BIOINTMED: integrated biomedical knowledge base with ontologies and clinical trials
Biomedical data are complex and heterogeneous. An ample reliable quantity of data is important for understanding and exploring the domain. The work aims to integrate biomedical data from various heterogeneous sources like dictionaries or corpus and amalgamate them into a uniform format for easier ac...
Saved in:
| Published in | Medical & biological engineering & computing Vol. 58; no. 10; pp. 2339 - 2354 |
|---|---|
| Main Authors | , , , |
| Format | Journal Article |
| Language | English |
| Published |
Berlin/Heidelberg
Springer Berlin Heidelberg
01.10.2020
Springer Nature B.V |
| Subjects | |
| Online Access | Get full text |
Cover
Loading…
| Abstract | Biomedical data are complex and heterogeneous. An ample reliable quantity of data is important for understanding and exploring the domain. The work aims to integrate biomedical data from various heterogeneous sources like dictionaries or corpus and amalgamate them into a uniform format for easier access by the end-user like biologist, pharmacist, and data scientist. The proposed integrated biomedical knowledge base, BIOINTMED, has 11,299, 12,981, 4428, 61,491, 48,663, and 13,146 unique entities for drugs, diseases, targets, genes, biomedical pathways, and adverse events, respectively. The uniform aggregated collection is also explored to study the interaction among these entity pairs. Finally, a complete statistical analysis of the consolidated biomedical entities is provided. |
|---|---|
| AbstractList | Biomedical data are complex and heterogeneous. An ample reliable quantity of data is important for understanding and exploring the domain. The work aims to integrate biomedical data from various heterogeneous sources like dictionaries or corpus and amalgamate them into a uniform format for easier access by the end-user like biologist, pharmacist, and data scientist. The proposed integrated biomedical knowledge base, BIOINTMED, has 11,299, 12,981, 4428, 61,491, 48,663, and 13,146 unique entities for drugs, diseases, targets, genes, biomedical pathways, and adverse events, respectively. The uniform aggregated collection is also explored to study the interaction among these entity pairs. Finally, a complete statistical analysis of the consolidated biomedical entities is provided. |
| Author | Saha, Ankita Sarkar, Sudeshna Mukhopadhyay, Jayanta Gattu, Mahanandeeshwar |
| Author_xml | – sequence: 1 givenname: Ankita orcidid: 0000-0003-3925-9370 surname: Saha fullname: Saha, Ankita email: ankitasaha@iitkgp.ac.in – sequence: 2 givenname: Jayanta surname: Mukhopadhyay fullname: Mukhopadhyay, Jayanta – sequence: 3 givenname: Sudeshna surname: Sarkar fullname: Sarkar, Sudeshna – sequence: 4 givenname: Mahanandeeshwar surname: Gattu fullname: Gattu, Mahanandeeshwar |
| BookMark | eNp9kE9PAjEQxRuDiYB-AU-bePGy2mm7f_CmiEqCchDPTdnOYnFpsV1C_PYWMDHx4GEyk8zvvby8HulYZ5GQc6BXQGlxHQAyKFLKaBxGIaVHpAuFiIcQokO6FER8AZQnpBfCklIGGRNd8no3no5fZs-j-5vE2BYXXrWok7lxK9SmUk3yYd22Qb3AZK4CJlvTvifOtq5xC4MhUVYnVWPsnm29UU04Jcd1XHj2s_vk7WE0Gz6lk-njeHg7SStOeZsiZHPGq0EewyDNtRCDaq45y5HWqtAalaBYsLLmrGDAhdJ1lg8A65ILUULO--Ty4Lv27nODoZUrEypsGmXRbYJkIgoHImM8ohd_0KXbeBvTRUqwvCyh2BmyA1V5F4LHWq69WSn_JYHKXc_y0LOMPct9z5JGET-IQoTtAv2v9T-qbwH-gCE |
| Cites_doi | 10.1371/journal.pcbi.1002826 10.1016/j.talanta.2017.04.076 10.1093/nar/gkw943 10.1093/nar/gkq1237 10.1089/adt.2016.742 10.1016/j.knosys.2014.10.001 10.1093/nar/gkj067 10.1093/nar/gku989 10.4018/978-1-59904-252-7.ch010 10.1093/nar/gkm958 10.3389/fphar.2019.00975 10.1093/nar/gkp1002 10.1177/1177625017696074 10.1016/j.drudis.2010.10.003 10.1016/j.vascn.2017.09.141 10.1093/nar/gkv951 10.3174/ajnr.A4696 10.1007/978-3-642-23740-9 10.1093/nar/28.1.27 10.1371/journal.pone.0116656 10.1093/nar/gkv1075 10.1289/txg.6028 |
| ContentType | Journal Article |
| Copyright | International Federation for Medical and Biological Engineering 2020 International Federation for Medical and Biological Engineering 2020. |
| Copyright_xml | – notice: International Federation for Medical and Biological Engineering 2020 – notice: International Federation for Medical and Biological Engineering 2020. |
| DBID | AAYXX CITATION 3V. 7RV 7SC 7TB 7TS 7WY 7WZ 7X7 7XB 87Z 88A 88E 88I 8AL 8AO 8FD 8FE 8FG 8FH 8FI 8FJ 8FK 8FL ABUWG AFKRA ARAPS AZQEC BBNVY BENPR BEZIV BGLVJ BHPHI CCPQU DWQXO FR3 FRNLG FYUFA F~G GHDGH GNUQQ HCIFZ JQ2 K60 K6~ K7- K9. KB0 L.- L7M LK8 L~C L~D M0C M0N M0S M1P M2P M7P M7Z NAPCQ P5Z P62 P64 PQBIZ PQBZA PQEST PQQKQ PQUKI Q9U 7X8 |
| DOI | 10.1007/s11517-020-02201-0 |
| DatabaseName | CrossRef ProQuest Central (Corporate) Nursing & Allied Health Database Computer and Information Systems Abstracts Mechanical & Transportation Engineering Abstracts Physical Education Index ABI/INFORM Collection ABI/INFORM Global (PDF only) ProQuest - Health & Medical Complete保健、医学与药学数据库 ProQuest Central (purchase pre-March 2016) ABI/INFORM Collection Biology Database (Alumni Edition) Medical Database (Alumni Edition) Science Database (Alumni Edition) Computing Database (Alumni Edition) ProQuest Pharma Collection Technology Research Database ProQuest SciTech Collection ProQuest Technology Collection ProQuest Natural Science Collection Hospital Premium Collection Hospital Premium Collection (Alumni Edition) ProQuest Central (Alumni) (purchase pre-March 2016) ABI/INFORM Collection (Alumni Edition) ProQuest Central (Alumni) ProQuest Central UK/Ireland Advanced Technologies & Aerospace Collection ProQuest Central Essentials Biological Science Collection AUTh Library subscriptions: ProQuest Central Business Premium Collection Technology Collection ProQuest Natural Science Collection ProQuest One Community College ProQuest Central Engineering Research Database Business Premium Collection (Alumni) Health Research Premium Collection ABI/INFORM Global (Corporate) Health Research Premium Collection (Alumni) ProQuest Central Student SciTech Premium Collection (Proquest) (PQ_SDU_P3) ProQuest Computer Science Collection ProQuest Business Collection (Alumni Edition) ProQuest Business Collection Computer Science Database ProQuest Health & Medical Complete (Alumni) Nursing & Allied Health Database (Alumni Edition) ABI/INFORM Professional Advanced Advanced Technologies Database with Aerospace ProQuest Biological Science Collection Computer and Information Systems Abstracts Academic Computer and Information Systems Abstracts Professional ABI/INFORM Global (ProQuest) Computing Database Health & Medical Collection (Alumni Edition) PML(ProQuest Medical Library) ProQuest Science Journals ProQuest Biological Science Journals Biochemistry Abstracts 1 Nursing & Allied Health Premium ProQuest advanced technologies & aerospace journals ProQuest Advanced Technologies & Aerospace Collection Biotechnology and BioEngineering Abstracts One Business (ProQuest) ProQuest One Business (Alumni) ProQuest One Academic Eastern Edition (DO NOT USE) ProQuest One Academic ProQuest One Academic UKI Edition ProQuest Central Basic MEDLINE - Academic |
| DatabaseTitle | CrossRef ProQuest Business Collection (Alumni Edition) Computer Science Database ProQuest Central Student ProQuest Advanced Technologies & Aerospace Collection ProQuest Central Essentials ProQuest Computer Science Collection Computer and Information Systems Abstracts SciTech Premium Collection ABI/INFORM Complete Health Research Premium Collection Natural Science Collection Biological Science Collection ProQuest Medical Library (Alumni) Advanced Technologies & Aerospace Collection Business Premium Collection ABI/INFORM Global ProQuest Science Journals (Alumni Edition) ProQuest Biological Science Collection ProQuest One Academic Eastern Edition ProQuest Hospital Collection ProQuest Technology Collection Health Research Premium Collection (Alumni) Biological Science Database ProQuest Business Collection ProQuest Hospital Collection (Alumni) Biotechnology and BioEngineering Abstracts Nursing & Allied Health Premium ProQuest Health & Medical Complete ProQuest One Academic UKI Edition ProQuest Nursing & Allied Health Source (Alumni) Engineering Research Database ProQuest One Academic ABI/INFORM Global (Corporate) ProQuest One Business Technology Collection Technology Research Database Computer and Information Systems Abstracts – Academic Mechanical & Transportation Engineering Abstracts ProQuest Health & Medical Complete (Alumni) ProQuest Central (Alumni Edition) ProQuest One Community College ProQuest Natural Science Collection ProQuest Pharma Collection Physical Education Index ProQuest Biology Journals (Alumni Edition) ProQuest Central ABI/INFORM Professional Advanced Health and Medicine Complete (Alumni Edition) ProQuest Central Korea Advanced Technologies Database with Aerospace ABI/INFORM Complete (Alumni Edition) ProQuest Computing ABI/INFORM Global (Alumni Edition) ProQuest Central Basic ProQuest Science Journals ProQuest Computing (Alumni Edition) ProQuest Nursing & Allied Health Source ProQuest SciTech Collection Computer and Information Systems Abstracts Professional Advanced Technologies & Aerospace Database ProQuest Medical Library ProQuest One Business (Alumni) Biochemistry Abstracts 1 ProQuest Central (Alumni) Business Premium Collection (Alumni) MEDLINE - Academic |
| DatabaseTitleList | ProQuest Business Collection (Alumni Edition) |
| Database_xml | – sequence: 1 dbid: 8FG name: ProQuest Technology Collection url: https://search.proquest.com/technologycollection1 sourceTypes: Aggregation Database |
| DeliveryMethod | fulltext_linktorsrc |
| Discipline | Medicine |
| EISSN | 1741-0444 |
| EndPage | 2354 |
| ExternalDocumentID | 10_1007_s11517_020_02201_0 |
| GrantInformation_xml | – fundername: Indian Institute of Technology Kharagpur funderid: https://doi.org/10.13039/501100008984 |
| GroupedDBID | --- -4W -5B -5G -BR -EM -Y2 -~C -~X .4S .55 .86 .DC .GJ .VR 04C 06D 0R~ 0VY 1N0 1SB 2.D 203 28- 29M 29~ 2J2 2JN 2JY 2KG 2KM 2LR 2VQ 2~H 30V 36B 3V. 4.4 406 408 40D 40E 53G 5GY 5QI 5RE 5VS 67Z 6NX 7RV 7WY 7X7 88A 88E 88I 8AO 8FE 8FG 8FH 8FI 8FJ 8FL 8TC 8UJ 8VB 95- 95. 95~ 96X AAAVM AABHQ AABYN AAFGU AAHNG AAIAL AAJKR AANXM AANZL AAPBV AARHV AARTL AATNV AATVU AAUYE AAWCG AAWTL AAYFA AAYIU AAYQN AAYTO ABBBX ABDBF ABDZT ABECU ABELW ABFGW ABFTD ABFTV ABHLI ABHQN ABIPD ABJNI ABJOX ABKAS ABKCH ABKTR ABMNI ABMQK ABNWP ABPLI ABPTK ABQBU ABSXP ABTEG ABTHY ABTKH ABTMW ABULA ABUWG ABWNU ABXPI ACBMV ACBNA ACBRV ACBXY ACBYP ACGFO ACGFS ACGOD ACHSB ACHXU ACIGE ACIPQ ACIWK ACKNC ACMDZ ACMLO ACOKC ACOMO ACPRK ACTTH ACVWB ACWMK ADBBV ADHHG ADHIR ADINQ ADJJI ADKNI ADKPE ADMDM ADOAH ADOXG ADRFC ADTPH ADURQ ADYFF ADYPR ADZKW AEBTG AEEQQ AEFIE AEFTE AEGAL AEGNC AEJHL AEJRE AEKMD AEMOZ AENEX AEOHA AEPYU AEQTP AESKC AESTI AETLH AEVLU AEVTX AEXYK AFEXP AFGCZ AFKRA AFLOW AFNRJ AFQWF AFRAH AFWTZ AFZKB AGAYW AGDGC AGGBP AGGDS AGJBK AGMZJ AGQMX AGWIL AGWZB AGYKE AHAVH AHBYD AHIZS AHKAY AHMBA AHSBF AHYZX AIAKS AIIXL AILAN AIMYW AITGF AJBLW AJDOV AJRNO AJZVZ AKMHD AKQUC AKVCP ALMA_UNASSIGNED_HOLDINGS ALWAN AMKLP AMXSW AMYLF AMYQR AOCGG AOSHJ ARAPS ARCSS ARMRJ AXYYD AZFZN AZQEC B-. B0M BA0 BBNVY BBWZM BDATZ BENPR BEZIV BGLVJ BGNMA BHPHI BKEYQ BMSDO BPHCQ BVXVI CAG CCPQU COF CS3 CSCUP DDRTE DNIVK DPUIP DU5 DWQXO EAD EAP EAS EBA EBD EBLON EBR EBS EBU ECS EDO EHE EIHBH EIOEI EJD EMB EMK EMOBN EPL ESBYG EST ESX EX3 F5P FEDTE FERAY FFXSO FIGPU FINBP FNLPD FRNLG FRRFC FSGXE FWDCC FYUFA G8K GGCAI GGRSB GJIRD GNUQQ GNWQR GQ6 GQ7 GROUPED_ABI_INFORM_COMPLETE HCIFZ HF~ HG5 HG6 HMCUK HMJXF HRMNR HVGLF HZ~ I-F IHE IJ- IKXTQ IMOTQ ITM IWAJR IXC IXE IZQ I~X I~Z J-C J0Z JBSCW JZLTJ K1G K60 K6V K6~ K7- KDC KOV L7B LAI LK8 LLZTM M0C M0L M0N M1P M2P M43 M4Y M7P MA- MK~ ML0 ML~ N2Q N9A NAPCQ NB0 NDZJH NF0 NPVJJ NQJWS NU0 O9- O93 O9G O9I O9J P19 P2P P62 P9P PF0 PQBIZ PQQKQ PROAC PSQYO PT4 PT5 Q2X QOK QOR QOS QWB R4E R89 R9I RHV RIG RNI ROL RPX RSV RXW RZK S16 S1Z S26 S27 S28 S3B SAP SBY SCLPG SDH SDM SEG SHX SISQX SJYHP SNE SNPRN SNX SOHCF SOJ SPISZ SRMVM SSLCW SSXJD STPWE SV3 SZN T13 T16 TAE TH9 TSG TSK TSV TUC TUS U2A U9L UG4 UKHRP UNUBA UOJIU UTJUX UZXMN VC2 VFIZW W23 W48 WK8 WOW X7M YLTOR Z45 Z7R Z7U Z7X Z7Y Z7Z Z82 Z83 Z87 Z88 Z8M Z8O Z8R Z8T Z8V Z8W Z91 Z92 ZGI ZL0 ZMTXR ZOVNA ZXP ~8M ~EX ~KM AACDK AAEOY AAJBT AAQLM AASML AAYXX AAYZH ABAKF ABDPE ACAOD ACDTI ACZOJ AEFQL AEMSY AFBBN AGQEE AGRTI AIGIU ALIPV CITATION H13 PQBZA 7SC 7TB 7TS 7XB 8AL 8FD 8FK FR3 JQ2 K9. L.- L7M L~C L~D M7Z P64 PQEST PQUKI Q9U 7X8 |
| ID | FETCH-LOGICAL-c303t-e15b23c96002e06d449cbd326e0fa7ddea40e728f3272134adf5691ef83448163 |
| IEDL.DBID | 7X7 |
| ISSN | 0140-0118 |
| IngestDate | Wed Dec 04 02:46:19 EST 2024 Tue Nov 19 05:01:30 EST 2024 Thu Nov 21 23:14:48 EST 2024 Sat Dec 16 12:02:27 EST 2023 |
| IsPeerReviewed | true |
| IsScholarly | true |
| Issue | 10 |
| Keywords | Clinical trials Dictionaries Biomedical integrated system Data integration Biomedical knowledge base |
| Language | English |
| LinkModel | DirectLink |
| MergedId | FETCHMERGED-LOGICAL-c303t-e15b23c96002e06d449cbd326e0fa7ddea40e728f3272134adf5691ef83448163 |
| Notes | ObjectType-Article-1 SourceType-Scholarly Journals-1 ObjectType-Feature-2 content type line 23 |
| ORCID | 0000-0003-3925-9370 |
| PQID | 2442688176 |
| PQPubID | 54161 |
| PageCount | 16 |
| ParticipantIDs | proquest_miscellaneous_2427294523 proquest_journals_2442688176 crossref_primary_10_1007_s11517_020_02201_0 springer_journals_10_1007_s11517_020_02201_0 |
| PublicationCentury | 2000 |
| PublicationDate | 2020-10-01 |
| PublicationDateYYYYMMDD | 2020-10-01 |
| PublicationDate_xml | – month: 10 year: 2020 text: 2020-10-01 day: 01 |
| PublicationDecade | 2020 |
| PublicationPlace | Berlin/Heidelberg |
| PublicationPlace_xml | – name: Berlin/Heidelberg – name: Heidelberg |
| PublicationTitle | Medical & biological engineering & computing |
| PublicationTitleAbbrev | Med Biol Eng Comput |
| PublicationYear | 2020 |
| Publisher | Springer Berlin Heidelberg Springer Nature B.V |
| Publisher_xml | – name: Springer Berlin Heidelberg – name: Springer Nature B.V |
| References | Bai, Pan, Guo, Zhao, Shen, Wang, Liu, Cheng, Qin, Qian (CR7) 2017; 171 CR19 CR18 Shadia, Sirarat, Darrell (CR3) 2017; 11 CR17 CR39 Federer, Yoo, Tan (CR5) 2016; 14 CR38 CR15 CR37 CR36 CR13 CR34 CR11 CR33 CR32 CR31 CR30 Maglott, Jim, Pruitt, Tatusova (CR35) 2011; 39 Payne (CR6) 2012; 8 CR2 CR4 Pinero, Bravo, Queralt-Rosinach, Gutierrez-Sacristan, Deu-Pons, Centeno, Garcia-Garcia, Sanz, Furlong (CR1) 2016; 45 CR8 CR29 CR28 CR9 CR27 CR26 CR25 CR24 CR23 CR22 Consortium (CR16) 2014; 43 CR21 CR20 Fung, Bodenreider (CR12) 2019 Wishart, Knox, Guo, Shrivastava, Hassanali, Stothard, Chang, Woolsey (CR14) 2006; 34 Maree, Belkhatir (CR10) 2015; 73 KW Fung (2201_CR12) 2019 2201_CR28 2201_CR27 2201_CR26 2201_CR25 2201_CR29 D Maglott (2201_CR35) 2011; 39 2201_CR20 TU Consortium (2201_CR16) 2014; 43 2201_CR8 2201_CR24 OPR Payne (2201_CR6) 2012; 8 2201_CR9 2201_CR23 2201_CR22 2201_CR21 Z Shadia (2201_CR3) 2017; 11 2201_CR2 D Wishart (2201_CR14) 2006; 34 2201_CR4 M Maree (2201_CR10) 2015; 73 H Bai (2201_CR7) 2017; 171 2201_CR17 2201_CR39 2201_CR38 2201_CR15 2201_CR37 2201_CR36 2201_CR19 2201_CR18 2201_CR31 2201_CR30 2201_CR13 2201_CR34 2201_CR11 2201_CR33 C Federer (2201_CR5) 2016; 14 2201_CR32 J Pinero (2201_CR1) 2016; 45 |
| References_xml | – ident: CR22 – ident: CR18 – volume: 8 start-page: 12 year: 2012 ident: CR6 article-title: Chapter 1: Biomedical knowledge integration publication-title: PLOS Comput Biol doi: 10.1371/journal.pcbi.1002826 contributor: fullname: Payne – ident: CR4 – volume: 171 start-page: 124 year: 2017 end-page: 131 ident: CR7 article-title: Synthesis of hydrazide-functionalized hydrophilic polymer hybrid graphene oxide for highly efficient n-glycopeptide enrichment and identification by mass spectrometry publication-title: Talanta doi: 10.1016/j.talanta.2017.04.076 contributor: fullname: Qian – ident: CR39 – ident: CR2 – ident: CR37 – ident: CR30 – ident: CR33 – volume: 45 start-page: D833 issue: D1 year: 2016 end-page: D839 ident: CR1 article-title: DisGeNET: a comprehensive platform integrating information on human disease-associated genes and variants publication-title: Nucleic Acids Res doi: 10.1093/nar/gkw943 contributor: fullname: Furlong – ident: CR29 – volume: 11 start-page: 1177625017696075 year: 2017 ident: CR3 article-title: Use of biomedical ontologies for integration of biological knowledge for learning and prediction of adverse drug reactions publication-title: Gene Regul Syst Biol contributor: fullname: Darrell – ident: CR8 – ident: CR25 – volume: 39 start-page: D52 year: 2011 end-page: D57 ident: CR35 article-title: Entrez Gene: gene-centered information at NCBI publication-title: Nucleic Acids Res doi: 10.1093/nar/gkq1237 contributor: fullname: Tatusova – ident: CR27 – ident: CR23 – ident: CR21 – ident: CR19 – start-page: 313 year: 2019 end-page: 339 ident: CR12 publication-title: Knowledge representation and ontologies contributor: fullname: Bodenreider – volume: 14 start-page: 557 issue: 10 year: 2016 end-page: 566 ident: CR5 article-title: Big data mining and adverse event pattern analysis in clinical drug trials publication-title: ASSAY Drug Dev Technol doi: 10.1089/adt.2016.742 contributor: fullname: Tan – ident: CR15 – ident: CR38 – ident: CR17 – ident: CR31 – ident: CR13 – ident: CR11 – ident: CR9 – volume: 73 start-page: 199 year: 2015 end-page: 211 ident: CR10 article-title: Addressing semantic heterogeneity through multiple knowledge base assisted merging of domain-specific ontologies publication-title: Knowl Based Syst doi: 10.1016/j.knosys.2014.10.001 contributor: fullname: Belkhatir – ident: CR32 – ident: CR34 – ident: CR36 – volume: 34 start-page: D668 year: 2006 end-page: D672 ident: CR14 article-title: DrugBank: a comprehensive resource for in silico drug discovery and exploration publication-title: Nucleic Acids Res doi: 10.1093/nar/gkj067 contributor: fullname: Woolsey – volume: 43 start-page: D204 issue: D1 year: 2014 end-page: D212 ident: CR16 article-title: UniProt: a hub for protein information publication-title: Nucleic Acids Res doi: 10.1093/nar/gku989 contributor: fullname: Consortium – ident: CR28 – ident: CR26 – ident: CR24 – ident: CR20 – ident: 2201_CR9 doi: 10.4018/978-1-59904-252-7.ch010 – ident: 2201_CR34 – ident: 2201_CR36 – ident: 2201_CR38 – volume: 14 start-page: 557 issue: 10 year: 2016 ident: 2201_CR5 publication-title: ASSAY Drug Dev Technol doi: 10.1089/adt.2016.742 contributor: fullname: C Federer – volume: 45 start-page: D833 issue: D1 year: 2016 ident: 2201_CR1 publication-title: Nucleic Acids Res doi: 10.1093/nar/gkw943 contributor: fullname: J Pinero – ident: 2201_CR17 – ident: 2201_CR15 – ident: 2201_CR13 doi: 10.1093/nar/gkm958 – ident: 2201_CR30 – ident: 2201_CR11 doi: 10.3389/fphar.2019.00975 – ident: 2201_CR23 – start-page: 313 volume-title: Knowledge representation and ontologies year: 2019 ident: 2201_CR12 contributor: fullname: KW Fung – ident: 2201_CR25 doi: 10.1093/nar/gkp1002 – volume: 11 start-page: 117762501769607 year: 2017 ident: 2201_CR3 publication-title: Gene Regul Syst Biol doi: 10.1177/1177625017696074 contributor: fullname: Z Shadia – volume: 43 start-page: D204 issue: D1 year: 2014 ident: 2201_CR16 publication-title: Nucleic Acids Res doi: 10.1093/nar/gku989 contributor: fullname: TU Consortium – ident: 2201_CR29 – volume: 39 start-page: D52 year: 2011 ident: 2201_CR35 publication-title: Nucleic Acids Res doi: 10.1093/nar/gkq1237 contributor: fullname: D Maglott – ident: 2201_CR19 doi: 10.1016/j.drudis.2010.10.003 – ident: 2201_CR21 – ident: 2201_CR2 doi: 10.1016/j.vascn.2017.09.141 – ident: 2201_CR37 – ident: 2201_CR18 doi: 10.1093/nar/gkv951 – ident: 2201_CR32 doi: 10.3174/ajnr.A4696 – ident: 2201_CR39 – volume: 8 start-page: 12 year: 2012 ident: 2201_CR6 publication-title: PLOS Comput Biol doi: 10.1371/journal.pcbi.1002826 contributor: fullname: OPR Payne – ident: 2201_CR31 – volume: 34 start-page: D668 year: 2006 ident: 2201_CR14 publication-title: Nucleic Acids Res doi: 10.1093/nar/gkj067 contributor: fullname: D Wishart – ident: 2201_CR4 doi: 10.1007/978-3-642-23740-9 – volume: 171 start-page: 124 year: 2017 ident: 2201_CR7 publication-title: Talanta doi: 10.1016/j.talanta.2017.04.076 contributor: fullname: H Bai – ident: 2201_CR22 doi: 10.1093/nar/28.1.27 – ident: 2201_CR8 doi: 10.1371/journal.pone.0116656 – ident: 2201_CR27 doi: 10.1093/nar/gkv1075 – volume: 73 start-page: 199 year: 2015 ident: 2201_CR10 publication-title: Knowl Based Syst doi: 10.1016/j.knosys.2014.10.001 contributor: fullname: M Maree – ident: 2201_CR28 – ident: 2201_CR20 – ident: 2201_CR26 – ident: 2201_CR24 – ident: 2201_CR33 doi: 10.1289/txg.6028 |
| SSID | ssj0021524 |
| Score | 2.3392577 |
| Snippet | Biomedical data are complex and heterogeneous. An ample reliable quantity of data is important for understanding and exploring the domain. The work aims to... |
| SourceID | proquest crossref springer |
| SourceType | Aggregation Database Publisher |
| StartPage | 2339 |
| SubjectTerms | Biomedical and Life Sciences Biomedical data Biomedical Engineering and Bioengineering Biomedicine Clinical trials Computer Applications Human Physiology Imaging Knowledge bases (artificial intelligence) Original Article Radiology Statistical analysis |
| SummonAdditionalLinks | – databaseName: SpringerLink Journals (ICM) dbid: U2A link: http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwlV1LT8MwDLZgSIgL4ikKAwWJG1Rq06xNuQ3YtCFtHNik3aKsSY8dYt3_x876EAgOnBu5lev4-xw_AnAXGy4yRD5fWtxNQmCAIq0RPpKJPJXSoEt0Vb7TeDQXr4veou3jdsXudUbSOeq21w2xKfEp2qHmUIyBd2EPyUNEpjzn_SbKQkASTd0i0ueqU-Z3Gd_RqKWYP7KiDmyGR3BYsUTW3_7WY9ixxQnsT6o8-Cm8P43fxtPZZPDyyJqBD4Zte-lJ7aw5K2OEU4yOWxmNKiBXZ9dMF4bVTZHM3dyxPoP5cDB7HvnV9Qh-hrhT-jbsLXmUpZRZs0FshEizpUE6ZoNcJ-i2tAhswmUe8YTmtmmT9-I0tDldrSGRh51Dp1gV9gIYAmWQR0loY4l8hGakZRgaa45ydB5y48F9rSb1sZ2Codp5x6RUhUpVTqkq8KBba1JVO2KtkEZwlB4msQe3zWO0ZUpQ6MKuNrQGvzQVGBt78FD_gVbE32-8_N_yKzjgZASuJq8LnfJzY6-RW5TLG2dLX-6Iwf0 priority: 102 providerName: Springer Nature |
| Title | BIOINTMED: integrated biomedical knowledge base with ontologies and clinical trials |
| URI | https://link.springer.com/article/10.1007/s11517-020-02201-0 https://www.proquest.com/docview/2442688176 https://search.proquest.com/docview/2427294523 |
| Volume | 58 |
| hasFullText | 1 |
| inHoldings | 1 |
| isFullTextHit | |
| isPrint | |
| link | http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwfV1LS8NAEB60BfEiPrFaywreNJhst8nGi7SaPpRW0RbqKaTZzTGtpv3_zuSJgl4SSMJumNmdbx47MwBXtuIiROQzpMbdJAQaKFIrYaAyEblSKhSJ6SnfiT2ciad5Z5473JL8WGUhE1NBrZYh-chvEYa4LaXl2PerT4O6RlF0NW-hsQ11iyMy4Xp25pXBhdgkyiOMqEnnSTNZ6hxCnWOQ8US5pmhS_wSmStv8FSBNcae_D3u5wsi6GYcPYEvHh7AzzkPiR_DeG72MJtOx93jHytoPimVp9cQBVrrNGEEWI88ro6oFJPV0woJYsSI_kqVNPJJjmPW96cPQyDslGCFC0NrQVmfB26FLQTZt2koIN1wo1My0GQUOSrBAmNrhMmpzh0q4BSrq2K6lI-qyIVElO4FavIz1KTDETDNqO5ZGYgubyqWFaCUHHMcJIourBlwXZPJXWUEMvyp9TET1kah-SlTfbECzoKSfb47Er1jZgMvyNS5rilUEsV5u6Bv8U1egmdyAm4ID1RB_z3j2_4znsMuJ6elxvCbU1l8bfYFqxXrRStcOXmV_0IJ6d_Dx7OG9501e3_DpjHe_AReQyq4 |
| link.rule.ids | 315,781,785,12061,12770,21393,27929,27930,31724,31725,33378,33379,33749,33750,41086,41528,42155,42597,43315,43605,43810,52116,52239,73750,74040,74307 |
| linkProvider | ProQuest |
| linkToHtml | http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwfV1LT8MwDLZgk4AL4ikKA4LEDSraLuuDC2KwaYOtINgkblHXpMdu0O3_Y7dpK5Dg3CqJ7MSf3wa4dKXDY0Q-01f4mjhHA8VXkpuoTCSB70sUiXmWb-gOpvzpo_OhHW6ZTqssZWIuqOU8Jh_5DcKQ4_q-7bl3i0-TpkZRdFWP0FiHZt6qqgHNbi98fatMLkQnXiUxoi6ty2aK4jkEO88k84mqTdGo_glNtb75K0SaI09_B7a1ysjuCx7vwppK92BjrIPi-_DeHb4Mw8m493jLqu4PkhWF9cQDVjnOGIEWI98ro74FJPdUxqJUsrJCkuVjPLIDmPZ7k4eBqWclmDGC0NJUdmfmtOOAwmzKciXnQTyTqJspK4k8lGERt5Tn-Enb8aiJWySTjhvYKqE5Gz4qZYfQSOepOgKGqGklbc9WSG7uUsO0GO3kyMF1osR2pAFXJZnEomiJIermx0RUgUQVOVGFZUCrpKTQzyMTNTMNuKg-48WmaEWUqvmK_sGTBhwNZQOuSw7US_y94_H_O57D5mAyHonRMHw-gS2HLkCenNeCxvJrpU5RyVjOzvRN-gYeycoH |
| linkToPdf | http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwfV1LT8MwDLZgSBMXxFMUBgSJG1T0kTUtFwRs0wZsILFJu0Vdkx67Qbf_j92mq0CCc6sksh1_dvwCuAqUxxNEPjvUeJs4Rwcl1IrbaEykURgqVIlFlu8o6E_487Q9NflPuUmrrHRioajVPKE38luEIS8IQ1cEt6lJi3jv9O4XnzZNkKJIqxmnsQlbwkccRNkW09r5Qpzi63RGtKpNAU1ZRoewJ2xypKjuFN3rnyBVW56_gqUFBvV2YccYj-yh5PYebOhsH5pDEx4_gI_HwdtgNB52O3ds3QdCsbLEnrjB1k9ojOCL0Sssow4GpAF1zuJMsapWkhUDPfJDmPS646e-baYm2AnC0dLWbnvm-UlEATftBIrzKJkptNK0k8YCtVnMHS28MPU9Qe3cYpW2g8jVKU3cCNE8O4JGNs_0MTDETyf1hauR8Dyg1mkJesyxh-vEqespC64rMslF2RxD1m2QiagSiSoLokrHglZFSWkuSi5rtlpwuf6MIk5xizjT8xX9gyeNOLrMFtxUHKiX-HvHk_93vIAmipB8HYxeTmHbI_4XWXotaCy_VvoMrY3l7LwQo2878czY |
| openUrl | ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=BIOINTMED%3A+integrated+biomedical+knowledge+base+with+ontologies+and+clinical+trials&rft.jtitle=Medical+%26+biological+engineering+%26+computing&rft.au=Saha+Ankita&rft.au=Mukhopadhyay+Jayanta&rft.au=Sarkar+Sudeshna&rft.au=Gattu+Mahanandeeshwar&rft.date=2020-10-01&rft.pub=Springer+Nature+B.V&rft.issn=0140-0118&rft.eissn=1741-0444&rft.volume=58&rft.issue=10&rft.spage=2339&rft.epage=2354&rft_id=info:doi/10.1007%2Fs11517-020-02201-0&rft.externalDBID=HAS_PDF_LINK |
| thumbnail_l | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/lc.gif&issn=0140-0118&client=summon |
| thumbnail_m | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/mc.gif&issn=0140-0118&client=summon |
| thumbnail_s | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/sc.gif&issn=0140-0118&client=summon |