Error Threshold of Fully Random Eigen Model

Species evolution is essentially a random process of interaction between biological populations and their environ- ments. As a result, some physical parameters in evolution models are subject to statistical fluctuations. In this work, two important parameters in the Eigen model, the fitness and muta...

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Published inChinese physics letters Vol. 32; no. 1; pp. 170 - 173
Main Authors Li, Duo-Fang, Cao, Tian-Guang, Geng, Jin-Peng, Qiao, Li-Hua, Gu, Jian-Zhong, Zhan, Yong
Format Journal Article
LanguageEnglish
Published 2015
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ISSN0256-307X
1741-3540
DOI10.1088/0256-307X/32/1/018702

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Abstract Species evolution is essentially a random process of interaction between biological populations and their environ- ments. As a result, some physical parameters in evolution models are subject to statistical fluctuations. In this work, two important parameters in the Eigen model, the fitness and mutation rate, are treated as Gaassian dis- tributed random variables simultaneously to examine the property of the error threshold. Numerical simulation results show that the error threshold in the fully random model appears as a crossover region instead of a phase transition point, and &s the fluctuation strength increases the crossover region becomes smoother and smoother. Furthermore, it is shown that the randomization of the mutation rate plays a dominant role in changing the error threshold in the fully random model, which is consistent with the existing experimental data. The implication of the threshold change due to the randomization for antiviral strategies is discussed.
AbstractList Species evolution is essentially a random process of interaction between biological populations and their environments. As a result, some physical parameters in evolution models are subject to statistical fluctuations. In this work, two important parameters in the Eigen model, the fitness and mutation rate, are treated as Gaussian distributed random variables simultaneously to examine the property of the error threshold. Numerical simulation results show that the error threshold in the fully random model appears as a crossover region instead of a phase transition point, and as the fluctuation strength increases the crossover region becomes smoother and smoother. Furthermore, it is shown that the randomization of the mutation rate plays a dominant role in changing the error threshold in the fully random model, which is consistent with the existing experimental data. The implication of the threshold change due to the randomization for antiviral strategies is discussed.
Species evolution is essentially a random process of interaction between biological populations and their environ- ments. As a result, some physical parameters in evolution models are subject to statistical fluctuations. In this work, two important parameters in the Eigen model, the fitness and mutation rate, are treated as Gaassian dis- tributed random variables simultaneously to examine the property of the error threshold. Numerical simulation results show that the error threshold in the fully random model appears as a crossover region instead of a phase transition point, and &s the fluctuation strength increases the crossover region becomes smoother and smoother. Furthermore, it is shown that the randomization of the mutation rate plays a dominant role in changing the error threshold in the fully random model, which is consistent with the existing experimental data. The implication of the threshold change due to the randomization for antiviral strategies is discussed.
Author LI Duo-Fang CAO Tian-Guang GENG Jin-Peng QIAO Li-Hua GU Jian-Zhong ZHAN Yong
AuthorAffiliation Institute of Biophysics, School of Sciences, Hebei University of Technology, Tianjin 300401 School of Basic Medicine, Heibei Medical University, Shijiazhuang 050017 Nuclear Physics Institute, China Institute of Atomic Energy, Beijing 102413
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Cites_doi 10.1016/0025-5564(74)90110-2
10.1371/journal.ppat.0020136
10.1103/PhysRevA.45.6038
10.1016/j.jtbi.2003.08.018
10.1103/PhysRevE.61.R6052
10.1128/JVI.76.17.8675-8681.2002
10.1002/9780470141243.ch4
10.1016/j.virusres.2004.11.002
10.1016/j.virusres.2004.11.003
10.1016/j.jtbi.2006.12.016
10.1073/pnas.1332668100
10.1088/0256-307X/28/5/058903
10.1140/epjb/e2003-00262-8
10.1088/0305-4470/32/1/001
10.1103/PhysRevE.78.041908
10.1088/0256-307X/27/6/060504
10.7498/aps.63.108701
10.1007/s12064-010-0110-z
10.1103/PhysRevE.69.021913
10.1016/j.virol.2008.10.031
10.1021/j100335a010
10.1021/ja100780p
10.1016/S0022-5193(89)80036-0
10.1016/j.tpb.2013.01.005
10.1016/j.canlet.2012.12.028
10.1073/pnas.0504924103
10.1016/j.cub.2012.06.065
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Species evolution is essentially a random process of interaction between biological populations and their environ- ments. As a result, some physical parameters in evolution models are subject to statistical fluctuations. In this work, two important parameters in the Eigen model, the fitness and mutation rate, are treated as Gaassian dis- tributed random variables simultaneously to examine the property of the error threshold. Numerical simulation results show that the error threshold in the fully random model appears as a crossover region instead of a phase transition point, and &s the fluctuation strength increases the crossover region becomes smoother and smoother. Furthermore, it is shown that the randomization of the mutation rate plays a dominant role in changing the error threshold in the fully random model, which is consistent with the existing experimental data. The implication of the threshold change due to the randomization for antiviral strategies is discussed.
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References 22
23
24
27
28
Eigen M (1) 1971; 9
10
11
12
13
Qiao L H (19) 2014; 63
14
Campos P (15) 1999; 32
16
17
18
2
3
Zhang L (26) 2010; 27
4
5
6
7
8
Li W (25) 2011; 28
9
20
21
References_xml – ident: 21
  doi: 10.1016/0025-5564(74)90110-2
– ident: 4
  doi: 10.1371/journal.ppat.0020136
– ident: 9
  doi: 10.1103/PhysRevA.45.6038
– ident: 6
  doi: 10.1016/j.jtbi.2003.08.018
– ident: 10
  doi: 10.1103/PhysRevE.61.R6052
– ident: 16
  doi: 10.1128/JVI.76.17.8675-8681.2002
– ident: 3
  doi: 10.1002/9780470141243.ch4
– volume: 9
  start-page: 330
  issn: 0193-6204
  year: 1971
  ident: 1
  publication-title: Neurosci. Res. Program Bull.
– ident: 7
  doi: 10.1016/j.virusres.2004.11.002
– ident: 8
  doi: 10.1016/j.virusres.2004.11.003
– ident: 18
  doi: 10.1016/j.jtbi.2006.12.016
– ident: 17
  doi: 10.1073/pnas.1332668100
– volume: 28
  start-page: 058903
  issn: 0256-307X
  year: 2011
  ident: 25
  publication-title: Chin. Phys. Lett.
  doi: 10.1088/0256-307X/28/5/058903
– ident: 5
  doi: 10.1140/epjb/e2003-00262-8
– volume: 32
  start-page: L1
  issn: 0305-4470
  year: 1999
  ident: 15
  publication-title: J. Phys. A: Math. Gen.
  doi: 10.1088/0305-4470/32/1/001
– ident: 12
  doi: 10.1103/PhysRevE.78.041908
– volume: 27
  start-page: 060504
  issn: 0256-307X
  year: 2010
  ident: 26
  publication-title: Chin. Phys. Lett.
  doi: 10.1088/0256-307X/27/6/060504
– volume: 63
  start-page: 108701
  issn: 0372-736X
  year: 2014
  ident: 19
  publication-title: Acta Phys. Sin.
  doi: 10.7498/aps.63.108701
– ident: 13
  doi: 10.1007/s12064-010-0110-z
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  doi: 10.1103/PhysRevE.69.021913
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  doi: 10.1016/j.virol.2008.10.031
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  doi: 10.1021/j100335a010
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  doi: 10.1021/ja100780p
– ident: 14
  doi: 10.1016/S0022-5193(89)80036-0
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  doi: 10.1016/j.tpb.2013.01.005
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  doi: 10.1016/j.canlet.2012.12.028
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Snippet Species evolution is essentially a random process of interaction between biological populations and their environ- ments. As a result, some physical parameters...
Species evolution is essentially a random process of interaction between biological populations and their environments. As a result, some physical parameters...
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SubjectTerms Computer simulation
Crossovers
Errors
Fluctuation
Mathematical models
Mutations
Randomization
Thresholds
本征
物理参数
物种进化
生物种群
相互作用
误差阈值
随机模型
随机过程
Title Error Threshold of Fully Random Eigen Model
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