Linkage Disequilibrium Between TNF-α-308 G/A Promoter and Histocompatibility Leukocyte Antigen Alleles in Han-Nationality Lung Transplant Recipients From Eastern China

Genes encoding histocompatibility leukocyte antigen (HLA) and proinflammatory cytokines are involved in rejection after organ transplant. The authors explored the association between HLA alleles and the tumor necrosis factor (TNF)- α-308 G/A promoter region in lung transplant recipients of Han natio...

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Published inExperimental and clinical transplantation Vol. 11; no. 3; pp. 264 - 269
Main Authors Huijun, Mu, Ji, Zhang, Ping, Xie, Jingyu, Chen, Bin, Zhang
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Published Turkey 01.06.2013
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Abstract Genes encoding histocompatibility leukocyte antigen (HLA) and proinflammatory cytokines are involved in rejection after organ transplant. The authors explored the association between HLA alleles and the tumor necrosis factor (TNF)- α-308 G/A promoter region in lung transplant recipients of Han nationality from East China. They also evaluated the correlation between TNF-α-308 G/A and the onset of acute rejection after lung transplant. All lung transplant recipients of Han nationality who were admitted into our hospital between August 2004 and July 2011 were included. Patients were divided into 2 groups according to the presence or absence of acute rejection episodes. Genotypes of HLA and single nucleotide polymorphisms of TNF-α-308 G/A were determined using polymerase chain reaction-single specific primer kits. A total of 106 lung transplant recipients were investigated. HLA-A*2 allele was in linkage disequilibrium with TNF-α-308 G allele. HLA-A*33, -B*58 and -DRB1*03 alleles were in linkage disequilibrium with TNF-α-308 A allele. Notably, TNF-α-308 A allele was in complete linkage disequilibrium with HLA-B*58 allele. Furthermore, TNF-α-308 A allele was in linkage disequilibrium with the HLA-A*33-DRB1*03 and HLA-B*58-DRB1*03 haplotypes. Clinical analysis indicated that TNF-α-308 G/A was not associated with onset of acute rejection after lung transplant. TNF-α-308 G/A polymorphism was strongly associated with HLA-A*2, -A*33, -B*58, and -DRB1*03 alleles in our population. HLA genotyping can identify lung transplant recipients carrying the highly productive phenotype of TNF-α-308 A allele, which may provide information on rejection after transplant. However, the authors found that TNF-α-308 A subtype has no correlation with acute rejection after lung transplant.
AbstractList Genes encoding histocompatibility leukocyte antigen (HLA) and proinflammatory cytokines are involved in rejection after organ transplant. The authors explored the association between HLA alleles and the tumor necrosis factor (TNF)- α-308 G/A promoter region in lung transplant recipients of Han nationality from East China. They also evaluated the correlation between TNF-α-308 G/A and the onset of acute rejection after lung transplant.OBJECTIVESGenes encoding histocompatibility leukocyte antigen (HLA) and proinflammatory cytokines are involved in rejection after organ transplant. The authors explored the association between HLA alleles and the tumor necrosis factor (TNF)- α-308 G/A promoter region in lung transplant recipients of Han nationality from East China. They also evaluated the correlation between TNF-α-308 G/A and the onset of acute rejection after lung transplant.All lung transplant recipients of Han nationality who were admitted into our hospital between August 2004 and July 2011 were included. Patients were divided into 2 groups according to the presence or absence of acute rejection episodes. Genotypes of HLA and single nucleotide polymorphisms of TNF-α-308 G/A were determined using polymerase chain reaction-single specific primer kits.MATERIALS AND METHODSAll lung transplant recipients of Han nationality who were admitted into our hospital between August 2004 and July 2011 were included. Patients were divided into 2 groups according to the presence or absence of acute rejection episodes. Genotypes of HLA and single nucleotide polymorphisms of TNF-α-308 G/A were determined using polymerase chain reaction-single specific primer kits.A total of 106 lung transplant recipients were investigated. HLA-A*2 allele was in linkage disequilibrium with TNF-α-308 G allele. HLA-A*33, -B*58 and -DRB1*03 alleles were in linkage disequilibrium with TNF-α-308 A allele. Notably, TNF-α-308 A allele was in complete linkage disequilibrium with HLA-B*58 allele. Furthermore, TNF-α-308 A allele was in linkage disequilibrium with the HLA-A*33-DRB1*03 and HLA-B*58-DRB1*03 haplotypes. Clinical analysis indicated that TNF-α-308 G/A was not associated with onset of acute rejection after lung transplant.RESULTSA total of 106 lung transplant recipients were investigated. HLA-A*2 allele was in linkage disequilibrium with TNF-α-308 G allele. HLA-A*33, -B*58 and -DRB1*03 alleles were in linkage disequilibrium with TNF-α-308 A allele. Notably, TNF-α-308 A allele was in complete linkage disequilibrium with HLA-B*58 allele. Furthermore, TNF-α-308 A allele was in linkage disequilibrium with the HLA-A*33-DRB1*03 and HLA-B*58-DRB1*03 haplotypes. Clinical analysis indicated that TNF-α-308 G/A was not associated with onset of acute rejection after lung transplant.TNF-α-308 G/A polymorphism was strongly associated with HLA-A*2, -A*33, -B*58, and -DRB1*03 alleles in our population. HLA genotyping can identify lung transplant recipients carrying the highly productive phenotype of TNF-α-308 A allele, which may provide information on rejection after transplant. However, the authors found that TNF-α-308 A subtype has no correlation with acute rejection after lung transplant.CONCLUSIONSTNF-α-308 G/A polymorphism was strongly associated with HLA-A*2, -A*33, -B*58, and -DRB1*03 alleles in our population. HLA genotyping can identify lung transplant recipients carrying the highly productive phenotype of TNF-α-308 A allele, which may provide information on rejection after transplant. However, the authors found that TNF-α-308 A subtype has no correlation with acute rejection after lung transplant.
Genes encoding histocompatibility leukocyte antigen (HLA) and proinflammatory cytokines are involved in rejection after organ transplant. The authors explored the association between HLA alleles and the tumor necrosis factor (TNF)- α-308 G/A promoter region in lung transplant recipients of Han nationality from East China. They also evaluated the correlation between TNF-α-308 G/A and the onset of acute rejection after lung transplant. All lung transplant recipients of Han nationality who were admitted into our hospital between August 2004 and July 2011 were included. Patients were divided into 2 groups according to the presence or absence of acute rejection episodes. Genotypes of HLA and single nucleotide polymorphisms of TNF-α-308 G/A were determined using polymerase chain reaction-single specific primer kits. A total of 106 lung transplant recipients were investigated. HLA-A*2 allele was in linkage disequilibrium with TNF-α-308 G allele. HLA-A*33, -B*58 and -DRB1*03 alleles were in linkage disequilibrium with TNF-α-308 A allele. Notably, TNF-α-308 A allele was in complete linkage disequilibrium with HLA-B*58 allele. Furthermore, TNF-α-308 A allele was in linkage disequilibrium with the HLA-A*33-DRB1*03 and HLA-B*58-DRB1*03 haplotypes. Clinical analysis indicated that TNF-α-308 G/A was not associated with onset of acute rejection after lung transplant. TNF-α-308 G/A polymorphism was strongly associated with HLA-A*2, -A*33, -B*58, and -DRB1*03 alleles in our population. HLA genotyping can identify lung transplant recipients carrying the highly productive phenotype of TNF-α-308 A allele, which may provide information on rejection after transplant. However, the authors found that TNF-α-308 A subtype has no correlation with acute rejection after lung transplant.
Author Huijun, Mu
Jingyu, Chen
Ping, Xie
Ji, Zhang
Bin, Zhang
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CitedBy_id crossref_primary_10_1177_0333102420902228
crossref_primary_10_1007_s00784_015_1570_9
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Cites_doi 10.1016/j.molimm.2009.01.006
10.1016/j.imlet.2004.05.015
10.1038/nrg2361
10.1146/annurev.me.41.020190.002045
10.1016/S0198-8859(03)00056-9
10.1084/jem.177.2.557
10.1111/j.1399-0039.2010.01623.x
10.1016/S0198-8859(01)00351-2
10.1016/j.transproceed.2005.03.091
10.1111/j.1399-0039.2006.759_6.x
10.1034/j.1399-0039.2002.600602.x
10.1111/j.1365-4632.2010.04465.x
10.1111/j.1399-0039.2007.00817.x
10.1007/s00296-008-0671-z
10.1097/TP.0b013e3181e46a22
10.1038/371508a0
10.1007/s00292-010-1403-1
10.1016/j.pneumo.2010.12.007
10.1016/j.healun.2007.10.017
10.1016/j.athoracsur.2005.07.037
10.1073/pnas.94.7.3195
10.1097/01.TP.0000140884.71571.BC
10.1016/S0198-8859(01)00322-6
10.1371/journal.pone.0011806
10.1034/j.1399-0039.2003.00083.x
10.1016/j.bbmt.2007.05.007
10.1080/03009740510017724
10.1016/S0198-8859(00)00235-4
10.1111/j.1399-0039.2009.01258.x
10.1016/j.healun.2004.02.019
10.1097/01.TP.0000155187.81806.DF
10.1046/j.1365-3156.1999.43381.x
10.1038/sj.gene.6363898
10.1046/j.1365-2249.1998.00662.x
10.1038/sj.gene.6363789
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References ref13
ref35
ref12
ref34
ref15
ref37
ref14
ref31
ref30
ref11
ref33
ref10
ref32
ref2
ref1
ref17
ref16
ref38
ref18
de Vlam (ref39) 2008; 35
ref24
ref23
Omrani (ref36) 2010; 4
ref26
ref25
Pu (ref3) 2009; 40
ref20
ref22
ref21
ref28
ref27
ref29
ref8
ref7
ref9
ref4
ref6
ref5
Medcraft (ref19) 1993; 40
References_xml – ident: ref15
  doi: 10.1016/j.molimm.2009.01.006
– ident: ref24
  doi: 10.1016/j.imlet.2004.05.015
– ident: ref9
  doi: 10.1038/nrg2361
– ident: ref7
  doi: 10.1146/annurev.me.41.020190.002045
– ident: ref23
  doi: 10.1016/S0198-8859(03)00056-9
– ident: ref20
  doi: 10.1084/jem.177.2.557
– ident: ref35
  doi: 10.1111/j.1399-0039.2010.01623.x
– ident: ref28
  doi: 10.1016/S0198-8859(01)00351-2
– ident: ref34
  doi: 10.1016/j.transproceed.2005.03.091
– ident: ref38
  doi: 10.1111/j.1399-0039.2006.759_6.x
– ident: ref22
  doi: 10.1034/j.1399-0039.2002.600602.x
– ident: ref16
  doi: 10.1111/j.1365-4632.2010.04465.x
– ident: ref12
  doi: 10.1111/j.1399-0039.2007.00817.x
– ident: ref13
  doi: 10.1007/s00296-008-0671-z
– ident: ref8
  doi: 10.1097/TP.0b013e3181e46a22
– ident: ref26
  doi: 10.1038/371508a0
– ident: ref1
  doi: 10.1007/s00292-010-1403-1
– ident: ref2
  doi: 10.1016/j.pneumo.2010.12.007
– ident: ref14
  doi: 10.1016/j.healun.2007.10.017
– ident: ref31
  doi: 10.1016/j.athoracsur.2005.07.037
– ident: ref32
  doi: 10.1073/pnas.94.7.3195
– ident: ref33
  doi: 10.1097/01.TP.0000140884.71571.BC
– ident: ref17
  doi: 10.1016/S0198-8859(01)00322-6
– ident: ref11
  doi: 10.1371/journal.pone.0011806
– ident: ref21
  doi: 10.1034/j.1399-0039.2003.00083.x
– volume: 35
  start-page: 1443
  issn: 0315162X
  issue: 7
  year: 2008
  ident: ref39
  article-title: Biological biomarkers in psoriatic disease. A review.
  publication-title: J Rheumatol
– ident: ref37
  doi: 10.1016/j.bbmt.2007.05.007
– ident: ref18
  doi: 10.1080/03009740510017724
– ident: ref5
  doi: 10.1016/S0198-8859(00)00235-4
– volume: 40
  start-page: 77
  issn: 1672173X
  issue: 1
  year: 2009
  ident: ref3
  article-title: Relationship among TNF-alpha gene promoter -308 site polymorphism, the levels of maternal serum TNF-alpha, and the mRNA expression placental TNF-alpha in preterm labor
  publication-title: Sichuan Da Xue Xue Bao Yi Xue Ban
– ident: ref10
  doi: 10.1111/j.1399-0039.2009.01258.x
– ident: ref6
  doi: 10.1016/j.healun.2004.02.019
– volume: 40
  start-page: 63
  issn: 03010430
  issue: 2
  year: 1993
  ident: ref19
  article-title: Autoimmune renal disease and tumour necrosis factor beta gene polymorphism.
  publication-title: Clin Nephrol
– ident: ref4
  doi: 10.1097/01.TP.0000155187.81806.DF
– ident: ref29
  doi: 10.1046/j.1365-3156.1999.43381.x
– ident: ref25
  doi: 10.1038/sj.gene.6363898
– ident: ref30
  doi: 10.1046/j.1365-2249.1998.00662.x
– ident: ref27
  doi: 10.1038/sj.gene.6363789
– volume: 4
  start-page: 141
  issn: 17358582
  issue: 2
  year: 2010
  ident: ref36
  article-title: Association of interleukin-10, interferon-gamma, transforming growth factor-beta, and tumor necrosis factor-alpha gene polymorphisms with long-term kidney allograft survival.
  publication-title: Iran J Kidney Dis
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Snippet Genes encoding histocompatibility leukocyte antigen (HLA) and proinflammatory cytokines are involved in rejection after organ transplant. The authors explored...
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SubjectTerms Acute Disease
Adolescent
Adult
Aged
Asian Continental Ancestry Group - genetics
Chi-Square Distribution
China - epidemiology
Female
Gene Frequency
Genetic Predisposition to Disease
Graft Rejection - ethnology
Graft Rejection - genetics
Graft Rejection - immunology
HLA Antigens - genetics
HLA-A Antigens - genetics
HLA-B Antigens - genetics
HLA-DRB1 Chains - genetics
Humans
Linkage Disequilibrium
Lung Transplantation - adverse effects
Male
Middle Aged
Phenotype
Polymorphism, Single Nucleotide
Promoter Regions, Genetic
Retrospective Studies
Risk Factors
Time Factors
Tumor Necrosis Factor-alpha - genetics
Young Adult
Title Linkage Disequilibrium Between TNF-α-308 G/A Promoter and Histocompatibility Leukocyte Antigen Alleles in Han-Nationality Lung Transplant Recipients From Eastern China
URI https://www.ncbi.nlm.nih.gov/pubmed/23176610
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Volume 11
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