Error Threshold of Fully Random Eigen Model
Species evolution is essentially a random process of interaction between biological populations and their environ- ments. As a result, some physical parameters in evolution models are subject to statistical fluctuations. In this work, two important parameters in the Eigen model, the fitness and muta...
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Published in | Chinese physics letters Vol. 32; no. 1; pp. 170 - 173 |
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Main Authors | , , , , , |
Format | Journal Article |
Language | English |
Published |
2015
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Subjects | |
Online Access | Get full text |
ISSN | 0256-307X 1741-3540 |
DOI | 10.1088/0256-307X/32/1/018702 |
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Abstract | Species evolution is essentially a random process of interaction between biological populations and their environ- ments. As a result, some physical parameters in evolution models are subject to statistical fluctuations. In this work, two important parameters in the Eigen model, the fitness and mutation rate, are treated as Gaassian dis- tributed random variables simultaneously to examine the property of the error threshold. Numerical simulation results show that the error threshold in the fully random model appears as a crossover region instead of a phase transition point, and &s the fluctuation strength increases the crossover region becomes smoother and smoother. Furthermore, it is shown that the randomization of the mutation rate plays a dominant role in changing the error threshold in the fully random model, which is consistent with the existing experimental data. The implication of the threshold change due to the randomization for antiviral strategies is discussed. |
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AbstractList | Species evolution is essentially a random process of interaction between biological populations and their environments. As a result, some physical parameters in evolution models are subject to statistical fluctuations. In this work, two important parameters in the Eigen model, the fitness and mutation rate, are treated as Gaussian distributed random variables simultaneously to examine the property of the error threshold. Numerical simulation results show that the error threshold in the fully random model appears as a crossover region instead of a phase transition point, and as the fluctuation strength increases the crossover region becomes smoother and smoother. Furthermore, it is shown that the randomization of the mutation rate plays a dominant role in changing the error threshold in the fully random model, which is consistent with the existing experimental data. The implication of the threshold change due to the randomization for antiviral strategies is discussed. Species evolution is essentially a random process of interaction between biological populations and their environ- ments. As a result, some physical parameters in evolution models are subject to statistical fluctuations. In this work, two important parameters in the Eigen model, the fitness and mutation rate, are treated as Gaassian dis- tributed random variables simultaneously to examine the property of the error threshold. Numerical simulation results show that the error threshold in the fully random model appears as a crossover region instead of a phase transition point, and &s the fluctuation strength increases the crossover region becomes smoother and smoother. Furthermore, it is shown that the randomization of the mutation rate plays a dominant role in changing the error threshold in the fully random model, which is consistent with the existing experimental data. The implication of the threshold change due to the randomization for antiviral strategies is discussed. |
Author | LI Duo-Fang CAO Tian-Guang GENG Jin-Peng QIAO Li-Hua GU Jian-Zhong ZHAN Yong |
AuthorAffiliation | Institute of Biophysics, School of Sciences, Hebei University of Technology, Tianjin 300401 School of Basic Medicine, Heibei Medical University, Shijiazhuang 050017 Nuclear Physics Institute, China Institute of Atomic Energy, Beijing 102413 |
Author_xml | – sequence: 1 givenname: Duo-Fang surname: Li fullname: Li, Duo-Fang – sequence: 2 givenname: Tian-Guang surname: Cao fullname: Cao, Tian-Guang – sequence: 3 givenname: Jin-Peng surname: Geng fullname: Geng, Jin-Peng – sequence: 4 givenname: Li-Hua surname: Qiao fullname: Qiao, Li-Hua – sequence: 5 givenname: Jian-Zhong surname: Gu fullname: Gu, Jian-Zhong – sequence: 6 givenname: Yong surname: Zhan fullname: Zhan, Yong |
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Cites_doi | 10.1016/0025-5564(74)90110-2 10.1371/journal.ppat.0020136 10.1103/PhysRevA.45.6038 10.1016/j.jtbi.2003.08.018 10.1103/PhysRevE.61.R6052 10.1128/JVI.76.17.8675-8681.2002 10.1002/9780470141243.ch4 10.1016/j.virusres.2004.11.002 10.1016/j.virusres.2004.11.003 10.1016/j.jtbi.2006.12.016 10.1073/pnas.1332668100 10.1088/0256-307X/28/5/058903 10.1140/epjb/e2003-00262-8 10.1088/0305-4470/32/1/001 10.1103/PhysRevE.78.041908 10.1088/0256-307X/27/6/060504 10.7498/aps.63.108701 10.1007/s12064-010-0110-z 10.1103/PhysRevE.69.021913 10.1016/j.virol.2008.10.031 10.1021/j100335a010 10.1021/ja100780p 10.1016/S0022-5193(89)80036-0 10.1016/j.tpb.2013.01.005 10.1016/j.canlet.2012.12.028 10.1073/pnas.0504924103 10.1016/j.cub.2012.06.065 |
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Notes | 11-1959/O4 Species evolution is essentially a random process of interaction between biological populations and their environ- ments. As a result, some physical parameters in evolution models are subject to statistical fluctuations. In this work, two important parameters in the Eigen model, the fitness and mutation rate, are treated as Gaassian dis- tributed random variables simultaneously to examine the property of the error threshold. Numerical simulation results show that the error threshold in the fully random model appears as a crossover region instead of a phase transition point, and &s the fluctuation strength increases the crossover region becomes smoother and smoother. Furthermore, it is shown that the randomization of the mutation rate plays a dominant role in changing the error threshold in the fully random model, which is consistent with the existing experimental data. The implication of the threshold change due to the randomization for antiviral strategies is discussed. ObjectType-Article-1 SourceType-Scholarly Journals-1 ObjectType-Feature-2 content type line 23 |
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References | 22 23 24 27 28 Eigen M (1) 1971; 9 10 11 12 13 Qiao L H (19) 2014; 63 14 Campos P (15) 1999; 32 16 17 18 2 3 Zhang L (26) 2010; 27 4 5 6 7 8 Li W (25) 2011; 28 9 20 21 |
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Snippet | Species evolution is essentially a random process of interaction between biological populations and their environ- ments. As a result, some physical parameters... Species evolution is essentially a random process of interaction between biological populations and their environments. As a result, some physical parameters... |
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SubjectTerms | Computer simulation Crossovers Errors Fluctuation Mathematical models Mutations Randomization Thresholds 本征 物理参数 物种进化 生物种群 相互作用 误差阈值 随机模型 随机过程 |
Title | Error Threshold of Fully Random Eigen Model |
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