Ecological significance of newly recorded halophilic Pharyngomonas kirbyi from two Korean solar salterns

Background: Hypersaline environments (> 40 practical salinity units [PSU]) represent some of the most extreme conditions on Earth, supporting a variety of halophilic and halotolerant bacteria, archaea, and protists. The taxon Heterolobosea includes numerous halophilic protists, making it a valuab...

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Published inJournal of Ecology and Environment Vol. 48; pp. 405 - 415
Main Authors Lee, Hyeon Been, Park, Jong Soo
Format Journal Article
LanguageEnglish
Published The Ecological Society of Korea 01.09.2024
한국생태학회
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ISSN2287-8327
2288-1220
DOI10.5141/jee.24.073

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Abstract Background: Hypersaline environments (> 40 practical salinity units [PSU]) represent some of the most extreme conditions on Earth, supporting a variety of halophilic and halotolerant bacteria, archaea, and protists. The taxon Heterolobosea includes numerous halophilic protists, making it a valuable model for studying eukaryotic adaptation to high salinity. Particularly, the genus Pharyngomonas, a deep-branching lineage within Heterolobosea, comprises mainly obligate halophiles, providing insights into early protist adaptations in hypersaline environments. Additionally, these protozoa play crucial ecological roles as grazers of bacteria and archaea, and are prey for higher trophic levels in hypersaline environments. Results: In the present study, two previously reported amoeboflagellates were isolated for the first time from hypersaline waters (~300 PSU) in two solar salterns in the Republic of Korea. Microscopic observations revealed that both strains exhibited the characteristic morphologies of Pharyngomonas, including amoeboid, flagellate, and cyst forms. Molecular phylogenetic analysis of their 18S rRNA gene sequences confirmed their close relationship to known Pharyngomonas kirbyi strains. The two strains demonstrated growth within a salinity range of 75–200 PSU, with optimal growth observed at 75–100 PSU, confirming their status as true halophiles. All known P. kirbyi strains are obligate halophiles, exhibiting a clear instance of adaptive radiation of halophilic eukaryotes. Additionally, the genus Pharyngomonas has been found in hypersaline environments across multiple continents (Asia, Europe, North America, Australia, and Africa), suggesting that it plays an ecologically significant role as a grazer of prokaryotes or prey for higher trophic levels in these habitats. Conclusions: On the bases of morphological and molecular analyses, two strains identified as P. kirbyi were isolated and characterized for the first time from solar salterns in the Republic of Korea. This discovery highlights the presence and adaptation of halophilic eukaryotes in such extreme environments. The confirmation of these strains as obligate halophiles provides additional evidence for the adaptive radiation of halophilic eukaryotes. Furthermore, the ecological role of Pharyngomonas species underscores their importance as trophic regulators in hypersaline ecosystems. These findings contribute to a deeper understanding of the diversity, adaptation, and ecological functions of halophilic eukaryotes in extreme environments.
AbstractList Background: Hypersaline environments (> 40 practical salinity units [PSU]) represent some of the most extreme conditions on Earth, supporting a variety of halophilic and halotolerant bacteria, archaea, and protists. The taxon Heterolobosea includes numerous halophilic protists, making it a valuable model for studying eukaryotic adaptation to high salinity. Particularly, the genus Pharyngomonas, a deep-branching lineage within Heterolobosea, comprises mainly obligate halophiles, providing insights into early protist adaptations in hypersaline environments. Additionally, these protozoa play crucial ecological roles as grazers of bacteria and archaea, and are prey for higher trophic levels in hypersaline environments. Results: In the present study, two previously reported amoeboflagellates were isolated for the first time from hypersaline waters (~300 PSU) in two solar salterns in the Republic of Korea. Microscopic observations revealed that both strains exhibited the characteristic morphologies of Pharyngomonas, including amoeboid, flagellate, and cyst forms. Molecular phylogenetic analysis of their 18S rRNA gene sequences confirmed their close relationship to known Pharyngomonas kirbyi strains. The two strains demonstrated growth within a salinity range of 75–200 PSU, with optimal growth observed at 75–100 PSU, confirming their status as true halophiles. All known P. kirbyi strains are obligate halophiles, exhibiting a clear instance of adaptive radiation of halophilic eukaryotes. Additionally, the genus Pharyngomonas has been found in hypersaline environments across multiple continents (Asia, Europe, North America, Australia, and Africa), suggesting that it plays an ecologically significant role as a grazer of prokaryotes or prey for higher trophic levels in these habitats. Conclusions: On the bases of morphological and molecular analyses, two strains identified as P. kirbyi were isolated and characterized for the first time from solar salterns in the Republic of Korea. This discovery highlights the presence and adaptation of halophilic eukaryotes in such extreme environments. The confirmation of these strains as obligate halophiles provides additional evidence for the adaptive radiation of halophilic eukaryotes. Furthermore, the ecological role of Pharyngomonas species underscores their importance as trophic regulators in hypersaline ecosystems. These findings contribute to a deeper understanding of the diversity, adaptation, and ecological functions of halophilic eukaryotes in extreme environments.
Background: Hypersaline environments (> 40 practical salinity units [PSU]) represent some of the most extreme conditions on Earth, supporting a variety of halophilic and halotolerant bacteria, archaea, and protists. The taxon Heterolobosea includes numerous halophilic protists, making it a valuable model for studying eukaryotic adaptation to high salinity. Particularly, the genus Pharyngomonas, a deep-branching lineage within Heterolobosea, comprises mainly obligate halophiles, providing insights into early protist adaptations in hypersaline environments. Additionally, these protozoa play crucial ecological roles as grazers of bacteria and archaea, and are prey for higher trophic levels in hypersaline environments. Results: In the present study, two previously reported amoeboflagellates were isolated for the first time from hypersaline waters (~300 PSU) in two solar salterns in the Republic of Korea. Microscopic observations revealed that both strains exhibited the characteristic morphologies of Pharyngomonas, including amoeboid, flagellate, and cyst forms. Molecular phylogenetic analysis of their 18S rRNA gene sequences confirmed their close relationship to known Pharyngomonas kirbyi strains. The two strains demonstrated growth within a salinity range of 75–200 PSU, with optimal growth observed at 75–100 PSU, confirming their status as true halophiles. All known P. kirbyi strains are obligate halophiles, exhibiting a clear instance of adaptive radiation of halophilic eukaryotes. Additionally, the genus Pharyngomonas has been found in hypersaline environments across multiple continents (Asia, Europe, North America, Australia, and Africa), suggesting that it plays an ecologically significant role as a grazer of prokaryotes or prey for higher trophic levels in these habitats. Conclusions: On the bases of morphological and molecular analyses, two strains identified as P. kirbyi were isolated and characterized for the first time from solar salterns in the Republic of Korea. This discovery highlights the presence and adaptation of halophilic eukaryotes in such extreme environments. The confirmation of these strains as obligate halophiles provides additional evidence for the adaptive radiation of halophilic eukaryotes. Furthermore, the ecological role of Pharyngomonas species underscores their importance as trophic regulators in hypersaline ecosystems. These findings contribute to a deeper understanding of the diversity, adaptation, and ecological functions of halophilic eukaryotes in extreme environments. KCI Citation Count: 0
ArticleNumber 37
Author Park, Jong Soo
Lee, Hyeon Been
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Cites_doi 10.1007/978-3-642-74370-2
10.1016/j.protis.2007.03.004
10.1111/j.1574-6941.2000.tb00708.x
10.1111/j.1550-7408.2008.00356.x
10.1016/j.protis.2011.05.004
10.1007/BF00025180
10.1007/s00792-014-0713-2
10.1007/s00792-011-0416-x
10.3354/ame033173
10.1093/molbev/msu300
10.1134/S1062359015090083
10.2307/3222045
10.1128/AEM.66.7.3052-3057.2000
10.1007/978-94-007-5539-0_3
10.1093/molbev/mst010
10.1093/gbe/evw152
10.1007/s00248-021-01918-1
10.1016/j.protis.2020.125770
10.1007/0-306-48053-0
10.1016/j.protis.2008.10.002
10.1111/jeu.12260
10.1111/jeu.12172
10.1080/00222939000770571
10.1016/j.protis.2012.08.002
10.1007/s00792-006-0001-x
10.1016/0378-1119(88)90066-2
10.1111/j.1550-7408.2012.00641.x
10.1111/jeu.12664
10.1016/j.protis.2015.06.001
10.1093/molbev/mst024
10.1186/1746-1448-4-2
10.1007/s10750-004-9356-0
10.1093/sysbio/syu084
10.1038/nmeth.2019
10.1111/jeu.12495
10.5141/jee.23.030
10.1371/journal.pone.0216188
10.3389/fmicb.2022.960621
10.1093/sysbio/sys029
10.1007/978-3-319-28149-0_10
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References ref13
ref35
ref12
ref34
ref15
ref37
ref14
ref36
ref31
ref30
ref11
ref33
ref10
ref32
ref2
ref1
ref17
ref39
ref16
ref38
ref19
ref18
ref24
ref23
ref26
ref25
ref20
ref42
ref41
ref22
ref44
ref21
ref43
ref28
ref27
ref29
ref8
ref7
ref9
ref4
ref3
ref6
ref5
ref40
References_xml – ident: ref11
  doi: 10.1007/978-3-642-74370-2
– ident: ref35
  doi: 10.1016/j.protis.2007.03.004
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  doi: 10.1111/j.1574-6941.2000.tb00708.x
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  doi: 10.1111/j.1550-7408.2008.00356.x
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  doi: 10.1016/j.protis.2011.05.004
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  doi: 10.1007/BF00025180
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  doi: 10.1007/s00792-014-0713-2
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  doi: 10.1007/s00792-011-0416-x
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  doi: 10.3354/ame033173
– ident: ref23
  doi: 10.1093/molbev/msu300
– ident: ref37
  doi: 10.1134/S1062359015090083
– ident: ref14
  doi: 10.2307/3222045
– ident: ref1
  doi: 10.1128/AEM.66.7.3052-3057.2000
– ident: ref44
  doi: 10.1007/978-94-007-5539-0_3
– ident: ref13
  doi: 10.1093/molbev/mst010
– ident: ref9
  doi: 10.1093/gbe/evw152
– ident: ref18
  doi: 10.1007/s00248-021-01918-1
– ident: ref2
  doi: 10.1016/j.protis.2020.125770
– ident: ref24
  doi: 10.1007/0-306-48053-0
– ident: ref34
  doi: 10.1016/j.protis.2008.10.002
– ident: ref4
– ident: ref33
  doi: 10.1111/jeu.12260
– ident: ref15
  doi: 10.1111/jeu.12172
– ident: ref17
  doi: 10.1080/00222939000770571
– ident: ref8
  doi: 10.1016/j.protis.2012.08.002
– ident: ref28
  doi: 10.1007/s00792-006-0001-x
– ident: ref21
  doi: 10.1016/0378-1119(88)90066-2
– ident: ref40
– ident: ref29
  doi: 10.1111/j.1550-7408.2012.00641.x
– ident: ref12
  doi: 10.1111/jeu.12664
– ident: ref32
  doi: 10.1016/j.protis.2015.06.001
– ident: ref22
  doi: 10.1093/molbev/mst024
– ident: ref25
  doi: 10.1186/1746-1448-4-2
– ident: ref43
  doi: 10.1007/s10750-004-9356-0
– ident: ref6
  doi: 10.1093/sysbio/syu084
– ident: ref41
  doi: 10.1038/nmeth.2019
– ident: ref10
  doi: 10.1111/jeu.12495
– ident: ref20
  doi: 10.5141/jee.23.030
– ident: ref42
  doi: 10.1371/journal.pone.0216188
– ident: ref19
  doi: 10.3389/fmicb.2022.960621
– ident: ref39
  doi: 10.1093/sysbio/sys029
– ident: ref16
– ident: ref26
  doi: 10.1007/978-3-319-28149-0_10
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SubjectTerms adaptive radiation
bacterivore
halophiles
hypersaline environments
pharyngomonas
생물학
Title Ecological significance of newly recorded halophilic Pharyngomonas kirbyi from two Korean solar salterns
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