Microbial Community Composition as Affected by Dryland Cropping Systems and Tillage in a Semiarid Sandy Soil

This study evaluated microbial communities of soil (0–10 cm) as affected by dryland cropping systems under different tillage practices after 5 years. The soil type was an Olton sandy loam with an average of 16.4% clay, 67.6% sand and 0.65 g kg−1 of organic matter (OM). The cropping systems evaluated...

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Published inDiversity (Basel) Vol. 2; no. 6; pp. 910 - 931
Main Authors Acosta-Martínez, Verónica, Dowd, Scot E., Bell, Colin W., Lascano, Robert, Booker, Jill D., Zobeck, Ted M., Upchurch, Dan R.
Format Journal Article
LanguageEnglish
Published Basel MDPI AG 01.06.2010
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Abstract This study evaluated microbial communities of soil (0–10 cm) as affected by dryland cropping systems under different tillage practices after 5 years. The soil type was an Olton sandy loam with an average of 16.4% clay, 67.6% sand and 0.65 g kg−1 of organic matter (OM). The cropping systems evaluated were grain sorghum (Sorghum bicolor L.)—cotton (Gossypium hirsutum) (Srg-Ct), cotton-winter rye (Secale cereale)-grain sorghum (Ct-Rye-Srg), and a rotation of forage (f) sorghum (Sorghum bicolor L. and Sorghum sudanense) with winter rye (Srf-Rye), which were under no-tillage (nt) and conventional tillage (ct) practices. Soil microbial communities under cotton based cropping systems (Srg-Ct and Ct-Rye-Srg) showed lower fungal:bacterial ratios compared to the soil under Srf-Rye. Soil under Srf-Rye showed higher population densities of Bacteroidetes and Proteobacteria while lower Actinobacteria compared to Srg-Ct and Ct-Rye-Srg. Chloroflexi, Gemmatimonadetes and Verrucomicrobiae were higher in tilled soil compared to the no-tilled plots. Regardless the limited irrigation available to sustain agricultural production within these dryland cropping systems, this study demonstrated that differences in microbial communities are more affected by crop rotation than tillage management history. Although soil fungal diversity was not analyzed in this study, pyrosequencing suggests that tillage practices can affect bacterial phyla distribution in this sandy soil.
AbstractList This study evaluated microbial communities of soil (0–10 cm) as affected by dryland cropping systems under different tillage practices after 5 years. The soil type was an Olton sandy loam with an average of 16.4% clay, 67.6% sand and 0.65 g kg−1 of organic matter (OM). The cropping systems evaluated were grain sorghum (Sorghum bicolor L.)—cotton (Gossypium hirsutum) (Srg-Ct), cotton-winter rye (Secale cereale)-grain sorghum (Ct-Rye-Srg), and a rotation of forage (f) sorghum (Sorghum bicolor L. and Sorghum sudanense) with winter rye (Srf-Rye), which were under no-tillage (nt) and conventional tillage (ct) practices. Soil microbial communities under cotton based cropping systems (Srg-Ct and Ct-Rye-Srg) showed lower fungal:bacterial ratios compared to the soil under Srf-Rye. Soil under Srf-Rye showed higher population densities of Bacteroidetes and Proteobacteria while lower Actinobacteria compared to Srg-Ct and Ct-Rye-Srg. Chloroflexi, Gemmatimonadetes and Verrucomicrobiae were higher in tilled soil compared to the no-tilled plots. Regardless the limited irrigation available to sustain agricultural production within these dryland cropping systems, this study demonstrated that differences in microbial communities are more affected by crop rotation than tillage management history. Although soil fungal diversity was not analyzed in this study, pyrosequencing suggests that tillage practices can affect bacterial phyla distribution in this sandy soil.
This study evaluated microbial communities of soil (0-10 cm) as affected by dryland cropping systems under different tillage practices after 5 years. The soil type was an Olton sandy loam with an average of 16.4% clay, 67.6% sand and 0.65 g kg-1 of organic matter (OM). The cropping systems evaluated were grain sorghum (Sorghum bicolor L.)-cotton (Gossypium hirsutum) (Srg-Ct), cotton-winter rye (Secale cereale)-grain sorghum (Ct-Rye-Srg), and a rotation of forage (f) sorghum (Sorghum bicolor L. and Sorghum sudanense) with winter rye (Srf-Rye), which were under no-tillage (nt) and conventional tillage (ct) practices. Soil microbial communities under cotton based cropping systems (Srg-Ct and Ct-Rye-Srg) showed lower fungal:bacterial ratios compared to the soil under Srf-Rye. Soil under Srf-Rye showed higher population densities of Bacteroidetes and Proteobacteria while lower Actinobacteria compared to Srg-Ct and Ct-Rye-Srg. Chloroflexi, Gemmatimonadetes and Verrucomicrobiae were higher in tilled soil compared to the no-tilled plots. Regardless the limited irrigation available to sustain agricultural production within these dryland cropping systems, this study demonstrated that differences in microbial communities are more affected by crop rotation than tillage management history. Although soil fungal diversity was not analyzed in this study, pyrosequencing suggests that tillage practices can affect bacterial phyla distribution in this sandy soil.
Author Booker, Jill D.
Lascano, Robert
Zobeck, Ted M.
Upchurch, Dan R.
Dowd, Scot E.
Bell, Colin W.
Acosta-Martínez, Verónica
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Cites_doi 10.2136/sssaj1997.03615995006100020015x
10.1016/j.soilbio.2007.06.027
10.1186/gb-2007-8-7-r143
10.1016/j.femsec.2005.01.008
10.1038/ismej.2008.55
10.2134/agronj2005.0556
10.1007/s00374-011-0565-1
10.1016/S0038-0717(01)00231-0
10.1016/j.agee.2010.02.008
10.1016/j.soilbio.2008.07.022
10.1089/fpd.2008.0107
10.1007/BF00382522
10.1128/aem.62.6.1998-2005.1996
10.1016/j.soilbio.2008.07.030
10.2136/sssaj2005.0160
10.1016/S0038-0717(01)00151-1
10.1016/j.copbio.2008.10.010
10.2136/sssabookser5.2
10.1128/AEM.72.3.1719-1728.2006
10.1038/ismej.2007.53
10.1007/BF00055828
10.1002/0471725315
10.1111/j.0006-341X.2002.00531.x
10.1016/j.agee.2007.08.006
10.1093/nar/29.1.173
10.1016/S0045-6535(97)00155-0
10.1186/1471-2105-6-93
10.2136/sssaj2000.6451659x
10.1111/j.1574-6941.1999.tb00621.x
10.1016/S0038-0717(00)00034-1
10.1016/S0022-2836(05)80360-2
10.1079/RAF2005124
10.1007/s00374-007-0251-5
10.1016/0038-0717(87)90052-6
10.1093/nar/gkh340
10.1186/1471-2180-8-43
10.1016/j.apsoil.2007.03.009
10.1080/00103628809367953
10.1093/nar/gkl889
10.1016/S0038-0717(02)00033-0
10.1016/S0038-0717(03)00240-2
10.1093/nar/gkm541
10.1007/BF00384433
10.1016/j.geoderma.2004.12.042
10.1007/s00374-004-0745-3
10.1016/j.apsoil.2010.01.005
10.1128/AEM.71.3.1501-1506.2005
10.1016/0038-0717(85)90144-0
10.1038/ismej.2009.43
10.2134/jeq1997.00472425002600020022x
10.1890/05-1839
10.1094/PHYTO-96-0068
10.1128/AEM.00335-09
10.1016/0038-0717(90)90046-3
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References Dowd (ref_24) 2008; 8
Cole (ref_37) 2007; 35
Frostegard (ref_15) 1996; 22
Bell (ref_2) 2010; 137
Madan (ref_11) 2002; 34
ref_12
Altschul (ref_35) 1990; 215
Maidak (ref_36) 2001; 29
Roesch (ref_20) 2007; 1
McGreehan (ref_26) 1988; 19
Olsson (ref_10) 1999; 29
Liebig (ref_45) 2006; 21
ref_16
Brookes (ref_28) 1985; 17
Dwarkin (ref_48) 2006; volume 5
Cardenas (ref_21) 2008; 19
Chao (ref_43) 2002; 58
Janssen (ref_56) 2006; 72
Vance (ref_29) 1987; 19
Rowland (ref_3) 2008; 44
Parham (ref_33) 2000; 32
Upchurch (ref_6) 2004; 40
Lauber (ref_64) 2009; 15
ref_27
Dowd (ref_25) 2008; 5
Spain (ref_63) 2009; 3
Allen (ref_60) 2008; 124
Dinamarca (ref_57) 2007; 10
Allen (ref_59) 2005; 97
Larkin (ref_61) 2003; 35
Bailey (ref_1) 2002; 34
Dowd (ref_34) 2005; 6
Mikha (ref_54) 2007; 37
Wu (ref_30) 1990; 22
Zelles (ref_4) 1997; 35
ref_32
ref_31
Jangid (ref_51) 2008; 40
Ringelberg (ref_9) 1997; 26
Dowd (ref_22) 2008; 40
Zak (ref_7) 1996; 5
ref_39
Larkin (ref_62) 2006; 96
Weiss (ref_49) 1996; 62
Upchurch (ref_55) 2008; 40
Schutter (ref_5) 2000; 64
Huse (ref_18) 2007; 8
Liebner (ref_58) 2008; 11
Zogg (ref_8) 1997; 61
Dowd (ref_23) 2010; 45
ref_46
Schloss (ref_41) 2005; 71
Edgar (ref_38) 2004; 32
ref_44
ref_42
ref_40
Abell (ref_50) 2005; 53
Roldan (ref_52) 2005; 129
Liu (ref_19) 2007; 35
Fierer (ref_47) 2007; 88
Ruess (ref_13) 2002; 34
Fulthorpe (ref_17) 2008; 2
Bardgett (ref_14) 1996; 22
Kennedy (ref_53) 2006; 70
References_xml – volume: 61
  start-page: 475
  year: 1997
  ident: ref_8
  article-title: Compositional and functional shifts in microbial communities due to soil warming
  publication-title: Soil Sci. Soc. Am. J.
  doi: 10.2136/sssaj1997.03615995006100020015x
  contributor:
    fullname: Zogg
– volume: 40
  start-page: 1294
  year: 2008
  ident: ref_55
  article-title: Differences in the composition and diversity of bacterial communities from agricultural and forest soils
  publication-title: Soil Biol. Biochem.
  doi: 10.1016/j.soilbio.2007.06.027
  contributor:
    fullname: Upchurch
– volume: 8
  start-page: R143
  year: 2007
  ident: ref_18
  article-title: Accuracy and quality of massively parallel DNA pyrosequencing
  publication-title: Genom. Biol.
  doi: 10.1186/gb-2007-8-7-r143
  contributor:
    fullname: Huse
– volume: 53
  start-page: 379
  year: 2005
  ident: ref_50
  article-title: Colonization and community dynamics of class Flavobacteria on diatom detritus in experimental mesocosms based on Southern Ocean seawater
  publication-title: FEMS Microbiol. Ecol.
  doi: 10.1016/j.femsec.2005.01.008
  contributor:
    fullname: Abell
– volume: 2
  start-page: 901
  year: 2008
  ident: ref_17
  article-title: Distantly sampled soils carry few species in common
  publication-title: ISME J.
  doi: 10.1038/ismej.2008.55
  contributor:
    fullname: Fulthorpe
– volume: 97
  start-page: 556
  year: 2005
  ident: ref_59
  article-title: Integrating cotton and beef production to reduce water withdrawal from the Ogallala aquifer in the Southern High Plains
  publication-title: Agron. J.
  doi: 10.2134/agronj2005.0556
  contributor:
    fullname: Allen
– ident: ref_16
– ident: ref_39
– ident: ref_44
  doi: 10.1007/s00374-011-0565-1
– volume: 34
  start-page: 745
  year: 2002
  ident: ref_13
  article-title: Fatty acids of fungi and nematodes-possible biomarkers in the soil food chain?
  publication-title: Soil Biol. Biochem.
  doi: 10.1016/S0038-0717(01)00231-0
  contributor:
    fullname: Ruess
– volume: 137
  start-page: 231
  year: 2010
  ident: ref_2
  article-title: Long-term soil microbial community and enzyme activity responses to an integrated cropping-livestock system in a semi-arid region
  publication-title: Agric. Ecosys. Environ.
  doi: 10.1016/j.agee.2010.02.008
  contributor:
    fullname: Bell
– volume: 40
  start-page: 2762
  year: 2008
  ident: ref_22
  article-title: Tag-encoded pyrosequencing analysis of bacterial diversity in a single soil type as affected by management and land use
  publication-title: Soil Biol. Biochem.
  doi: 10.1016/j.soilbio.2008.07.022
  contributor:
    fullname: Dowd
– volume: 5
  start-page: 459
  year: 2008
  ident: ref_25
  article-title: Bacterial tag-encoded FLX amplicon pyrosequencing (bTEFAP) for microbiome studies: bacterial diversity in the ileum of newly weaned Salmonella-infected pigs
  publication-title: Foodbor. Path. Dis.
  doi: 10.1089/fpd.2008.0107
  contributor:
    fullname: Dowd
– volume: 22
  start-page: 261
  year: 1996
  ident: ref_14
  article-title: Changes in soil fungal: bacterial biomass ratios following reductions in the intensity of management of an upland grassland
  publication-title: Biol. Fertil. Soils
  doi: 10.1007/BF00382522
  contributor:
    fullname: Bardgett
– volume: 11
  start-page: 195
  year: 2008
  ident: ref_58
  article-title: Bacterial diversity and community structurein polygonal tundra soils from Samoylov Island, Lena Delta, Siberia
  publication-title: Int. Microbiol.
  contributor:
    fullname: Liebner
– volume: 62
  start-page: 1998
  year: 1996
  ident: ref_49
  article-title: Identification in situ and dynamics of bacteria on limnetic organic aggregates (Lake Snow)
  publication-title: Appl. Environ. Microbiol.
  doi: 10.1128/aem.62.6.1998-2005.1996
  contributor:
    fullname: Weiss
– volume: 40
  start-page: 2843
  year: 2008
  ident: ref_51
  article-title: Relative impacts of land-use, management intensity and fertilization upon soil microbial community structure in agricultural systems
  publication-title: Soil Biol. Biochem.
  doi: 10.1016/j.soilbio.2008.07.030
  contributor:
    fullname: Jangid
– volume: 70
  start-page: 940
  year: 2006
  ident: ref_53
  article-title: Soil quality and water intake in traditional-till vs. no-till Paired farms in Washington's Palouse region
  publication-title: Soil Sci.Soc. Am. J.
  doi: 10.2136/sssaj2005.0160
  contributor:
    fullname: Kennedy
– volume: 34
  start-page: 125
  year: 2002
  ident: ref_11
  article-title: Use of fatty acids for identification of AM fungi and estimation of AM spores in soil
  publication-title: Soil Biol. Biochem.
  doi: 10.1016/S0038-0717(01)00151-1
  contributor:
    fullname: Madan
– volume: 19
  start-page: 544
  year: 2008
  ident: ref_21
  article-title: New tools for discovering and characterizing microbial diversity
  publication-title: Curr. Opin.Biotech.
  doi: 10.1016/j.copbio.2008.10.010
  contributor:
    fullname: Cardenas
– ident: ref_32
  doi: 10.2136/sssabookser5.2
– volume: 72
  start-page: 1719
  year: 2006
  ident: ref_56
  article-title: Identifying the dominant soil bacteria taxa in libraries of 16S rRNA and 16S rRNA genes
  publication-title: Appl. Environ. Microbiol.
  doi: 10.1128/AEM.72.3.1719-1728.2006
  contributor:
    fullname: Janssen
– volume: 1
  start-page: 283
  year: 2007
  ident: ref_20
  article-title: Pyrosequencing enumerates and contrasts soil microbial diversity
  publication-title: ISME J.
  doi: 10.1038/ismej.2007.53
  contributor:
    fullname: Roesch
– ident: ref_31
– ident: ref_27
– volume: volume 5
  start-page: 3
  year: 2006
  ident: ref_48
  article-title: Introduction to the proteobacteria
  publication-title: The Prokaryotes
  contributor:
    fullname: Dwarkin
– volume: 10
  start-page: 209
  year: 2007
  ident: ref_57
  article-title: Analysis of striazine-degrading microbial communities in soils using most-probable-number enumeration and tetrazolium salt detection
  publication-title: Intern. Microbiol.
  contributor:
    fullname: Dinamarca
– volume: 5
  start-page: 169
  year: 1996
  ident: ref_7
  article-title: An appraisal of soil fungal biodiversity: the crossroads between taxonomic and functional biodiversity
  publication-title: Biodiv. Conser.
  doi: 10.1007/BF00055828
  contributor:
    fullname: Zak
– ident: ref_42
  doi: 10.1002/0471725315
– volume: 58
  start-page: 531
  year: 2002
  ident: ref_43
  article-title: Estimating the number of species in a stochastic abundance model
  publication-title: Biometrics
  doi: 10.1111/j.0006-341X.2002.00531.x
  contributor:
    fullname: Chao
– volume: 124
  start-page: 3
  year: 2008
  ident: ref_60
  article-title: In search of sustainable agricultural systems for the Llano Estacado of the U.S. Southern High Plains
  publication-title: Agr. Ecosyst. Environ.
  doi: 10.1016/j.agee.2007.08.006
  contributor:
    fullname: Allen
– volume: 29
  start-page: 173
  year: 2001
  ident: ref_36
  article-title: The RDP-II (Ribosomal Database Project)
  publication-title: Nucl. Acids Res.
  doi: 10.1093/nar/29.1.173
  contributor:
    fullname: Maidak
– volume: 35
  start-page: 275
  year: 1997
  ident: ref_4
  article-title: Phospholipid fatty acid profiles in selected members of soil microbial communities
  publication-title: Chemosphere
  doi: 10.1016/S0045-6535(97)00155-0
  contributor:
    fullname: Zelles
– volume: 6
  start-page: 93
  year: 2005
  ident: ref_34
  article-title: Windows.NET network distributed basic local alignment search toolkit (W.ND-BLAST)
  publication-title: BMC Bioinform.
  doi: 10.1186/1471-2105-6-93
  contributor:
    fullname: Dowd
– volume: 64
  start-page: 1659
  year: 2000
  ident: ref_5
  article-title: Comparison of fatty acid methyl ester (FAME) methods for characterizing microbial communities
  publication-title: Soil Sci. Soc. Am. J.
  doi: 10.2136/sssaj2000.6451659x
  contributor:
    fullname: Schutter
– volume: 29
  start-page: 303
  year: 1999
  ident: ref_10
  article-title: Signature fatty acids provide tools for determination of the distribution and interactions of mycorrhizal fungi in soil
  publication-title: FEMS Micro. Ecol.
  doi: 10.1111/j.1574-6941.1999.tb00621.x
  contributor:
    fullname: Olsson
– volume: 32
  start-page: 1183
  year: 2000
  ident: ref_33
  article-title: Detection, quantification and characterization of β-glucosaminidase activity in soil
  publication-title: Soil Biol. Biochem.
  doi: 10.1016/S0038-0717(00)00034-1
  contributor:
    fullname: Parham
– volume: 215
  start-page: 403
  year: 1990
  ident: ref_35
  article-title: Basic local alignment search tool
  publication-title: J. Mol.Biol.
  doi: 10.1016/S0022-2836(05)80360-2
  contributor:
    fullname: Altschul
– volume: 21
  start-page: 36
  year: 2006
  ident: ref_45
  article-title: Cropping system effects on the soil biological characteristics in the Great Plains
  publication-title: Renew. Agric. Food Sys.
  doi: 10.1079/RAF2005124
  contributor:
    fullname: Liebig
– volume: 44
  start-page: 681
  year: 2008
  ident: ref_3
  article-title: Microbial community structure and functionality under peanut-based cropping systems in a sandy soil
  publication-title: Biol. Fertil. Soils
  doi: 10.1007/s00374-007-0251-5
  contributor:
    fullname: Rowland
– volume: 19
  start-page: 703
  year: 1987
  ident: ref_29
  article-title: An extraction method for measuring microbial biomass C
  publication-title: Soil Biol. Biochem.
  doi: 10.1016/0038-0717(87)90052-6
  contributor:
    fullname: Vance
– volume: 32
  start-page: 792
  year: 2004
  ident: ref_38
  article-title: MUSCLE: multiple sequence alignment with high accuracy and high throughput
  publication-title: Nucl. Acids Res.
  doi: 10.1093/nar/gkh340
  contributor:
    fullname: Edgar
– ident: ref_40
– volume: 8
  start-page: 43
  year: 2008
  ident: ref_24
  article-title: Survey of bacterial diversity in chronic wounds using pyrosequencing, DGGE, and full ribosome shotgun sequencing
  publication-title: BMC Micrbiol.
  doi: 10.1186/1471-2180-8-43
  contributor:
    fullname: Dowd
– volume: 37
  start-page: 41
  year: 2007
  ident: ref_54
  article-title: Microbial communities and enzyme activities in soils Ander alternative crop rotations compared to wheat-fallow for the Central Great Plains
  publication-title: Appl. Soil Ecol.
  doi: 10.1016/j.apsoil.2007.03.009
  contributor:
    fullname: Mikha
– volume: 19
  start-page: 493
  year: 1988
  ident: ref_26
  article-title: Automated instrumental analysis of carbon and nitrogen in plant and soil samples
  publication-title: Comm. Soil Sci. Plant Anal.
  doi: 10.1080/00103628809367953
  contributor:
    fullname: McGreehan
– volume: 35
  start-page: 169
  year: 2007
  ident: ref_37
  article-title: The ribosomal database project (RDP-II): introducing myRDP space and quality controlled public data
  publication-title: Nucl. Acids Res.
  doi: 10.1093/nar/gkl889
  contributor:
    fullname: Cole
– volume: 34
  start-page: 997
  year: 2002
  ident: ref_1
  article-title: Fungal-to-bacterial ratios in soils investigated for enhanced C sequestration
  publication-title: Soil Biol. Biochem.
  doi: 10.1016/S0038-0717(02)00033-0
  contributor:
    fullname: Bailey
– volume: 35
  start-page: 1451
  year: 2003
  ident: ref_61
  article-title: Characterization of soil microbial communities under different potato cropping systems by microbial population dynamics, substrate utilization, and fatty acid profile
  publication-title: Soil Biol. Biochem.
  doi: 10.1016/S0038-0717(03)00240-2
  contributor:
    fullname: Larkin
– volume: 35
  start-page: e120
  year: 2007
  ident: ref_19
  article-title: Short pyrosequencing reads suffice for accurate microbial community analysis
  publication-title: Nucl. Acids Res.
  doi: 10.1093/nar/gkm541
  contributor:
    fullname: Liu
– volume: 22
  start-page: 59
  year: 1996
  ident: ref_15
  article-title: The use of phospholipid fatty acid analysis to estimate bacterial and fungal biomass in soil
  publication-title: Biol. Fertil. Soils
  doi: 10.1007/BF00384433
  contributor:
    fullname: Frostegard
– volume: 129
  start-page: 178
  year: 2005
  ident: ref_52
  article-title: Soil enzyme activities suggest advantages of conservation tillage practices in sorghum cultivation under subtropical conditions
  publication-title: Geoderma
  doi: 10.1016/j.geoderma.2004.12.042
  contributor:
    fullname: Roldan
– volume: 40
  start-page: 44
  year: 2004
  ident: ref_6
  article-title: Early impacts of cotton and peanut cropping systems on selected soil chemical, physical, microbiological and biochemical properties
  publication-title: Biol. Fertil. Soils
  doi: 10.1007/s00374-004-0745-3
  contributor:
    fullname: Upchurch
– volume: 45
  start-page: 13
  year: 2010
  ident: ref_23
  article-title: Pyrosequencing analysis for characterization of soil bacterial populations as affected by an integrated livestock-cotton production system
  publication-title: Appl. Soil Ecol.
  doi: 10.1016/j.apsoil.2010.01.005
  contributor:
    fullname: Dowd
– volume: 71
  start-page: 1501
  year: 2005
  ident: ref_41
  article-title: Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness
  publication-title: Appl. Environ. Microbiol.
  doi: 10.1128/AEM.71.3.1501-1506.2005
  contributor:
    fullname: Schloss
– volume: 17
  start-page: 837
  year: 1985
  ident: ref_28
  article-title: Chloroform fumigation and the release of soil nitrogen: A rapid direct extraction method to measure microbial biomass nitrogen in soil
  publication-title: Soil Biol. Biochem.
  doi: 10.1016/0038-0717(85)90144-0
  contributor:
    fullname: Brookes
– ident: ref_46
– volume: 3
  start-page: 992
  year: 2009
  ident: ref_63
  article-title: Abundance, composition, diversity and novelty of soil proteobacteria
  publication-title: ISME J.
  doi: 10.1038/ismej.2009.43
  contributor:
    fullname: Spain
– volume: 26
  start-page: 495
  year: 1997
  ident: ref_9
  article-title: Consequences of rising atmospheric carbon dioxide levels for the belowground microbiota associated with white oak
  publication-title: J. Environ. Qual.
  doi: 10.2134/jeq1997.00472425002600020022x
  contributor:
    fullname: Ringelberg
– ident: ref_12
– volume: 88
  start-page: 1354
  year: 2007
  ident: ref_47
  article-title: Toward an ecological classification of soil bacteria
  publication-title: Ecology
  doi: 10.1890/05-1839
  contributor:
    fullname: Fierer
– volume: 96
  start-page: 68
  year: 2006
  ident: ref_62
  article-title: Effects of different 3-year cropping systems on soil microbial communities and Rhizoctonia diseases of potato
  publication-title: Phytopathology
  doi: 10.1094/PHYTO-96-0068
  contributor:
    fullname: Larkin
– volume: 15
  start-page: 5111
  year: 2009
  ident: ref_64
  article-title: Pyrosequencing-based assessment of soil pH as a predictor of soil bacterial community structure at the continental scale
  publication-title: Appl. Environ. Microbiol.
  doi: 10.1128/AEM.00335-09
  contributor:
    fullname: Lauber
– volume: 22
  start-page: 1167
  year: 1990
  ident: ref_30
  article-title: Measurement of soil microbial biomass C by fumigation: a automated procedure
  publication-title: Soil Biol. Biochem.
  doi: 10.1016/0038-0717(90)90046-3
  contributor:
    fullname: Wu
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Snippet This study evaluated microbial communities of soil (0–10 cm) as affected by dryland cropping systems under different tillage practices after 5 years. The soil...
This study evaluated microbial communities of soil (0-10 cm) as affected by dryland cropping systems under different tillage practices after 5 years. The soil...
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StartPage 910
SubjectTerms Agricultural practices
Agricultural production
Arid zones
bacterial diversity
Community composition
Cotton
Crop rotation
Cropping systems
enzyme activities
FAME analysis
GRACEnet
Microbial activity
Organic matter
Population density
pyrosequencing
Sandy loam
Sandy soils
soil microbial communities
Soil types
Sorghum
Tillage
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Title Microbial Community Composition as Affected by Dryland Cropping Systems and Tillage in a Semiarid Sandy Soil
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