Drivers of Phylogenetic Assemblage Structure of the Furnariides, a Widespread Clade of Lowland Neotropical Birds

Species co-occurrence in local assemblages is shaped by distinct processes at different spatial and temporal scales. Here we focus on historical explanations and examine the phylogenetic structure of local assemblages of the Furnariides clade (Aves: Passeriformes), assessing the influence of diversi...

Full description

Saved in:
Bibliographic Details
Published inThe American naturalist Vol. 193; no. 2; p. E41
Main Authors Pinto-Ledezma, Jesús N, Jahn, Alex E, Cueto, Victor R, Diniz-Filho, José Alexandre F, Villalobos, Fabricio
Format Journal Article
LanguageEnglish
Published United States 01.02.2019
Subjects
Online AccessGet more information

Cover

Loading…
Abstract Species co-occurrence in local assemblages is shaped by distinct processes at different spatial and temporal scales. Here we focus on historical explanations and examine the phylogenetic structure of local assemblages of the Furnariides clade (Aves: Passeriformes), assessing the influence of diversification rates on the assembly and species co-occurrence within those assemblages. Using 120 local assemblages across Bolivia and Argentina and a nearly complete phylogeny for the clade, we analyzed assemblage phylogenetic structure, applying a recently developed model (DAMOCLES, or dynamic assembly model of colonization, local extinction, and speciation) accounting for the historical processes of speciation, colonization, and local extinction. We also evaluated how diversification rates determine species co-occurrence. We found that the assembly of Furnariides assemblages can be explained largely by speciation, colonization, and local extinction without invoking current local species interactions. Phylogenetic structure of open habitat assemblages mainly showed clustering, characterized by faster rates of colonization and local extinction than in forest habitats, whereas forest habitat assemblages were congruent with the model's equal rates expectation, thus highlighting the influence of habitat preferences on assembly and co-occurrence patterns. Our results suggest that historical processes are sufficient to explain local assemblage phylogenetic structure, while there is little evidence for species ecological interactions in avian assemblage diversity and composition.
AbstractList Species co-occurrence in local assemblages is shaped by distinct processes at different spatial and temporal scales. Here we focus on historical explanations and examine the phylogenetic structure of local assemblages of the Furnariides clade (Aves: Passeriformes), assessing the influence of diversification rates on the assembly and species co-occurrence within those assemblages. Using 120 local assemblages across Bolivia and Argentina and a nearly complete phylogeny for the clade, we analyzed assemblage phylogenetic structure, applying a recently developed model (DAMOCLES, or dynamic assembly model of colonization, local extinction, and speciation) accounting for the historical processes of speciation, colonization, and local extinction. We also evaluated how diversification rates determine species co-occurrence. We found that the assembly of Furnariides assemblages can be explained largely by speciation, colonization, and local extinction without invoking current local species interactions. Phylogenetic structure of open habitat assemblages mainly showed clustering, characterized by faster rates of colonization and local extinction than in forest habitats, whereas forest habitat assemblages were congruent with the model's equal rates expectation, thus highlighting the influence of habitat preferences on assembly and co-occurrence patterns. Our results suggest that historical processes are sufficient to explain local assemblage phylogenetic structure, while there is little evidence for species ecological interactions in avian assemblage diversity and composition.
Author Cueto, Victor R
Jahn, Alex E
Diniz-Filho, José Alexandre F
Villalobos, Fabricio
Pinto-Ledezma, Jesús N
Author_xml – sequence: 1
  givenname: Jesús N
  surname: Pinto-Ledezma
  fullname: Pinto-Ledezma, Jesús N
– sequence: 2
  givenname: Alex E
  surname: Jahn
  fullname: Jahn, Alex E
– sequence: 3
  givenname: Victor R
  surname: Cueto
  fullname: Cueto, Victor R
– sequence: 4
  givenname: José Alexandre F
  surname: Diniz-Filho
  fullname: Diniz-Filho, José Alexandre F
– sequence: 5
  givenname: Fabricio
  surname: Villalobos
  fullname: Villalobos, Fabricio
BackLink https://www.ncbi.nlm.nih.gov/pubmed/30720362$$D View this record in MEDLINE/PubMed
BookMark eNo1j8tKxDAYRoMozkV9BMkDWM2lSZvl2HFUKCqouBzS9M9MpG1K0irz9jpeVt-3OBw4M3TY-Q4QOqPkkpJcXmWESCUP0JQKniWCMz5BsxjfCSEqVeIYTTjJGOGSTVG_DO4DQsTe4qftrvEb6GBwBi9ihLZq9Abw8xBGM4wB9tCwBbwaQ6eDczXEC6zx2_70AXSNi0bXP1jpPxvd1fgB_BB874xu8LULdTxBR1Y3EU7_do5eVzcvxV1SPt7eF4syMZzkQ8LSSimeKSYUk9IwSVlKU8ap4XkutaiMskwKIFkOQhBDjeVacmur716bAZuj819vP1Yt1Os-uFaH3fo_nX0BE2JY-A
CitedBy_id crossref_primary_10_3389_fevo_2022_951271
crossref_primary_10_1002_ecm_1420
crossref_primary_10_1038_s41598_021_96047_7
crossref_primary_10_1111_jbi_14581
crossref_primary_10_1093_biolinnean_blab079
crossref_primary_10_1111_geb_13055
ContentType Journal Article
DBID CGR
CUY
CVF
ECM
EIF
NPM
DOI 10.1086/700696
DatabaseName Medline
MEDLINE
MEDLINE (Ovid)
MEDLINE
MEDLINE
PubMed
DatabaseTitle MEDLINE
Medline Complete
MEDLINE with Full Text
PubMed
MEDLINE (Ovid)
DatabaseTitleList MEDLINE
Database_xml – sequence: 1
  dbid: NPM
  name: PubMed
  url: https://proxy.k.utb.cz/login?url=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed
  sourceTypes: Index Database
– sequence: 2
  dbid: EIF
  name: MEDLINE
  url: https://proxy.k.utb.cz/login?url=https://www.webofscience.com/wos/medline/basic-search
  sourceTypes: Index Database
DeliveryMethod no_fulltext_linktorsrc
Discipline Biology
EISSN 1537-5323
ExternalDocumentID 30720362
Genre Research Support, Non-U.S. Gov't
Journal Article
GeographicLocations South America
GeographicLocations_xml – name: South America
GroupedDBID ---
--Z
-DZ
-~X
..I
0R~
123
23M
2AX
4.4
42X
5.N
53G
5GY
692
6J9
79B
85S
9EF
9EJ
AACYF
AAHKG
AAISJ
AAKGQ
AAUTI
AAXPP
AAYJJ
ABABT
ABBHK
ABEFU
ABPEO
ABPLY
ABPPZ
ABTLG
ABXSQ
ACGFS
ACGOD
ACNCT
ACPRK
ACPVT
ACSTJ
ADACV
ADMHG
ADTZG
ADULT
AEGXH
AENEX
AEUPB
AFAZZ
AFFDN
AFFNX
AFRAH
AGUYK
AHXOZ
AI.
AIDAL
AILXY
ALMA_UNASSIGNED_HOLDINGS
AQVQM
ARNXZ
AS~
BKOMP
CBGCD
CGR
CJ0
CS3
CUY
CUYZI
CVF
D0L
DEVKO
DGPHC
DOOOF
EBD
EBS
ECM
EDH
EIF
EJD
EMOBN
EZTEY
F5P
G8K
GTFYD
HF~
HGD
HQ2
HTVGU
HZ~
IPSME
JAAYA
JBMMH
JBS
JEB
JENOY
JHFFW
JKQEH
JLS
JLXEF
JPM
JSODD
JST
K-O
KQ8
L7B
LU7
MVM
NEJ
NHB
NPM
O9-
OK1
P-O
P2P
PQQKQ
QZG
RCP
SA0
SV3
TN5
UFCQG
UHB
UKR
V62
VH1
VJK
VQA
WH7
XOL
XSW
YZZ
Z0I
ZCA
ZCG
ZXP
~02
~KM
ID FETCH-LOGICAL-c308t-24b99379259266c2612414231c3886a5bc9f265e078e550c1cf3a63ffb532f7e2
IngestDate Wed Oct 16 00:47:31 EDT 2024
IsPeerReviewed true
IsScholarly true
Issue 2
Keywords species assemblage
community phylogenetics
historical processes
passerine birds
assembly processes
Language English
LinkModel OpenURL
MergedId FETCHMERGED-LOGICAL-c308t-24b99379259266c2612414231c3886a5bc9f265e078e550c1cf3a63ffb532f7e2
PMID 30720362
ParticipantIDs pubmed_primary_30720362
PublicationCentury 2000
PublicationDate 2019-02-00
PublicationDateYYYYMMDD 2019-02-01
PublicationDate_xml – month: 02
  year: 2019
  text: 2019-02-00
PublicationDecade 2010
PublicationPlace United States
PublicationPlace_xml – name: United States
PublicationTitle The American naturalist
PublicationTitleAlternate Am Nat
PublicationYear 2019
References 31094603 - Am Nat. 2019 Jun;193(6):897
References_xml
SSID ssj0009495
Score 2.3687642
Snippet Species co-occurrence in local assemblages is shaped by distinct processes at different spatial and temporal scales. Here we focus on historical explanations...
SourceID pubmed
SourceType Index Database
StartPage E41
SubjectTerms Animals
Ecosystem
Genetic Speciation
Passeriformes - genetics
Phylogeny
South America
Title Drivers of Phylogenetic Assemblage Structure of the Furnariides, a Widespread Clade of Lowland Neotropical Birds
URI https://www.ncbi.nlm.nih.gov/pubmed/30720362
Volume 193
hasFullText
inHoldings 1
isFullTextHit
isPrint
link http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwnV1Lb9swDBbSDRt6GfZe94IO26nTEFuybB_7Coqi62Xp0FthyRJioLGNzMXQ_Kf9x5GSHQvdhj0uhmDJTiJ-ZkiTH0nIO85TkZcyZjwTORM2ilghU8tKCcM4UkIqdBQ_ncnjc3FykVxMJt-DrKXrTn3U61_ySv5HqnAO5Ios2X-Q7OamcALGIF84goTh-FcyPly5rAqXx7YAzxsWIicR99ws1RWm43x29WExStAnA8zwvquqKr1-KEAvwLAF27HEDpmlW3jafMOMR1CBTbdqWifI_WrlScGDLTsfSSn1risQisUURz51VXcNOzWlWS99Qi584gF_v7_3dYz_nBSLeuDZBKSIa-O6O-1-qTCmMCY1HlZ1tWaz6mrR9OELH-gfeDrwM2fhewykTm1yQsyge1OWcE8_3ihn3z-xR2EcqNojXzDrp7-AqYtIpViCWYYLQHTt0gEB1BqGX-M_z94qxT1MbZGtNMM-IWf4amio8AyuZtC8yn-BbXJ_uOiW3-Lsl_lD8qB3POieR9EjMjH1Y3LPtyK9eULaHku0sTTEEh2xRDdYwkWAJRpg6QMt6Igk6pCEy3ok0QBJ1CHpKTmfHc0PjlnfjYNpPs06FguFtmwO_jIYdRpLz4kIjPFI8yyTRaJ0bmOZGLA5Dbi9OtKWF5Jbq0CmNjXxM3KnbmrzgtDE6LxMIyO1KkSaiCJTU5tpmXKudFboHfLcb9Vl60uuXA6b-PK3M6_I9oiq1-SuhWfcvAGDsVNvnaB-AHm5awk
link.rule.ids 780
linkProvider National Library of Medicine
openUrl ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=Drivers+of+Phylogenetic+Assemblage+Structure+of+the+Furnariides%2C+a+Widespread+Clade+of+Lowland+Neotropical+Birds&rft.jtitle=The+American+naturalist&rft.au=Pinto-Ledezma%2C+Jes%C3%BAs+N&rft.au=Jahn%2C+Alex+E&rft.au=Cueto%2C+Victor+R&rft.au=Diniz-Filho%2C+Jos%C3%A9+Alexandre+F&rft.date=2019-02-01&rft.eissn=1537-5323&rft.volume=193&rft.issue=2&rft.spage=E41&rft_id=info:doi/10.1086%2F700696&rft_id=info%3Apmid%2F30720362&rft_id=info%3Apmid%2F30720362&rft.externalDocID=30720362