Silencing of PDC-E1β genes affects chloroplast development and amino acid metabolism in tobacco
Chloroplasts, essential to the photosynthetic process, are pivotal in orchestrating the development and growth of plants. The pyruvate dehydrogenase complex (PDC) serves as a link between the citric acid cycle and glycolysis, supplying energy and carbon skeletons vital for plant metabolism. However,...
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| Published in | Industrial crops and products Vol. 225; p. 120488 |
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| Main Authors | , , , , , , , |
| Format | Journal Article |
| Language | English |
| Published |
Elsevier B.V
01.03.2025
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| Subjects | |
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| Abstract | Chloroplasts, essential to the photosynthetic process, are pivotal in orchestrating the development and growth of plants. The pyruvate dehydrogenase complex (PDC) serves as a link between the citric acid cycle and glycolysis, supplying energy and carbon skeletons vital for plant metabolism. However, the involvement of the PDC in chloroplast development is not yet fully elucidated. Here, we provide evidence for the role of the PDC E1 component β subunit (PDC-E1β) in tobacco (Nicotiana tabacum L.) chloroplast development and amino acid metabolism. Transgenic tobacco plants with RNA interference (RNAi) targeting four PDC-E1β genes displayed a pale-green variegated leaf phenotype. The phenotype exhibited decreased chlorophyll and defective chloroplast development. Transcriptome and metabolome analyses revealed significant alterations in genes and metabolites related to photosynthesis, amino acid metabolism, and chlorophyll biosynthesis. Silencing of PDC-E1β genes downregulated PEP-dependent chloroplast gene expression and chloroplast protein levels. Moreover, silencing of PDC-E1β genes disrupted amino acid metabolism, with the variegated phenotype partially reversible by exogenous tryptophan supplementation. Our findings elucidate the significance of PDC-E1β in chloroplast development and the interconnected metabolic pathways that regulate plant organelle function. This research provides novel perspectives on the intricate mechanisms governing chloroplast development and the metabolic pathways that sustain it.
•PDC-E1β silencing in tobacco results in variegated leaves.•Disruption of PDC-E1β genes affect photosynthesis and amino acid metabolism.•Tryptophan supplementation partially rescues the variegated leaf phenotype. |
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| AbstractList | Chloroplasts, essential to the photosynthetic process, are pivotal in orchestrating the development and growth of plants. The pyruvate dehydrogenase complex (PDC) serves as a link between the citric acid cycle and glycolysis, supplying energy and carbon skeletons vital for plant metabolism. However, the involvement of the PDC in chloroplast development is not yet fully elucidated. Here, we provide evidence for the role of the PDC E1 component β subunit (PDC-E1β) in tobacco (Nicotiana tabacum L.) chloroplast development and amino acid metabolism. Transgenic tobacco plants with RNA interference (RNAi) targeting four PDC-E1β genes displayed a pale-green variegated leaf phenotype. The phenotype exhibited decreased chlorophyll and defective chloroplast development. Transcriptome and metabolome analyses revealed significant alterations in genes and metabolites related to photosynthesis, amino acid metabolism, and chlorophyll biosynthesis. Silencing of PDC-E1β genes downregulated PEP-dependent chloroplast gene expression and chloroplast protein levels. Moreover, silencing of PDC-E1β genes disrupted amino acid metabolism, with the variegated phenotype partially reversible by exogenous tryptophan supplementation. Our findings elucidate the significance of PDC-E1β in chloroplast development and the interconnected metabolic pathways that regulate plant organelle function. This research provides novel perspectives on the intricate mechanisms governing chloroplast development and the metabolic pathways that sustain it. Chloroplasts, essential to the photosynthetic process, are pivotal in orchestrating the development and growth of plants. The pyruvate dehydrogenase complex (PDC) serves as a link between the citric acid cycle and glycolysis, supplying energy and carbon skeletons vital for plant metabolism. However, the involvement of the PDC in chloroplast development is not yet fully elucidated. Here, we provide evidence for the role of the PDC E1 component β subunit (PDC-E1β) in tobacco (Nicotiana tabacum L.) chloroplast development and amino acid metabolism. Transgenic tobacco plants with RNA interference (RNAi) targeting four PDC-E1β genes displayed a pale-green variegated leaf phenotype. The phenotype exhibited decreased chlorophyll and defective chloroplast development. Transcriptome and metabolome analyses revealed significant alterations in genes and metabolites related to photosynthesis, amino acid metabolism, and chlorophyll biosynthesis. Silencing of PDC-E1β genes downregulated PEP-dependent chloroplast gene expression and chloroplast protein levels. Moreover, silencing of PDC-E1β genes disrupted amino acid metabolism, with the variegated phenotype partially reversible by exogenous tryptophan supplementation. Our findings elucidate the significance of PDC-E1β in chloroplast development and the interconnected metabolic pathways that regulate plant organelle function. This research provides novel perspectives on the intricate mechanisms governing chloroplast development and the metabolic pathways that sustain it. •PDC-E1β silencing in tobacco results in variegated leaves.•Disruption of PDC-E1β genes affect photosynthesis and amino acid metabolism.•Tryptophan supplementation partially rescues the variegated leaf phenotype. |
| ArticleNumber | 120488 |
| Author | Xia, Kaitong Zhang, Hui Li, Dingjie Li, Zunqiang Zhou, Huina Xie, Xiaodong Zhai, Niu Xu, Guoyun |
| Author_xml | – sequence: 1 givenname: Dingjie orcidid: 0009-0005-2863-3461 surname: Li fullname: Li, Dingjie organization: Zhengzhou Tobacco Research Institute of CNTC, Zhengzhou 450001, China – sequence: 2 givenname: Kaitong surname: Xia fullname: Xia, Kaitong organization: Hunan University, Changsha 410082, China – sequence: 3 givenname: Hui surname: Zhang fullname: Zhang, Hui organization: Zhengzhou Tobacco Research Institute of CNTC, Zhengzhou 450001, China – sequence: 4 givenname: Zunqiang surname: Li fullname: Li, Zunqiang organization: Heilongjiang Company Tobacco Science Institute of CNTC, Harbin 150076, China – sequence: 5 givenname: Xiaodong surname: Xie fullname: Xie, Xiaodong organization: Beijing Life Science Academy, Beijing 102200, China – sequence: 6 givenname: Huina surname: Zhou fullname: Zhou, Huina organization: Zhengzhou Tobacco Research Institute of CNTC, Zhengzhou 450001, China – sequence: 7 givenname: Niu surname: Zhai fullname: Zhai, Niu email: zhainiu2005@163.com organization: Zhengzhou Tobacco Research Institute of CNTC, Zhengzhou 450001, China – sequence: 8 givenname: Guoyun orcidid: 0000-0001-6681-1875 surname: Xu fullname: Xu, Guoyun email: xgyun1018@163.com organization: Zhengzhou Tobacco Research Institute of CNTC, Zhengzhou 450001, China |
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| Keywords | Pyruvate dehydrogenase Amino acids Tobacco Chloroplast development |
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| SubjectTerms | amino acid metabolism Amino acids biosynthesis carbon chlorophyll Chloroplast development chloroplast genes chloroplast proteins chloroplasts energy gene expression genetically modified organisms glycolysis leaves metabolites metabolome Nicotiana tabacum phenotype photosynthesis Pyruvate dehydrogenase pyruvate dehydrogenase (lipoamide) RNA interference Tobacco transcriptome tricarboxylic acid cycle tryptophan |
| Title | Silencing of PDC-E1β genes affects chloroplast development and amino acid metabolism in tobacco |
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