IRscope: an online program to visualize the junction sites of chloroplast genomes
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Published in | Bioinformatics (Oxford, England) Vol. 34; no. 17; pp. 3030 - 3031 |
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Main Authors | , , |
Format | Journal Article |
Language | English |
Published |
01.09.2018
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Online Access | Get full text |
ISSN | 1367-4803 1367-4811 |
DOI | 10.1093/bioinformatics/bty220. |
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Author | Poczai, Peter Amiryousefi, Ali Hyvönen, Jaakko |
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Cites_doi | 10.1016/0005-2787(76)90338-5 10.1111/j.1365-313X.2007.03326.x 10.1016/j.jmb.2003.11.020 10.1007/s11427-012-4430-8 10.3732/ajb.1500299 10.1093/bioinformatics/bth352 10.1093/nar/gkh458 10.1038/301092a0 10.1007/s00294-007-0161-y |
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References | Li (2023061313384203900_bty220-B3) 2013; 56 Lohse (2023061313384203900_bty220-B4) 2007; 52 Lyons (2023061313384203900_bty220-B5) 2008; 53 Palmer (2023061313384203900_bty220-B7) 1983; 301 Walker (2023061313384203900_bty220-B9) 2015; 102 Wyman (2023061313384203900_bty220-B10) 2004; 20 Frazer (2023061313384203900_bty220-B1) 2004; 32 Oldenburg (2023061313384203900_bty220-B6) 2004; 335 Kolodner (2023061313384203900_bty220-B2) 1976; 447 |
References_xml | – volume: 447 start-page: 144 year: 1976 ident: 2023061313384203900_bty220-B2 article-title: Physical studies on the size and structure of the covalently closed circular chloroplast DNA from higher plants publication-title: Biochim. Biophys. Acta doi: 10.1016/0005-2787(76)90338-5 – volume: 53 start-page: 661 year: 2008 ident: 2023061313384203900_bty220-B5 article-title: How to usefully compare homologous plant genes and chromosomes as DNA sequences publication-title: Plant J doi: 10.1111/j.1365-313X.2007.03326.x – volume: 335 start-page: 953 year: 2004 ident: 2023061313384203900_bty220-B6 article-title: Most chloroplast DNA of maze seedlings in linear molecules with defined ends and branched forms publication-title: J. Mol. Biol doi: 10.1016/j.jmb.2003.11.020 – volume: 56 start-page: 189 year: 2013 ident: 2023061313384203900_bty220-B3 article-title: Complete chloroplast genome sequence of Magnolia grandiflora and comparative analysis with related species publication-title: Sci. China. Life Sci doi: 10.1007/s11427-012-4430-8 – volume: 102 start-page: 1751 year: 2015 ident: 2023061313384203900_bty220-B9 article-title: Sources of inversion variation in the small single copy (SSC) region of chloroplast genomes publication-title: Am. J. Botany doi: 10.3732/ajb.1500299 – volume: 20 start-page: 3252 year: 2004 ident: 2023061313384203900_bty220-B10 article-title: Automatic annotation of organellar genomes with DOGMA publication-title: Bioinformatics doi: 10.1093/bioinformatics/bth352 – volume: 32 start-page: W273 year: 2004 ident: 2023061313384203900_bty220-B1 article-title: VISTA: computational tools for comparative genomics publication-title: Nucleic Acids Res doi: 10.1093/nar/gkh458 – volume: 301 start-page: 92 year: 1983 ident: 2023061313384203900_bty220-B7 article-title: Chloroplast DNA exists in two orientations publication-title: Nature doi: 10.1038/301092a0 – volume: 52 start-page: 267 year: 2007 ident: 2023061313384203900_bty220-B4 article-title: OrganellarGenomeDRAW (OGDRAW)—a tool for the easy generation of high-quality custom graphical maps of plastid and mitochondrial genomes publication-title: Curr. Genet doi: 10.1007/s00294-007-0161-y |
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Title | IRscope: an online program to visualize the junction sites of chloroplast genomes |
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