Filtering for Highly Variable Genes and High-Quality Spots Improves Phylogenetic Analysis of Cancer Spatial Transcriptomics Visium Data - Gavryushkina, Alexandra “Sasha”; Pinkney, Holly R.; Diermeier, Sarah D.; Gavryushkin, Alex (Journal of computational biology, 2025)
Keywords: Computational Biology - methods; Gene Expression Profiling - methods; Humans; Neoplasms - genetics; Phylogeny; Preface; Single-Cell Analysis - methods; Transcriptome - genetics; cell lineages; expression data; RNA-sequencing; single cell; phylogeography of tumor