Deep-ABPpred: identifying antibacterial peptides in protein sequences using bidirectional LSTM with word2vec

• Published in: Briefings in bioinformatics Vol. 22; no. 5
• Main Authors: Sharma, Ritesh, Shrivastava, Sameer, Kumar Singh, Sanjay, Kumar, Abhinav, Saxena, Sonal, Kumar Singh, Raj
• Format: Journal Article
• Language: English
• Published: England 02.09.2021
• Subjects: deep learning; Streptococcus; BiLSTM; bacteriophage; AMR; antibacterial peptides

The overuse of antibiotics has led to emergence of antimicrobial resistance, and as a result, antibacterial peptides (ABPs) are receiving significant attention as an alternative. Identification of effective ABPs in lab from natural sources is a cost-intensive and time-consuming process. Therefore, t...