PHYLOGENY OF THE GENUS CHLOROCOCCUM: A STUDY OF 18S AND 26S rRNA GENE SEQUENCES
Phylogenetic studies of 18S rRNA gene sequence data support an alliance of the green algal genus, Chlorococcum, with other chlamydomonadalean taxa that produce walled, motile stages. Moreover, these phylogenetic studies indicate that Chlorococcum is not monophyletic, but rather falls into two distin...
Saved in:
Published in | Journal of phycology Vol. 36; no. s3; p. 47 |
---|---|
Main Authors | , , |
Format | Journal Article |
Language | English |
Published |
Boston, MA, USA
Blackwell Science Inc
01.12.2000
|
Subjects | |
Online Access | Get full text |
Cover
Loading…
Abstract | Phylogenetic studies of 18S rRNA gene sequence data support an alliance of the green algal genus, Chlorococcum, with other chlamydomonadalean taxa that produce walled, motile stages. Moreover, these phylogenetic studies indicate that Chlorococcum is not monophyletic, but rather falls into two distinct lineages. However, these molecular phylogenetic studies were based on only a few taxa in a genus that exhibits marked habitat diversity. In particular, numerous species of Chlorococcum currently in the UTEX collection have been isolated from naturally acidic environments. Except for a few groups (e.g., desmids), acidic environments are not generally regarded as niches for widespread exploitation by green algae. A new investigation of diversity among species of Chlorococcum included broader taxon and data sampling schemes. Sequence data from both the nuclear‐encoded 18S and 26S rRNA genes were collected from 17 different UTEX and SAG isolates of Chlorococcum. In addition, controlled growth experiments at varying acidity (pH 5.0, 6.0, and 8.0) were conducted. Results of these investigations suggest that the Chlorococcum‐like morphology has evolved in at least three lineages. Furthermore, these data suggest that the ability to grow optimally at low pH has independently evolved in several lineages. |
---|---|
AbstractList | Phylogenetic studies of 18S rRNA gene sequence data support an alliance of the green algal genus, Chlorococcum, with other chlamydomonadalean taxa that produce walled, motile stages. Moreover, these phylogenetic studies indicate that Chlorococcum is not monophyletic, but rather falls into two distinct lineages. However, these molecular phylogenetic studies were based on only a few taxa in a genus that exhibits marked habitat diversity. In particular, numerous species of Chlorococcum currently in the UTEX collection have been isolated from naturally acidic environments. Except for a few groups (e.g., desmids), acidic environments are not generally regarded as niches for widespread exploitation by green algae. A new investigation of diversity among species of Chlorococcum included broader taxon and data sampling schemes. Sequence data from both the nuclear-encoded 18S and 26S rRNA genes were collected from 17 different UTEX and SAG isolates of Chlorococcum. In addition, controlled growth experiments at varying acidity (pH 5.0, 6.0, and 8.0) were conducted. Results of these investigations suggest that the Chlorococcum-like morphology has evolved in at least three lineages. Furthermore, these data suggest that the ability to grow optimally at low pH has independently evolved in several lineages. Phylogenetic studies of 18S rRNA gene sequence data support an alliance of the green algal genus, Chlorococcum , with other chlamydomonadalean taxa that produce walled, motile stages. Moreover, these phylogenetic studies indicate that Chlorococcum is not monophyletic, but rather falls into two distinct lineages. However, these molecular phylogenetic studies were based on only a few taxa in a genus that exhibits marked habitat diversity. In particular, numerous species of Chlorococcum currently in the UTEX collection have been isolated from naturally acidic environments. Except for a few groups (e.g., desmids), acidic environments are not generally regarded as niches for widespread exploitation by green algae. A new investigation of diversity among species of Chlorococcum included broader taxon and data sampling schemes. Sequence data from both the nuclear‐encoded 18S and 26S rRNA genes were collected from 17 different UTEX and SAG isolates of Chlorococcum. In addition, controlled growth experiments at varying acidity (pH 5.0, 6.0, and 8.0) were conducted. Results of these investigations suggest that the Chlorococcum ‐like morphology has evolved in at least three lineages. Furthermore, these data suggest that the ability to grow optimally at low pH has independently evolved in several lineages. |
Author | Buchheim, J.A. Buchheim Michalopulos, J.U. |
Author_xml | – sequence: 1 givenname: J.U. surname: Michalopulos fullname: Michalopulos, J.U. organization: Department of Biological Science, The University of Tulsa, 600 South College Avenue, Tulsa, OK 74104 USA – sequence: 2 givenname: J.A. surname: Buchheim fullname: Buchheim, J.A. organization: Department of Biological Science, The University of Tulsa, 600 South College Avenue, Tulsa, OK 74104 USA – sequence: 3 surname: Buchheim fullname: Buchheim organization: Department of Biological Science, The University of Tulsa, 600 South College Avenue, Tulsa, OK 74104 USA |
BookMark | eNqVkF1PwjAUhhuDifjxH3phvNts161djTcwJoi4oWMiVyfrKAnIh64a8d_bgeHe3vQkfd73NM8paqw3a43QJSUuJT6_Xrg08KQThlS4VErpEnuoQ33ibo9Q8_DYQE1CPM9h3Ocn6NSYheUED2gTpcPeZJB242SC0zs86sXYznmGo94gfU6jNIryxxvcwtko7-wQGma4lXSwxzNcPSetmo9xFj_lcRLF2Tk6nhVLoy_-7jOU38WjqOfYJfdRa-CUNKTE8QJP-KoMpeJFyApJyxmbBlNZcu3LKQ-FXyglpVL2y0yyQE0L5bGyFEoJLYjPztDVvve92nx8afMJq7kp9XJZrPXmywAVXHqccQve7sGy2hhT6Rm8V_NVUf0AJVBbhAXUoqAWBbVF2FkEaxG2Nt7ex7_nS_3zryz0h5PdaEucfcncfOrtoaSo3oALJgIYJ114fRi8dNv9MTyxX_tog44 |
ContentType | Journal Article |
DBID | BSCLL AAYXX CITATION F1W H95 L.G |
DOI | 10.1046/j.1529-8817.1999.00001-140.x |
DatabaseName | Istex CrossRef ASFA: Aquatic Sciences and Fisheries Abstracts Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources Aquatic Science & Fisheries Abstracts (ASFA) Professional |
DatabaseTitle | CrossRef Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources Aquatic Science & Fisheries Abstracts (ASFA) Professional ASFA: Aquatic Sciences and Fisheries Abstracts |
DatabaseTitleList | Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources CrossRef |
DeliveryMethod | fulltext_linktorsrc |
Discipline | Botany |
EISSN | 1529-8817 |
Editor | Millie, DF Kurgens, P (eds) |
Editor_xml | – fullname: Millie, DF – fullname: Kurgens, P (eds) |
EndPage | 47 |
ExternalDocumentID | 10_1046_j_1529_8817_1999_00001_140_x JPY1-140 ark_67375_WNG_XKLVGBJW_Q |
Genre | abstract |
GroupedDBID | -DZ -~X .3N .GA .Y3 05W 0R~ 10A 1OB 1OC 29L 31~ 33P 3SF 4.4 50Y 50Z 51W 51X 52M 52N 52O 52P 52S 52T 52U 52W 52X 53G 5GY 5HH 5LA 5VS 66C 702 7PT 8-0 8-1 8-3 8-4 8-5 85S 8UM 930 A03 AAESR AAEVG AAHHS AANLZ AAONW AASGY AAXRX AAZKR ABCQN ABCUV ABDBF ABEML ABHUG ABJNI ABPPZ ABPTK ABPVW ACAHQ ACBWZ ACCFJ ACCZN ACGFS ACNCT ACPOU ACPRK ACSCC ACSMX ACXBN ACXME ACXQS ADAWD ADBBV ADDAD ADEOM ADIZJ ADKYN ADMGS ADOZA ADXAS ADZMN AEEZP AEIGN AEIMD AENEX AEQDE AETEA AEUQT AEUYR AFBPY AFEBI AFFPM AFGKR AFPWT AFRAH AFVGU AFZJQ AGJLS AHBTC AHEFC AI. AIURR AIWBW AJBDE AJXKR ALAGY ALMA_UNASSIGNED_HOLDINGS ALUQN AMBMR AMYDB ASPBG ATUGU AUFTA AVWKF AZBYB AZFZN AZVAB BAFTC BDRZF BFHJK BHBCM BIYOS BMNLL BMXJE BNHUX BROTX BRXPI BSCLL BY8 CAG COF CS3 D-E D-F DCZOG DPXWK DR2 DRFUL DRSTM DU5 EAD EAP EBC EBD EBS EDH EJD EMK EST ESX F00 F01 F04 F5P FEDTE FZ0 G-S G.N GODZA H.T H.X HF~ HVGLF HZI HZ~ H~9 IHE IX1 J0M K48 LATKE LC2 LC3 LEEKS LH4 LITHE LOXES LP6 LP7 LUTES LW6 LYRES MEWTI MK4 MRFUL MRSTM MSFUL MSSTM MVM MXFUL MXSTM N04 N05 N9A NEJ NF~ NHB O66 O9- P2W P2X P4D PALCI Q.N Q11 QB0 R.K RIWAO RJQFR ROL RX1 S10 SAMSI SUPJJ TN5 TUS TWZ UB1 UKR UPT VH1 W8V W99 WBKPD WH7 WIH WIK WNSPC WOHZO WQJ WRC WXSBR WYISQ XG1 XJT XOL YBU YQT YR2 ZCG ZZTAW ~02 ~IA ~KM ~WT AAHBH AITYG HGLYW OIG AAYXX CITATION F1W H95 L.G |
ID | FETCH-LOGICAL-c1810-25274bc89b6a83a91cf3d5d9c6e49d6874abb99bb3643935bdab23cc7bb7e7043 |
IEDL.DBID | DR2 |
ISSN | 0022-3646 |
IngestDate | Fri Oct 25 09:30:01 EDT 2024 Thu Sep 26 19:58:28 EDT 2024 Sat Aug 24 00:55:13 EDT 2024 Wed Jan 17 05:09:32 EST 2024 |
IsPeerReviewed | true |
IsScholarly | true |
Issue | s3 |
Language | English |
LinkModel | DirectLink |
MergedId | FETCHMERGED-LOGICAL-c1810-25274bc89b6a83a91cf3d5d9c6e49d6874abb99bb3643935bdab23cc7bb7e7043 |
Notes | ArticleID:JPY1-140 istex:0CD36DEAFCFE8272F9DEB4437AF066F4337A7F8D ark:/67375/WNG-XKLVGBJW-Q ObjectType-Article-2 SourceType-Scholarly Journals-1 ObjectType-Conference-1 ObjectType-Feature-3 content type line 23 SourceType-Conference Papers & Proceedings-2 |
PQID | 17692636 |
PQPubID | 23462 |
PageCount | 1 |
ParticipantIDs | proquest_miscellaneous_17692636 crossref_primary_10_1046_j_1529_8817_1999_00001_140_x wiley_primary_10_1046_j_1529_8817_1999_00001_140_x_JPY1_140 istex_primary_ark_67375_WNG_XKLVGBJW_Q |
PublicationCentury | 2000 |
PublicationDate | December 2000 |
PublicationDateYYYYMMDD | 2000-12-01 |
PublicationDate_xml | – month: 12 year: 2000 text: December 2000 |
PublicationDecade | 2000 |
PublicationPlace | Boston, MA, USA |
PublicationPlace_xml | – name: Boston, MA, USA |
PublicationTitle | Journal of phycology |
PublicationTitleAlternate | Journal of Phycology |
PublicationYear | 2000 |
Publisher | Blackwell Science Inc |
Publisher_xml | – name: Blackwell Science Inc |
SSID | ssj0007651 |
Score | 1.6334172 |
Snippet | Phylogenetic studies of 18S rRNA gene sequence data support an alliance of the green algal genus, Chlorococcum, with other chlamydomonadalean taxa that produce... Phylogenetic studies of 18S rRNA gene sequence data support an alliance of the green algal genus, Chlorococcum , with other chlamydomonadalean taxa that... |
SourceID | proquest crossref wiley istex |
SourceType | Aggregation Database Publisher |
StartPage | 47 |
SubjectTerms | Chlamydomonadales Chlorococcum Chlorophyta Freshwater |
Title | PHYLOGENY OF THE GENUS CHLOROCOCCUM: A STUDY OF 18S AND 26S rRNA GENE SEQUENCES |
URI | https://api.istex.fr/ark:/67375/WNG-XKLVGBJW-Q/fulltext.pdf https://onlinelibrary.wiley.com/doi/abs/10.1046%2Fj.1529-8817.1999.00001-140.x https://search.proquest.com/docview/17692636 |
Volume | 36 |
hasFullText | 1 |
inHoldings | 1 |
isFullTextHit | |
isPrint | |
link | http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwrV07b9swECaCpCi69F3E6YtD0E2GKVGk2EyOKltwHSmxosaeCFKihgawA9cGkvz68qjYTQp0KNqNAx_gHR_fkXffIXRYU4tR66jxDFHGoyZsPEUi4zWUcAJ04cLFrZ1kLC3paBpOd1C2iYVp-SG2D26wM9x5DRtc6TYLSc-x236H1D3CiyLCIeROOCZC4lmDoQuYErj1ACNNfrFJcRaSLXk4o-wxOrz3yfnHzh7cWHsg_OsHcPQ-qHW30uAZWmzm0zqjXHbXK92tbn-jevx_E36Ont4BWNxvV9wLtGPmL9Gj44UFmTevUH6azsb5MMlmOB_g8zTBtlwWOE7H-SSP8zguTz7jPgYg6qqQqMD97Av2WYGXk6wP9RNcJGclvH0Vr1E5SM7j1LvL2eBVFiv0PD-0Zq6uIqGZigIlSNUEdViLihkqahZxqrQWQusAoFAQ6lppP6gqrjU3vEeDN2h3vpibfYTt0aJ6VDda04CqSijfUGrAwOOqst13ULjRi7xqqTmk-1KnEH4GspIgKwmykk5WEhzZrjvok1PitpFaXoJ7Gw_lRTaU06_jb8Pj0YU866CPGy1Lu-ngJ0XNzWL9QxLOhM8C1kFHTmN_Nb4cnc5c8eCfWr9FTxwtgHOteYd2V8u1eW8B0kp_cMv-J0wR9ok |
link.rule.ids | 315,786,790,1382,27955,27956,46327,46751 |
linkProvider | Wiley-Blackwell |
linkToHtml | http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwrV3Nb9MwFLemDQGX8S06PubDxC2lTvwRw6nL0oYuTbamZe3JshPnMqmdSisN_npspy0bEgcENx9sR37P7_lnv_d-AeCkwgajVmHtaSS1hzWpPYlC7dUYMWTpwrmrWxtmNJngwZRM90C-rYVp-CF2D27WMpy_tgZuH6Q_bsKSjZUTn3thiJitueOOihB55sbQNqDywHgAYi31bPSLT4pRgnb04RTTh-DkTpjzj7PdO7MOrPhv7wHSu7DWnUu9J-Bmu6ImHeW6vV6pdvnjN7LH_7jkp-Bwg2Fht9l0z8Cenj8HD04XBmd-fwHyi2SW5v04m8G8B8dJDE17UsAoSfNRHuVRNBl-gl1osajrgsICdrMz6NMCLkdZ1_aPYRFfTuzzV_ESTHrxOEq8zW8bvNLAhY7nE3PTVWXIFZVhIDkq66AiFS-pxryiIcNSKc6VCiwaCoiqpPKDsmRKMc06OHgF9ueLuX4NoPEusoNVrRQOsCy59DXG2t7xmCzN9C1AtooRNw07h3BRdWwr0KyshJWVsLISTlbC5rLdtsAHp8XdILm8thlujIirrC-m5-nX_ungSly2wPFWzcLYnQ2myLlerL8JxCj3aUBb4LNT2V99XwwuZq559E-jj8GjZDxMRfolO38DHjuWAJdp8xbsr5Zr_c7gpZV672zgJ_3e-qk |
linkToPdf | http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwrV3Pb9MwFLamDU1cGD9FGTAfJm4pdeLYMZy6NG3ouqRrFtaeLNtxLpPaqbTS4K_HdtqyIXFAcPPBduT3_Ozv-b33BYDTChuMWkW1p5HQHtZh7QkUaa_GiCJLF85c3dpFRtISD6fhdA9k21qYhh9i9-BmLcOd19bAb6v64yYq2Rh56DMvihC1JXfMMREizzgMbYMpDzAJfOuM9Sa_6KQoCdGOPZxgcghO70U5_zjbgyvrwEr_7gEevY9q3bXUPwKL7YKabJSb9nol2-rHb1yP_2_FT8GTDYKF3WbLPQN7ev4cPDpbGJT5_QXIx-lslA-SbAbzPrxKE2jaZQHjdJRP8jiP4_LiE-xCi0RdFxQVsJv1oE8KuJxkXds_gUVyWdrHr-IlKPvJVZx6m582eMqAhY7nh8bPlSpikogoEAypOqjCiimiMatIRLGQkjEpA4uFglBWQvqBUlRKqmkHB6_A_nwx168BNGeL6GBZS4kDLBQTvsZYWw-PCmWmb4Fwqxd-23BzcBdTx7b-zMqKW1lxKyvuZMVtJttdC3xwStwNEssbm99GQ36dDfj0fPR1cDa85pctcLLVMjdWZ0MpYq4X628cUcJ8EpAW-Ow09lff58PxzDXf_NPoE3A47vX56Et2fgweO4oAl2bzFuyvlmv9zoCllXzvLOAn5gn5WA |
openUrl | ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=PHYLOGENY+OF+THE+GENUS+CHLOROCOCCUM+%3A+A+STUDY+OF+18S+AND+26S+rRNA+GENE+SEQUENCES&rft.jtitle=Journal+of+phycology&rft.au=Michalopulos%2C+J.U.&rft.au=Buchheim%2C+J.A.&rft.au=Buchheim&rft.date=2000-12-01&rft.issn=0022-3646&rft.eissn=1529-8817&rft.volume=36&rft.issue=s3&rft.spage=47&rft.epage=47&rft_id=info:doi/10.1046%2Fj.1529-8817.1999.00001-140.x&rft.externalDBID=n%2Fa&rft.externalDocID=10_1046_j_1529_8817_1999_00001_140_x |
thumbnail_l | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/lc.gif&issn=0022-3646&client=summon |
thumbnail_m | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/mc.gif&issn=0022-3646&client=summon |
thumbnail_s | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/sc.gif&issn=0022-3646&client=summon |