Effect of long-term liquid dairy manure application on activity and structure of bacteria and archaea in no-till soils depends on plant in development

This study aimed to evaluate the impact of long-term liquid dairy manure (LDM) application on the activity and structure of soil bacterial and archaea communities in two cropping seasons over 1 year of a no-till crop rotation system. The experiment was run in a sandy clay loam texture Oxisol, in Bra...

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Published inEnvironmental science and pollution research international Vol. 31; no. 42; pp. 54713 - 54728
Main Authors da Costa Soares, Stallone, Vezzani, Fabiane Machado, Favaretto, Nerilde, Auler, André Carlos, da Silva Coelho, Irene, de Sousa Pires, Araceli, Cruz, Leonardo Magalhães, de Souza, Emanuel Maltempi, Barth, Gabriel
Format Journal Article
LanguageEnglish
Published Berlin/Heidelberg Springer Berlin Heidelberg 01.09.2024
Springer Nature B.V
Subjects
Acidobacteria
Actinobacteria
Agricultural practices
Aquatic Pollution
Archaea
Atmospheric Protection/Air Quality Control/Air Pollution
Autumn
Bacteroidetes
Brazil
Cereal crops
Chemical indicators
Chloroflexi
Clay loam
Community composition
community structure
Crop rotation
dairy manure
DNA sequencing
Earth and Environmental Science
Ecotoxicology
Environment
Environmental Chemistry
Environmental Health
Firmicutes
Gemmatimonadetes
Gene sequencing
genes
liquids
manure spreading
Manures
microbial activity
microbial carbon
microbial communities
Microbiomes
Microorganisms
nitrogen
No-till cropping
no-tillage
Oxisols
plant development
Proteobacteria
Relative abundance
Research Article
rRNA 16S
sandy clay loam soils
Sandy soils
Soil analysis
Soil bacteria
Soil chemistry
Soil microorganisms
Soil sampling
Soil structure
Soils
Spring
Spring (season)
texture
Verrucomicrobia
Waste Water Technology
Water Management
Water Pollution Control
Brazil
Soil functionality
16S rRNA
Organic waste
Soil tillage
Crop rotation
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Abstract This study aimed to evaluate the impact of long-term liquid dairy manure (LDM) application on the activity and structure of soil bacterial and archaea communities in two cropping seasons over 1 year of a no-till crop rotation system. The experiment was run in a sandy clay loam texture Oxisol, in Brazil, including LDM doses of 60, 120, and 180 m 3  ha −1  year −1 , installed in 2005. Soil sampling was conducted during spring 2018 and autumn 2019 at 0–10-cm depth. Microbial biomass carbon and nitrogen, 16S rRNA gene sequencing, microbial respiration and quotient were performed. Over the 14-year period, LDM application increased soil microbial community activity. Analysis of 16S rRNA gene sequencing revealed dominance by Proteobacteria, Acidobacteria, and Actinobacteria phyla (67% in spring and 70% in autumn). Genera Pirulla and Nitrososphaera showed enrichment at LDM doses of 120 and 180 m 3  ha −1  year −1 doses, respectively. During spring, following black oat cropping, shifts in the relative abundance of Bacteroidetes, Proteobacteria, Firmicutes, Gemmatimonadetes, Verrucomicrobia, Chloroflexi, Actinobacteria, and AD3 phyla were observed due to LDM application, correlating with soil chemical indicators such as pH, K, Ca, Mn, and Zn. Our findings indicate that plant development strongly influences microbial community composition, potentially outweighing the impact of LDM. Our findings indicate that the application of liquid dairy manure alters the soil bacterial activity and community; however, this effect depends on the developing plant.
AbstractList This study aimed to evaluate the impact of long-term liquid dairy manure (LDM) application on the activity and structure of soil bacterial and archaea communities in two cropping seasons over 1 year of a no-till crop rotation system. The experiment was run in a sandy clay loam texture Oxisol, in Brazil, including LDM doses of 60, 120, and 180 m  ha  year , installed in 2005. Soil sampling was conducted during spring 2018 and autumn 2019 at 0-10-cm depth. Microbial biomass carbon and nitrogen, 16S rRNA gene sequencing, microbial respiration and quotient were performed. Over the 14-year period, LDM application increased soil microbial community activity. Analysis of 16S rRNA gene sequencing revealed dominance by Proteobacteria, Acidobacteria, and Actinobacteria phyla (67% in spring and 70% in autumn). Genera Pirulla and Nitrososphaera showed enrichment at LDM doses of 120 and 180 m  ha  year doses, respectively. During spring, following black oat cropping, shifts in the relative abundance of Bacteroidetes, Proteobacteria, Firmicutes, Gemmatimonadetes, Verrucomicrobia, Chloroflexi, Actinobacteria, and AD3 phyla were observed due to LDM application, correlating with soil chemical indicators such as pH, K, Ca, Mn, and Zn. Our findings indicate that plant development strongly influences microbial community composition, potentially outweighing the impact of LDM. Our findings indicate that the application of liquid dairy manure alters the soil bacterial activity and community; however, this effect depends on the developing plant.
This study aimed to evaluate the impact of long-term liquid dairy manure (LDM) application on the activity and structure of soil bacterial and archaea communities in two cropping seasons over 1 year of a no-till crop rotation system. The experiment was run in a sandy clay loam texture Oxisol, in Brazil, including LDM doses of 60, 120, and 180 m3 ha−1 year−1, installed in 2005. Soil sampling was conducted during spring 2018 and autumn 2019 at 0–10-cm depth. Microbial biomass carbon and nitrogen, 16S rRNA gene sequencing, microbial respiration and quotient were performed. Over the 14-year period, LDM application increased soil microbial community activity. Analysis of 16S rRNA gene sequencing revealed dominance by Proteobacteria, Acidobacteria, and Actinobacteria phyla (67% in spring and 70% in autumn). Genera Pirulla and Nitrososphaera showed enrichment at LDM doses of 120 and 180 m3 ha−1 year−1 doses, respectively. During spring, following black oat cropping, shifts in the relative abundance of Bacteroidetes, Proteobacteria, Firmicutes, Gemmatimonadetes, Verrucomicrobia, Chloroflexi, Actinobacteria, and AD3 phyla were observed due to LDM application, correlating with soil chemical indicators such as pH, K, Ca, Mn, and Zn. Our findings indicate that plant development strongly influences microbial community composition, potentially outweighing the impact of LDM. Our findings indicate that the application of liquid dairy manure alters the soil bacterial activity and community; however, this effect depends on the developing plant.
This study aimed to evaluate the impact of long-term liquid dairy manure (LDM) application on the activity and structure of soil bacterial and archaea communities in two cropping seasons over 1 year of a no-till crop rotation system. The experiment was run in a sandy clay loam texture Oxisol, in Brazil, including LDM doses of 60, 120, and 180 m3 ha-1 year-1, installed in 2005. Soil sampling was conducted during spring 2018 and autumn 2019 at 0-10-cm depth. Microbial biomass carbon and nitrogen, 16S rRNA gene sequencing, microbial respiration and quotient were performed. Over the 14-year period, LDM application increased soil microbial community activity. Analysis of 16S rRNA gene sequencing revealed dominance by Proteobacteria, Acidobacteria, and Actinobacteria phyla (67% in spring and 70% in autumn). Genera Pirulla and Nitrososphaera showed enrichment at LDM doses of 120 and 180 m3 ha-1 year-1 doses, respectively. During spring, following black oat cropping, shifts in the relative abundance of Bacteroidetes, Proteobacteria, Firmicutes, Gemmatimonadetes, Verrucomicrobia, Chloroflexi, Actinobacteria, and AD3 phyla were observed due to LDM application, correlating with soil chemical indicators such as pH, K, Ca, Mn, and Zn. Our findings indicate that plant development strongly influences microbial community composition, potentially outweighing the impact of LDM. Our findings indicate that the application of liquid dairy manure alters the soil bacterial activity and community; however, this effect depends on the developing plant.This study aimed to evaluate the impact of long-term liquid dairy manure (LDM) application on the activity and structure of soil bacterial and archaea communities in two cropping seasons over 1 year of a no-till crop rotation system. The experiment was run in a sandy clay loam texture Oxisol, in Brazil, including LDM doses of 60, 120, and 180 m3 ha-1 year-1, installed in 2005. Soil sampling was conducted during spring 2018 and autumn 2019 at 0-10-cm depth. Microbial biomass carbon and nitrogen, 16S rRNA gene sequencing, microbial respiration and quotient were performed. Over the 14-year period, LDM application increased soil microbial community activity. Analysis of 16S rRNA gene sequencing revealed dominance by Proteobacteria, Acidobacteria, and Actinobacteria phyla (67% in spring and 70% in autumn). Genera Pirulla and Nitrososphaera showed enrichment at LDM doses of 120 and 180 m3 ha-1 year-1 doses, respectively. During spring, following black oat cropping, shifts in the relative abundance of Bacteroidetes, Proteobacteria, Firmicutes, Gemmatimonadetes, Verrucomicrobia, Chloroflexi, Actinobacteria, and AD3 phyla were observed due to LDM application, correlating with soil chemical indicators such as pH, K, Ca, Mn, and Zn. Our findings indicate that plant development strongly influences microbial community composition, potentially outweighing the impact of LDM. Our findings indicate that the application of liquid dairy manure alters the soil bacterial activity and community; however, this effect depends on the developing plant.
This study aimed to evaluate the impact of long-term liquid dairy manure (LDM) application on the activity and structure of soil bacterial and archaea communities in two cropping seasons over 1 year of a no-till crop rotation system. The experiment was run in a sandy clay loam texture Oxisol, in Brazil, including LDM doses of 60, 120, and 180 m 3  ha −1  year −1 , installed in 2005. Soil sampling was conducted during spring 2018 and autumn 2019 at 0–10-cm depth. Microbial biomass carbon and nitrogen, 16S rRNA gene sequencing, microbial respiration and quotient were performed. Over the 14-year period, LDM application increased soil microbial community activity. Analysis of 16S rRNA gene sequencing revealed dominance by Proteobacteria, Acidobacteria, and Actinobacteria phyla (67% in spring and 70% in autumn). Genera Pirulla and Nitrososphaera showed enrichment at LDM doses of 120 and 180 m 3  ha −1  year −1 doses, respectively. During spring, following black oat cropping, shifts in the relative abundance of Bacteroidetes, Proteobacteria, Firmicutes, Gemmatimonadetes, Verrucomicrobia, Chloroflexi, Actinobacteria, and AD3 phyla were observed due to LDM application, correlating with soil chemical indicators such as pH, K, Ca, Mn, and Zn. Our findings indicate that plant development strongly influences microbial community composition, potentially outweighing the impact of LDM. Our findings indicate that the application of liquid dairy manure alters the soil bacterial activity and community; however, this effect depends on the developing plant.
This study aimed to evaluate the impact of long-term liquid dairy manure (LDM) application on the activity and structure of soil bacterial and archaea communities in two cropping seasons over 1 year of a no-till crop rotation system. The experiment was run in a sandy clay loam texture Oxisol, in Brazil, including LDM doses of 60, 120, and 180 m³ ha⁻¹ year⁻¹, installed in 2005. Soil sampling was conducted during spring 2018 and autumn 2019 at 0–10-cm depth. Microbial biomass carbon and nitrogen, 16S rRNA gene sequencing, microbial respiration and quotient were performed. Over the 14-year period, LDM application increased soil microbial community activity. Analysis of 16S rRNA gene sequencing revealed dominance by Proteobacteria, Acidobacteria, and Actinobacteria phyla (67% in spring and 70% in autumn). Genera Pirulla and Nitrososphaera showed enrichment at LDM doses of 120 and 180 m³ ha⁻¹ year⁻¹ doses, respectively. During spring, following black oat cropping, shifts in the relative abundance of Bacteroidetes, Proteobacteria, Firmicutes, Gemmatimonadetes, Verrucomicrobia, Chloroflexi, Actinobacteria, and AD3 phyla were observed due to LDM application, correlating with soil chemical indicators such as pH, K, Ca, Mn, and Zn. Our findings indicate that plant development strongly influences microbial community composition, potentially outweighing the impact of LDM. Our findings indicate that the application of liquid dairy manure alters the soil bacterial activity and community; however, this effect depends on the developing plant.
Author da Costa Soares, Stallone
da Silva Coelho, Irene
Barth, Gabriel
Favaretto, Nerilde
Cruz, Leonardo Magalhães
Auler, André Carlos
de Souza, Emanuel Maltempi
Vezzani, Fabiane Machado
de Sousa Pires, Araceli
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  surname: da Costa Soares
  fullname: da Costa Soares, Stallone
  email: stallonesoares@hotmail.com, soaresstallone@gmail.com
  organization: UFRRJ - Federal Rural University of Rio de Janeiro, Dpto. de Microbiologia e Imunologia Veterinária/Instituto de Veterinária, Universidade Federal Rural Do Rio de Janeiro
– sequence: 2
  givenname: Fabiane Machado
  surname: Vezzani
  fullname: Vezzani, Fabiane Machado
  organization: DSEA-UFPR - Department of Soil Science and Agricultural Engineering, Federal University of Parana
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  givenname: Nerilde
  surname: Favaretto
  fullname: Favaretto, Nerilde
  organization: DSEA-UFPR - Department of Soil Science and Agricultural Engineering, Federal University of Parana
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  fullname: Auler, André Carlos
  organization: DSEA-UFPR - Department of Soil Science and Agricultural Engineering, Federal University of Parana
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  fullname: da Silva Coelho, Irene
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  organization: BSC-UFPR - Biological Sciences Sector, Federal University of Parana
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  surname: Cruz
  fullname: Cruz, Leonardo Magalhães
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BackLink https://www.ncbi.nlm.nih.gov/pubmed/39210225$$D View this record in MEDLINE/PubMed
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Copyright_xml – notice: The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature 2024. Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law.
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0944-1344
IngestDate Thu Jul 10 18:11:38 EDT 2025
Fri Jul 11 06:02:54 EDT 2025
Fri Jul 25 20:50:54 EDT 2025
Mon Jul 21 06:05:16 EDT 2025
Tue Jul 01 03:33:48 EDT 2025
Fri Feb 21 02:38:31 EST 2025
IsPeerReviewed true
IsScholarly true
Issue 42
Keywords Soil functionality
16S rRNA
Organic waste
Soil tillage
Crop rotation
Language English
License 2024. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.
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Snippet This study aimed to evaluate the impact of long-term liquid dairy manure (LDM) application on the activity and structure of soil bacterial and archaea...
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SubjectTerms Acidobacteria
Actinobacteria
Agricultural practices
Aquatic Pollution
Archaea
Atmospheric Protection/Air Quality Control/Air Pollution
Autumn
Bacteroidetes
Brazil
Cereal crops
Chemical indicators
Chloroflexi
Clay loam
Community composition
community structure
Crop rotation
dairy manure
DNA sequencing
Earth and Environmental Science
Ecotoxicology
Environment
Environmental Chemistry
Environmental Health
Firmicutes
Gemmatimonadetes
Gene sequencing
genes
liquids
manure spreading
Manures
microbial activity
microbial carbon
microbial communities
Microbiomes
Microorganisms
nitrogen
No-till cropping
no-tillage
Oxisols
plant development
Proteobacteria
Relative abundance
Research Article
rRNA 16S
sandy clay loam soils
Sandy soils
Soil analysis
Soil bacteria
Soil chemistry
Soil microorganisms
Soil sampling
Soil structure
Soils
Spring
Spring (season)
texture
Verrucomicrobia
Waste Water Technology
Water Management
Water Pollution Control
Title Effect of long-term liquid dairy manure application on activity and structure of bacteria and archaea in no-till soils depends on plant in development
URI https://link.springer.com/article/10.1007/s11356-024-34762-0
https://www.ncbi.nlm.nih.gov/pubmed/39210225
https://www.proquest.com/docview/3106898824
https://www.proquest.com/docview/3099800621
https://www.proquest.com/docview/3153760963
Volume 31
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