10.1016/S1369-5274(03)00036-5 |
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| References | Huwyler, Heiniger, Chomel, Kim, Kasten, Koehler (bib12) 2017; 74 Gutiérrez, Nachum-Biala, Harrus (bib30) 2015; 81 Bou, Fernández-Olmos, García, Sáez-Nieto, Valdezate (bib13) 2011; 29 Li, Wu, Luo (bib27) 1985; 2 Altschul (bib19) 1990; 215 Cheslock, Embers (bib3) 2019; 4 Kumar, Stecher, Li, Knyaz, Tamura (bib28) 2018; 35 Kordick, Hilyard, Hadfield, Wilson, Steigerwalt, Brenner, Breitschwerdt (bib6) 1997; 35 Schwarz (bib21) 1978; 6 Scola, Davoust, Boni, Raoult (bib29) 2002; 8 Kordick, Brown, Shin, Breitschwerdt (bib5) 1999; 37 Gurfield, Boulouis, Chomel, Heller, Kasten, Yamamoto, Piemont (bib9) 1997; 35 Clement, Snell, Walke, Posada, Crandall (bib25) 2002; 184 Dias, do Amaral, Perles, Muniz, Rocha, Machado, André (bib11) 2023; 237 Dehio (bib1) 2004; 58 Kalyaanamoorthy, Minh, Wong, Von Haeseler, Jermiin (bib22) 2017; 14 Mollet, Drancourt, Raoult (bib14) 1997; 26 Nguyen, Schmidt, Von Haeseler, Minh (bib23) 2015; 32 Renesto, Gouvernet, Drancourt, Roux, Raoult (bib18) 2001; 39 Chomel, Boulouis, Maruyama, Breitschwerdt (bib4) 2006; 12 Gutiérrez, Vayssier-Taussat, Buffet, Harrus (bib15) 2017; 17 Muller, Walker, Bittencourt, MacHado, Benevenute, Do Amaral, Gonçalves, André (bib16) 2016; 144 Benson, Karsch-Mizrachi, Lipman, Ostell, Wheeler (bib20) 2004; 32 Avidor, Graidy, Efrat, Leibowitz, Shapira, Schattner, Zimhony, Giladi (bib7) 2004; 42 Borukhov, Nudler (bib31) 2003; 6 Berghoff, Viezens, Guptill, Fabbi, Arvard (bib33) 2007; 153 Furquim, do Amaral, Dias, Gonçalves, Perles, Lima, Narros-Battest, Machado, André (bib10) 2021; 222 Librado, Rozas (bib24) 2009; 25 Breitschwerdt, Maggi, Chomel, Lappin (bib8) 2010; 20 Sepúlveda-García, Alabi, Álvarez, Rojas, Mella, Gonçalves, André, Machado, Müller, Monti (bib17) 2023; 16 Leigh, Bryant (bib26) 2015; 6 Parte, Carbasse, Meier-Kolthoff, Reimer, Göker (bib2) 2020; 70 Jordan, Rogozin, Wolf, Koonin (bib32) 2002; 12 Breitschwerdt (10.1016/j.cimid.2024.102150_bib8) 2010; 20 Furquim (10.1016/j.cimid.2024.102150_bib10) 2021; 222 Clement (10.1016/j.cimid.2024.102150_bib25) 2002; 184 Muller (10.1016/j.cimid.2024.102150_bib16) 2016; 144 Avidor (10.1016/j.cimid.2024.102150_bib7) 2004; 42 Borukhov (10.1016/j.cimid.2024.102150_bib31) 2003; 6 Berghoff (10.1016/j.cimid.2024.102150_bib33) 2007; 153 Parte (10.1016/j.cimid.2024.102150_bib2) 2020; 70 Nguyen (10.1016/j.cimid.2024.102150_bib23) 2015; 32 Schwarz (10.1016/j.cimid.2024.102150_bib21) 1978; 6 Gutiérrez (10.1016/j.cimid.2024.102150_bib15) 2017; 17 Jordan (10.1016/j.cimid.2024.102150_bib32) 2002; 12 Kumar (10.1016/j.cimid.2024.102150_bib28) 2018; 35 Chomel (10.1016/j.cimid.2024.102150_bib4) 2006; 12 Kordick (10.1016/j.cimid.2024.102150_bib5) 1999; 37 Renesto (10.1016/j.cimid.2024.102150_bib18) 2001; 39 Li (10.1016/j.cimid.2024.102150_bib27) 1985; 2 Dehio (10.1016/j.cimid.2024.102150_bib1) 2004; 58 Huwyler (10.1016/j.cimid.2024.102150_bib12) 2017; 74 Bou (10.1016/j.cimid.2024.102150_bib13) 2011; 29 Mollet (10.1016/j.cimid.2024.102150_bib14) 1997; 26 Gurfield (10.1016/j.cimid.2024.102150_bib9) 1997; 35 Altschul (10.1016/j.cimid.2024.102150_bib19) 1990; 215 Leigh (10.1016/j.cimid.2024.102150_bib26) 2015; 6 Benson (10.1016/j.cimid.2024.102150_bib20) 2004; 32 Kordick (10.1016/j.cimid.2024.102150_bib6) 1997; 35 Sepúlveda-García (10.1016/j.cimid.2024.102150_bib17) 2023; 16 Cheslock (10.1016/j.cimid.2024.102150_bib3) 2019; 4 Kalyaanamoorthy (10.1016/j.cimid.2024.102150_bib22) 2017; 14 Dias (10.1016/j.cimid.2024.102150_bib11) 2023; 237 Librado (10.1016/j.cimid.2024.102150_bib24) 2009; 25 Scola (10.1016/j.cimid.2024.102150_bib29) 2002; 8 Gutiérrez (10.1016/j.cimid.2024.102150_bib30) 2015; 81 |
| References_xml | – volume: 6 start-page: 1110 year: 2015 end-page: 1116 ident: bib26 article-title: POPART: full-feature software for haplotype network construction publication-title: Methods Ecol. Evol. contributor: fullname: Bryant – volume: 2 start-page: 150 year: 1985 end-page: 174 ident: bib27 article-title: New method for estimating synonymous and nonsynonymous rates of nucleotide substitution considering the relative likelihood of nucleotide and codon changes publication-title: Mol. Biol. Evol. contributor: fullname: Luo – volume: 58 start-page: 365 year: 2004 end-page: 390 ident: bib1 article-title: Molecular and cellular basis of publication-title: Annu. Rev. Microbiol. contributor: fullname: Dehio – volume: 12 start-page: 389 year: 2006 end-page: 394 ident: bib4 article-title: Bartonella spp. in pets and effect on human health publication-title: Emerg. Infect. Dis. contributor: fullname: Breitschwerdt – volume: 8 start-page: 345 year: 2002 end-page: 351 ident: bib29 article-title: Lack of correlation between Bartonella DNA detection within fleas, serological results, and results of blood culture in a Bartonella-infected stray cat population publication-title: Clin. Microbiol. Infect. contributor: fullname: Raoult – volume: 35 start-page: 1813 year: 1997 end-page: 1818 ident: bib6 article-title: Bartonella clarridgeiae, a newly recognized zoonotic pathogen causing inoculation papules, fever, and lymphadenopathy (cat scratch disease) publication-title: J. Clin. Microbiol contributor: fullname: Breitschwerdt – volume: 74 start-page: 474 year: 2017 end-page: 484 ident: bib12 article-title: Dynamics of co-infection with Bartonella henselae genotypes I and II in naturally infected cats: implications for feline vaccine development publication-title: Microb. Ecol. contributor: fullname: Koehler – volume: 37 start-page: 1536 year: 1999 end-page: 1547 ident: bib5 article-title: Clinical and pathologic evaluation of chronic Bartonella henselae or Bartonella clarridgeiae infection in cats publication-title: J. Clin. Microbiol. contributor: fullname: Breitschwerdt – volume: 6 start-page: 461 year: 1978 end-page: 464 ident: bib21 article-title: Estimatibg the dimension of a model publication-title: Ann. Stat. contributor: fullname: Schwarz – volume: 81 start-page: 5613 year: 2015 end-page: 5621 ident: bib30 article-title: Relationship between the presence of Bartonella species and bacterial loads in cats and cat fleas (Ctenocephalides felis) under natural conditions publication-title: Appl. Environ. Microbiol. contributor: fullname: Harrus – volume: 144 start-page: 773 year: 2016 end-page: 782 ident: bib16 article-title: Prevalence, hematological findings and genetic diversity of Bartonella spp. in domestic cats from Valdivia, Southern Chile publication-title: Parasitology contributor: fullname: André – volume: 70 start-page: 5607 year: 2020 end-page: 5612 ident: bib2 article-title: List of prokaryotic names with standing in nomenclature (LPSN) moves to the DSMZ publication-title: Int. J. Syst. Evol. Microbiol. contributor: fullname: Göker – volume: 215 start-page: 403 year: 1990 end-page: 410 ident: bib19 article-title: Basic local alignment search tool publication-title: J. Mol. Biol. contributor: fullname: Altschul – volume: 4 year: 2019 ident: bib3 article-title: Human bartonellosis: an underappreciated public health problem? publication-title: Trop. Med. Infect. Dis. contributor: fullname: Embers – volume: 6 start-page: 93 year: 2003 end-page: 100 ident: bib31 article-title: RNA polymerase holoenzyme: structure, function and biological implications publication-title: Curr. Opin. Microbiol. contributor: fullname: Nudler – volume: 29 start-page: 601 year: 2011 end-page: 608 ident: bib13 article-title: Métodos de identificación bacteriana en el laboratorio de microbiología publication-title: Enferm. Infecc. Microbiol. Clin. contributor: fullname: Valdezate – volume: 14 start-page: 587 year: 2017 end-page: 589 ident: bib22 article-title: ModelFinder: fast model selection for accurate phylogenetic estimates publication-title: Nat. Methods contributor: fullname: Jermiin – volume: 222 year: 2021 ident: bib10 article-title: Genetic diversity and multilocus sequence typing analysis of Bartonella henselae in domestic cats from Southeastern Brazil publication-title: Acta Trop. contributor: fullname: André – volume: 32 year: 2004 ident: bib20 article-title: GenBank: update publication-title: Nucleic Acids Res. contributor: fullname: Wheeler – volume: 20 start-page: 8 year: 2010 end-page: 30 ident: bib8 article-title: Bartonellosis: an emerging infectious disease of zoonotic importance to animals and human beings publication-title: J. Vet. Emerg. Crit. Care. contributor: fullname: Lappin – volume: 39 start-page: 430 year: 2001 end-page: 437 ident: bib18 article-title: Use of rpoB gene analysis for detection and identification of Bartonella species publication-title: J. Clin. Microbiol. contributor: fullname: Raoult – volume: 25 start-page: 1451 year: 2009 end-page: 1452 ident: bib24 article-title: DnaSP v5: a software for comprehensive analysis of DNA polymorphism data publication-title: Bioinformatics contributor: fullname: Rozas – volume: 35 start-page: 2120 year: 1997 end-page: 2123 ident: bib9 article-title: Coinfection with Bartonella clarridgeiae and Bartonella henselae and with different Bartonella henselae strains in domestic cats publication-title: J. Clin. Microbiol. contributor: fullname: Piemont – volume: 12 start-page: 962 year: 2002 end-page: 968 ident: bib32 article-title: Essential genes are more evolutionarily conserved than are nonessential genes in bacteria publication-title: Genome Res. contributor: fullname: Koonin – volume: 153 start-page: 2045 year: 2007 end-page: 2051 ident: bib33 article-title: Bartonella henselae exists as a mosaic of different genetic variants in the infected host publication-title: Microbiology contributor: fullname: Arvard – volume: 35 start-page: 1547 year: 2018 end-page: 1549 ident: bib28 article-title: MEGA X: molecular evolutionary genetics analysis across computing platforms publication-title: Mol. Biol. Evol. contributor: fullname: Tamura – volume: 184 year: 2002 ident: bib25 article-title: TCS: estimating gene genealogies publication-title: Proc. - Int. Parallel Distrib. Process. Symp. IPDPS 2002 contributor: fullname: Crandall – volume: 42 start-page: 3462 year: 2004 end-page: 3468 ident: bib7 article-title: Bartonella koehlerae, a new cat-associated agent of culture-negative human endocarditis publication-title: J. Clin. Microbiol. contributor: fullname: Giladi – volume: 17 start-page: 42 year: 2017 end-page: 50 ident: bib15 article-title: Guidelines for the isolation, molecular detection, and characterization of Bartonella Species publication-title: Vector-Borne Zoonotic Dis. contributor: fullname: Harrus – volume: 16 year: 2023 ident: bib17 article-title: Bartonella spp. in households with cats: risk factors for infection in cats and human exposure publication-title: One Health contributor: fullname: Monti – volume: 32 start-page: 268 year: 2015 end-page: 274 ident: bib23 article-title: IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies publication-title: Mol. Biol. Evol. contributor: fullname: Minh – volume: 237 year: 2023 ident: bib11 article-title: Multi-locus sequencing typing of Bartonella henselae isolates reveals coinfection with different variants in domestic cats from Midwestern Brazil publication-title: Acta Trop. contributor: fullname: André – volume: 26 start-page: 1005 year: 1997 end-page: 1011 ident: bib14 article-title: rpoB sequence analysis as a novel basis for bacterial identification publication-title: Mol. Microbiol. contributor: fullname: Raoult – volume: 70 start-page: 5607 year: 2020 ident: 10.1016/j.cimid.2024.102150_bib2 article-title: List of prokaryotic names with standing in nomenclature (LPSN) moves to the DSMZ publication-title: Int. J. Syst. Evol. Microbiol. doi: 10.1099/ijsem.0.004332 contributor: fullname: Parte – volume: 35 start-page: 1813 year: 1997 ident: 10.1016/j.cimid.2024.102150_bib6 article-title: Bartonella clarridgeiae, a newly recognized zoonotic pathogen causing inoculation papules, fever, and lymphadenopathy (cat scratch disease) publication-title: J. Clin. Microbiol doi: 10.1128/jcm.35.7.1813-1818.1997 contributor: fullname: Kordick – volume: 153 start-page: 2045 year: 2007 ident: 10.1016/j.cimid.2024.102150_bib33 article-title: Bartonella henselae exists as a mosaic of different genetic variants in the infected host publication-title: Microbiology doi: 10.1099/mic.0.2007/006379-0 contributor: fullname: Berghoff – volume: 4 year: 2019 ident: 10.1016/j.cimid.2024.102150_bib3 article-title: Human bartonellosis: an underappreciated public health problem? publication-title: Trop. Med. Infect. Dis. contributor: fullname: Cheslock – volume: 17 start-page: 42 year: 2017 ident: 10.1016/j.cimid.2024.102150_bib15 article-title: Guidelines for the isolation, molecular detection, and characterization of Bartonella Species publication-title: Vector-Borne Zoonotic Dis. doi: 10.1089/vbz.2016.1956 contributor: fullname: Gutiérrez – volume: 144 start-page: 773 year: 2016 ident: 10.1016/j.cimid.2024.102150_bib16 article-title: Prevalence, hematological findings and genetic diversity of Bartonella spp. in domestic cats from Valdivia, Southern Chile publication-title: Parasitology doi: 10.1017/S003118201600247X contributor: fullname: Muller – volume: 222 year: 2021 ident: 10.1016/j.cimid.2024.102150_bib10 article-title: Genetic diversity and multilocus sequence typing analysis of Bartonella henselae in domestic cats from Southeastern Brazil publication-title: Acta Trop. doi: 10.1016/j.actatropica.2021.106037 contributor: fullname: Furquim – volume: 14 start-page: 587 year: 2017 ident: 10.1016/j.cimid.2024.102150_bib22 article-title: ModelFinder: fast model selection for accurate phylogenetic estimates publication-title: Nat. Methods doi: 10.1038/nmeth.4285 contributor: fullname: Kalyaanamoorthy – volume: 74 start-page: 474 year: 2017 ident: 10.1016/j.cimid.2024.102150_bib12 article-title: Dynamics of co-infection with Bartonella henselae genotypes I and II in naturally infected cats: implications for feline vaccine development publication-title: Microb. Ecol. doi: 10.1007/s00248-017-0936-8 contributor: fullname: Huwyler – volume: 215 start-page: 403 year: 1990 ident: 10.1016/j.cimid.2024.102150_bib19 article-title: Basic local alignment search tool publication-title: J. Mol. Biol. doi: 10.1016/S0022-2836(05)80360-2 contributor: fullname: Altschul – volume: 32 start-page: 268 year: 2015 ident: 10.1016/j.cimid.2024.102150_bib23 article-title: IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies publication-title: Mol. Biol. Evol. doi: 10.1093/molbev/msu300 contributor: fullname: Nguyen – volume: 58 start-page: 365 year: 2004 ident: 10.1016/j.cimid.2024.102150_bib1 article-title: Molecular and cellular basis of Bartonella Pathogenesis publication-title: Annu. Rev. Microbiol. doi: 10.1146/annurev.micro.58.030603.123700 contributor: fullname: Dehio – volume: 6 start-page: 461 year: 1978 ident: 10.1016/j.cimid.2024.102150_bib21 article-title: Estimatibg the dimension of a model publication-title: Ann. Stat. doi: 10.1214/aos/1176344136 contributor: fullname: Schwarz – volume: 16 year: 2023 ident: 10.1016/j.cimid.2024.102150_bib17 article-title: Bartonella spp. in households with cats: risk factors for infection in cats and human exposure publication-title: One Health doi: 10.1016/j.onehlt.2023.100545 contributor: fullname: Sepúlveda-García – volume: 6 start-page: 1110 year: 2015 ident: 10.1016/j.cimid.2024.102150_bib26 article-title: POPART: full-feature software for haplotype network construction publication-title: Methods Ecol. Evol. doi: 10.1111/2041-210X.12410 contributor: fullname: Leigh – volume: 8 start-page: 345 year: 2002 ident: 10.1016/j.cimid.2024.102150_bib29 article-title: Lack of correlation between Bartonella DNA detection within fleas, serological results, and results of blood culture in a Bartonella-infected stray cat population publication-title: Clin. Microbiol. Infect. doi: 10.1046/j.1469-0691.2002.00434.x contributor: fullname: Scola – volume: 81 start-page: 5613 year: 2015 ident: 10.1016/j.cimid.2024.102150_bib30 article-title: Relationship between the presence of Bartonella species and bacterial loads in cats and cat fleas (Ctenocephalides felis) under natural conditions publication-title: Appl. Environ. Microbiol. doi: 10.1128/AEM.01370-15 contributor: fullname: Gutiérrez – volume: 20 start-page: 8 year: 2010 ident: 10.1016/j.cimid.2024.102150_bib8 article-title: Bartonellosis: an emerging infectious disease of zoonotic importance to animals and human beings publication-title: J. Vet. Emerg. Crit. Care. doi: 10.1111/j.1476-4431.2009.00496.x contributor: fullname: Breitschwerdt – volume: 39 start-page: 430 year: 2001 ident: 10.1016/j.cimid.2024.102150_bib18 article-title: Use of rpoB gene analysis for detection and identification of Bartonella species publication-title: J. Clin. Microbiol. doi: 10.1128/JCM.39.2.430-437.2001 contributor: fullname: Renesto – volume: 32 year: 2004 ident: 10.1016/j.cimid.2024.102150_bib20 article-title: GenBank: update publication-title: Nucleic Acids Res. doi: 10.1093/nar/gkh045 contributor: fullname: Benson – volume: 42 start-page: 3462 year: 2004 ident: 10.1016/j.cimid.2024.102150_bib7 article-title: Bartonella koehlerae, a new cat-associated agent of culture-negative human endocarditis publication-title: J. Clin. Microbiol. doi: 10.1128/JCM.42.8.3462-3468.2004 contributor: fullname: Avidor – volume: 29 start-page: 601 year: 2011 ident: 10.1016/j.cimid.2024.102150_bib13 article-title: Métodos de identificación bacteriana en el laboratorio de microbiología publication-title: Enferm. Infecc. Microbiol. Clin. doi: 10.1016/j.eimc.2011.03.012 contributor: fullname: Bou – volume: 184 year: 2002 ident: 10.1016/j.cimid.2024.102150_bib25 article-title: TCS: estimating gene genealogies publication-title: Proc. - Int. Parallel Distrib. Process. Symp. IPDPS 2002 doi: 10.1109/IPDPS.2002.1016585 contributor: fullname: Clement – volume: 12 start-page: 389 year: 2006 ident: 10.1016/j.cimid.2024.102150_bib4 article-title: Bartonella spp. in pets and effect on human health publication-title: Emerg. Infect. Dis. doi: 10.3201/eid1203.050931 contributor: fullname: Chomel – volume: 35 start-page: 2120 year: 1997 ident: 10.1016/j.cimid.2024.102150_bib9 article-title: Coinfection with Bartonella clarridgeiae and Bartonella henselae and with different Bartonella henselae strains in domestic cats publication-title: J. Clin. Microbiol. doi: 10.1128/jcm.35.8.2120-2123.1997 contributor: fullname: Gurfield – volume: 35 start-page: 1547 year: 2018 ident: 10.1016/j.cimid.2024.102150_bib28 article-title: MEGA X: molecular evolutionary genetics analysis across computing platforms publication-title: Mol. Biol. Evol. doi: 10.1093/molbev/msy096 contributor: fullname: Kumar – volume: 26 start-page: 1005 year: 1997 ident: 10.1016/j.cimid.2024.102150_bib14 article-title: rpoB sequence analysis as a novel basis for bacterial identification publication-title: Mol. Microbiol. doi: 10.1046/j.1365-2958.1997.6382009.x contributor: fullname: Mollet – volume: 12 start-page: 962 year: 2002 ident: 10.1016/j.cimid.2024.102150_bib32 article-title: Essential genes are more evolutionarily conserved than are nonessential genes in bacteria publication-title: Genome Res. doi: 10.1101/gr.87702 contributor: fullname: Jordan – volume: 237 year: 2023 ident: 10.1016/j.cimid.2024.102150_bib11 article-title: Multi-locus sequencing typing of Bartonella henselae isolates reveals coinfection with different variants in domestic cats from Midwestern Brazil publication-title: Acta Trop. doi: 10.1016/j.actatropica.2022.106742 contributor: fullname: Dias – volume: 25 start-page: 1451 year: 2009 ident: 10.1016/j.cimid.2024.102150_bib24 article-title: DnaSP v5: a software for comprehensive analysis of DNA polymorphism data publication-title: Bioinformatics doi: 10.1093/bioinformatics/btp187 contributor: fullname: Librado – volume: 37 start-page: 1536 year: 1999 ident: 10.1016/j.cimid.2024.102150_bib5 article-title: Clinical and pathologic evaluation of chronic Bartonella henselae or Bartonella clarridgeiae infection in cats publication-title: J. Clin. Microbiol. doi: 10.1128/JCM.37.5.1536-1547.1999 contributor: fullname: Kordick – volume: 6 start-page: 93 year: 2003 ident: 10.1016/j.cimid.2024.102150_bib31 article-title: RNA polymerase holoenzyme: structure, function and biological implications publication-title: Curr. Opin. Microbiol. doi: 10.1016/S1369-5274(03)00036-5 contributor: fullname: Borukhov – volume: 2 start-page: 150 year: 1985 ident: 10.1016/j.cimid.2024.102150_bib27 article-title: New method for estimating synonymous and nonsynonymous rates of nucleotide substitution considering the relative likelihood of nucleotide and codon changes publication-title: Mol. Biol. Evol. contributor: fullname: Li |
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| Snippet | The study aimed to determine the inter and intra-host Bartonella spp. genetic diversity in cats from Chile. ‘Seventy-nine cats’ blood DNA samples qPCR... The study aimed to determine the inter and intra-host Bartonella spp. genetic diversity in cats from Chile. 'Seventy-nine cats' blood DNA samples qPCR... |
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| SubjectTerms | Animals Bartonella - genetics Bartonella henselae - genetics Bartonella Infections - epidemiology Bartonella Infections - veterinary Bartonella spp Cat Diseases - epidemiology Cats Chile - epidemiology Cloning Coinfection Genetic diversity Genetic Variation Haplotypes Phylogeny |
| Title | Genetic diversity of Bartonella rpoB haplotypes in domestic cats from Chile |
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