A computational analysis revealed BES1 transcription factor and β-amylase as crosstalk elements in Upland cotton species (Gossypium sp.)
Cotton is a resilient and multipurpose crop, meeting major of the world’s textile needs while also yielding byproducts like edible oil and animal feed. Starch plays a crucial role in cotton fabric production. It enhances fabric strength by forming a protective film around cotton fibers, making them...
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Published in | Scientia Agropecuaria Vol. 15; no. 3; pp. 449 - 460 |
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Main Authors | , , , , , |
Format | Journal Article |
Language | English |
Published |
02.09.2024
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Abstract | Cotton is a resilient and multipurpose crop, meeting major of the world’s textile needs while also yielding byproducts like edible oil and animal feed. Starch plays a crucial role in cotton fabric production. It enhances fabric strength by forming a protective film around cotton fibers, making them more resistant to wear and tear. BES1 (brassinosteroid insensitive 1) is a key regulator in brassinosteroid signaling. It controls thousands of target genes involved in development processes. Interestingly, two β-amylase proteins (BAM7 and BAM8) are part of the BES1 family, despite their primary function as β-amylases. β-Amylase (BAM) and BES1 are two gene families with functional and regulatory roles in controlling shoot growth and development by mediating brassinosteroid effects. They share similar domains and participate in various biological processes, tolerance and responses to stresses like salt and drought. In a computational analysis comparing Arabidopsis and Gossypium species, BAM and BES1 were characterized. BES1 genes were grouped into four clusters based on the comparison of the two species. Two clusters corresponded to BAM7 and BAM8, while the other two clusters were associated with BES1. The conserved nucleotide domain sequence is GCTGGATGG. Short tandem repeats include TG and TTG, which can serve as molecular markers. BES1 is specifically linked to cellulose and fiber production and holds promise as a candidate for plant selection and breeding in Gossypium (cotton). |
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AbstractList | Cotton is a resilient and multipurpose crop, meeting major of the world’s textile needs while also yielding byproducts like edible oil and animal feed. Starch plays a crucial role in cotton fabric production. It enhances fabric strength by forming a protective film around cotton fibers, making them more resistant to wear and tear. BES1 (brassinosteroid insensitive 1) is a key regulator in brassinosteroid signaling. It controls thousands of target genes involved in development processes. Interestingly, two β-amylase proteins (BAM7 and BAM8) are part of the BES1 family, despite their primary function as β-amylases. β-Amylase (BAM) and BES1 are two gene families with functional and regulatory roles in controlling shoot growth and development by mediating brassinosteroid effects. They share similar domains and participate in various biological processes, tolerance and responses to stresses like salt and drought. In a computational analysis comparing Arabidopsis and Gossypium species, BAM and BES1 were characterized. BES1 genes were grouped into four clusters based on the comparison of the two species. Two clusters corresponded to BAM7 and BAM8, while the other two clusters were associated with BES1. The conserved nucleotide domain sequence is GCTGGATGG. Short tandem repeats include TG and TTG, which can serve as molecular markers. BES1 is specifically linked to cellulose and fiber production and holds promise as a candidate for plant selection and breeding in Gossypium (cotton). |
Author | Heredia-Pinos, Marcos Raúl Villamar-Torres, Ronald Oswaldo Mestanza Uquillas, Camilo Alexander Robin Viot, Christopher Mehdi Jazayeri, Seyed Chévez-Vera, Héctor David |
Author_xml | – sequence: 1 givenname: Ronald Oswaldo surname: Villamar-Torres fullname: Villamar-Torres, Ronald Oswaldo – sequence: 2 givenname: Camilo Alexander surname: Mestanza Uquillas fullname: Mestanza Uquillas, Camilo Alexander – sequence: 3 givenname: Héctor David surname: Chévez-Vera fullname: Chévez-Vera, Héctor David – sequence: 4 givenname: Marcos Raúl surname: Heredia-Pinos fullname: Heredia-Pinos, Marcos Raúl – sequence: 5 givenname: Christopher surname: Robin Viot fullname: Robin Viot, Christopher – sequence: 6 givenname: Seyed surname: Mehdi Jazayeri fullname: Mehdi Jazayeri, Seyed |
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Title | A computational analysis revealed BES1 transcription factor and β-amylase as crosstalk elements in Upland cotton species (Gossypium sp.) |
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