Genetic relationships of salep orchid species and gene flow among Serapias vomeracea × Anacamptis morio hybrids

Orchids are naturally grown in many countries of the Eastern Mediterranean. Salep, produced from orchid tubers via grinding and used as a hot drink, is an essential ingredient of ice cream. Salep orchid species are in danger of extinction due to the absence of cultivation and over-harvesting from na...

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Published inPlant biotechnology reports Vol. 17; no. 2; pp. 315 - 327
Main Authors Palaz, Esra Bulunuz, Demirel, Fatih, Adali, Sümeyye, Demirel, Serap, Yilmaz, Abdurrahim
Format Journal Article
LanguageEnglish
Published Singapore Springer Nature Singapore 01.04.2023
Springer Nature B.V
한국식물생명공학회
Subjects
Agriculture
Algorithms
Anacamptis morio
Banded structure
Binding sites
Biomedical and Life Sciences
Biotechnology
Cell Biology
Commercial species
Dairy products
extinction
Gene flow
Genetic distance
Genetic diversity
Genetic relationship
genetic variation
Hybrids
Ice cream
ingredients
Life Sciences
multidimensional scaling
Original Article
Plant Biochemistry
Plant Sciences
Polymorphism
Population genetics
Population structure
Populations
retrotransposons
Species extinction
variance
Variance analysis
농학
iPBS, Genetic diversity
Genetic conservation
Crossing
Online AccessGet full text
ISSN1863-5466
1863-5474
DOI10.1007/s11816-022-00782-w

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Abstract Orchids are naturally grown in many countries of the Eastern Mediterranean. Salep, produced from orchid tubers via grinding and used as a hot drink, is an essential ingredient of ice cream. Salep orchid species are in danger of extinction due to the absence of cultivation and over-harvesting from nature. In this study, the genetic diversity and population structure between salep orchid species, their hybrids, and commercial species of Phalenopsis sp. were first investigated using inter-Primer Binding Site (iPBS) Retrotransposon markers. A total of 854 bands were scored with a 100% polymorphism rate. Neighbor-joining, model-based structure, and PCoA (Principal Coordinate Analysis) algorithms clustered the 30 salep orchids into three main populations. The analysis of molecular variance revealed variations within and among the populations as 71% and 29%, respectively. Anacamptis morio and Serapias vomeracea had the furthest genetic distances, and F 1 hybrids of S. vomeracea and A. morio had great genetic diversity. The study results will provide helpful information for orchid breeding by eliciting the genetic distances of salep orchids.
AbstractList Orchids are naturally grown in many countries of the Eastern Mediterranean. Salep, produced from orchid tubers via grinding and used as a hot drink, is an essential ingredient of ice cream. Salep orchid species are in danger of extinction due to the absence of cultivation and over-harvesting from nature. In this study, the genetic diversity and population structure between salep orchid species, their hybrids, and commercial species of Phalenopsis sp. were first investigated using inter-Primer Binding Site (iPBS) Retrotransposon markers. A total of 854 bands were scored with a 100% polymorphism rate. Neighbor-joining, model-based structure, and PCoA (Principal Coordinate Analysis) algorithms clustered the 30 salep orchids into three main populations. The analysis of molecular variance revealed variations within and among the populations as 71% and 29%, respectively. Anacamptis morio and Serapias vomeracea had the furthest genetic distances, and F₁ hybrids of S. vomeracea and A. morio had great genetic diversity. The study results will provide helpful information for orchid breeding by eliciting the genetic distances of salep orchids.
Orchids are naturally grown in many countries of the Eastern Mediterranean. Salep, produced from orchid tubers via grinding and used as a hot drink, is an essential ingredient of ice cream. Salep orchid species are in danger of extinction due to the absence of cultivation and over-harvesting from nature. In this study, the genetic diversity and population structure between salep orchid species, their hybrids, and commercial species of Phalenopsis sp. were first investigated using inter-Primer Binding Site (iPBS) Retrotransposon markers. A total of 854 bands were scored with a 100% polymorphism rate. Neighbor-joining, model-based structure, and PCoA (Principal Coordinate Analysis) algorithms clustered the 30 salep orchids into three main populations. The analysis of molecular variance revealed variations within and among the populations as 71% and 29%, respectively. Anacamptis morio and Serapias vomeracea had the furthest genetic distances, and F1 hybrids of S. vomeracea and A. morio had great genetic diversity. The study results will provide helpful information for orchid breeding by eliciting the genetic distances of salep orchids. KCI Citation Count: 0
Orchids are naturally grown in many countries of the Eastern Mediterranean. Salep, produced from orchid tubers via grinding and used as a hot drink, is an essential ingredient of ice cream. Salep orchid species are in danger of extinction due to the absence of cultivation and over-harvesting from nature. In this study, the genetic diversity and population structure between salep orchid species, their hybrids, and commercial species of Phalenopsis sp. were first investigated using inter-Primer Binding Site (iPBS) Retrotransposon markers. A total of 854 bands were scored with a 100% polymorphism rate. Neighbor-joining, model-based structure, and PCoA (Principal Coordinate Analysis) algorithms clustered the 30 salep orchids into three main populations. The analysis of molecular variance revealed variations within and among the populations as 71% and 29%, respectively. Anacamptis morio and Serapias vomeracea had the furthest genetic distances, and F 1 hybrids of S. vomeracea and A. morio had great genetic diversity. The study results will provide helpful information for orchid breeding by eliciting the genetic distances of salep orchids.
Orchids are naturally grown in many countries of the Eastern Mediterranean. Salep, produced from orchid tubers via grinding and used as a hot drink, is an essential ingredient of ice cream. Salep orchid species are in danger of extinction due to the absence of cultivation and over-harvesting from nature. In this study, the genetic diversity and population structure between salep orchid species, their hybrids, and commercial species of Phalenopsis sp. were first investigated using inter-Primer Binding Site (iPBS) Retrotransposon markers. A total of 854 bands were scored with a 100% polymorphism rate. Neighbor-joining, model-based structure, and PCoA (Principal Coordinate Analysis) algorithms clustered the 30 salep orchids into three main populations. The analysis of molecular variance revealed variations within and among the populations as 71% and 29%, respectively. Anacamptis morio and Serapias vomeracea had the furthest genetic distances, and F1 hybrids of S. vomeracea and A. morio had great genetic diversity. The study results will provide helpful information for orchid breeding by eliciting the genetic distances of salep orchids.
Author Palaz, Esra Bulunuz
Adali, Sümeyye
Demirel, Serap
Demirel, Fatih
Yilmaz, Abdurrahim
Author_xml – sequence: 1
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  organization: Department of Agricultural Biotechnology, Faculty of Agriculture, Iğdır University
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  surname: Adali
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  organization: East Mediterranean Transitional Zone Agricultural Research Institute
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  surname: Yilmaz
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Snippet Orchids are naturally grown in many countries of the Eastern Mediterranean. Salep, produced from orchid tubers via grinding and used as a hot drink, is an...
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SubjectTerms Agriculture
Algorithms
Anacamptis morio
Banded structure
Binding sites
Biomedical and Life Sciences
Biotechnology
Cell Biology
Commercial species
Dairy products
extinction
Gene flow
Genetic distance
Genetic diversity
Genetic relationship
genetic variation
Hybrids
Ice cream
ingredients
Life Sciences
multidimensional scaling
Original Article
Plant Biochemistry
Plant Sciences
Polymorphism
Population genetics
Population structure
Populations
retrotransposons
Species extinction
variance
Variance analysis
농학
Title Genetic relationships of salep orchid species and gene flow among Serapias vomeracea × Anacamptis morio hybrids
URI https://link.springer.com/article/10.1007/s11816-022-00782-w
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Volume 17
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