OpenGeoSys: an open-source initiative for numerical simulation of thermo-hydro-mechanical/chemical (THM/C) processes in porous media

In this paper we describe the OpenGeoSys (OGS) project, which is a scientific open-source initiative for numerical simulation of thermo-hydro-mechanical-chemical processes in porous media. The basic concept is to provide a flexible numerical framework (using primarily the Finite Element Method (FEM)...

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Published inEnvironmental earth sciences Vol. 67; no. 2; pp. 589 - 599
Main Authors Kolditz, O., Bauer, S., Bilke, L., Böttcher, N., Delfs, J. O., Fischer, T., Görke, U. J., Kalbacher, T., Kosakowski, G., McDermott, C. I., Park, C. H., Radu, F., Rink, K., Shao, H., Shao, H. B., Sun, F., Sun, Y. Y., Singh, A. K., Taron, J., Walther, M., Wang, W., Watanabe, N., Wu, Y., Xie, M., Xu, W., Zehner, B.
Format Journal Article
LanguageEnglish
Published Berlin/Heidelberg Springer-Verlag 01.09.2012
Springer Nature B.V
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Abstract In this paper we describe the OpenGeoSys (OGS) project, which is a scientific open-source initiative for numerical simulation of thermo-hydro-mechanical-chemical processes in porous media. The basic concept is to provide a flexible numerical framework (using primarily the Finite Element Method (FEM)) for solving multifield problems in porous and fractured media for applications in geoscience and hydrology. To this purpose OGS is based on an object-oriented FEM concept including a broad spectrum of interfaces for pre- and postprocessing. The OGS idea has been in development since the mid-eighties. We provide a short historical note about the continuous process of concept and software development having evolved through Fortran, C, and C++ implementations. The idea behind OGS is to provide an open platform to the community, outfitted with professional software-engineering tools such as platform-independent compiling and automated benchmarking. A comprehensive benchmarking book has been prepared for publication. Benchmarking has been proven to be a valuable tool for cooperation between different developer teams, for example, for code comparison and validation purposes (DEVOVALEX and CO 2 BENCH projects). On one hand, object-orientation (OO) provides a suitable framework for distributed code development; however, the parallelization of OO codes still lacks efficiency. High-performance-computing efficiency of OO codes is subject to future research.
AbstractList In this paper we describe the OpenGeoSys (OGS) project, which is a scientific open-source initiative for numerical simulation of thermo-hydro-mechanical-chemical processes in porous media. The basic concept is to provide a flexible numerical framework (using primarily the Finite Element Method (FEM)) for solving multifield problems in porous and fractured media for applications in geoscience and hydrology. To this purpose OGS is based on an object-oriented FEM concept including a broad spectrum of interfaces for pre- and postprocessing. The OGS idea has been in development since the mid-eighties. We provide a short historical note about the continuous process of concept and software development having evolved through Fortran, C, and C++ implementations. The idea behind OGS is to provide an open platform to the community, outfitted with professional software-engineering tools such as platform-independent compiling and automated benchmarking. A comprehensive benchmarking book has been prepared for publication. Benchmarking has been proven to be a valuable tool for cooperation between different developer teams, for example, for code comparison and validation purposes (DEVOVALEX and CO 2 BENCH projects). On one hand, object-orientation (OO) provides a suitable framework for distributed code development; however, the parallelization of OO codes still lacks efficiency. High-performance-computing efficiency of OO codes is subject to future research.
In this paper we describe the OpenGeoSys (OGS) project, which is a scientific open-source initiative for numerical simulation of thermo-hydro-mechanical-chemical processes in porous media. The basic concept is to provide a flexible numerical framework (using primarily the Finite Element Method (FEM)) for solving multifield problems in porous and fractured media for applications in geoscience and hydrology. To this purpose OGS is based on an object-oriented FEM concept including a broad spectrum of interfaces for pre- and postprocessing. The OGS idea has been in development since the mid-eighties. We provide a short historical note about the continuous process of concept and software development having evolved through Fortran, C, and C++ implementations. The idea behind OGS is to provide an open platform to the community, outfitted with professional software-engineering tools such as platform-independent compiling and automated benchmarking. A comprehensive benchmarking book has been prepared for publication. Benchmarking has been proven to be a valuable tool for cooperation between different developer teams, for example, for code comparison and validation purposes (DEVOVALEX and CO(2) BENCH projects). On one hand, object-orientation (OO) provides a suitable framework for distributed code development; however, the parallelization of OO codes still lacks efficiency. High-performance-computing efficiency of OO codes is subject to future research.
In this paper we describe the OpenGeoSys (OGS) project, which is a scientific open-source initiative for numerical simulation of thermo-hydro-mechanical-chemical processes in porous media. The basic concept is to provide a flexible numerical framework (using primarily the Finite Element Method (FEM)) for solving multifield problems in porous and fractured media for applications in geoscience and hydrology. To this purpose OGS is based on an object-oriented FEM concept including a broad spectrum of interfaces for pre- and postprocessing. The OGS idea has been in development since the mid-eighties. We provide a short historical note about the continuous process of concept and software development having evolved through Fortran, C, and C++ implementations. The idea behind OGS is to provide an open platform to the community, outfitted with professional software-engineering tools such as platform-independent compiling and automated benchmarking. A comprehensive benchmarking book has been prepared for publication. Benchmarking has been proven to be a valuable tool for cooperation between different developer teams, for example, for code comparison and validation purposes (DEVOVALEX and CO sub(2) BENCH projects). On one hand, object-orientation (OO) provides a suitable framework for distributed code development; however, the parallelization of OO codes still lacks efficiency. High-performance-computing efficiency of OO codes is subject to future research.
Issue Title: Topical Issue: CLEAN - Enhanced gas recovery storage and geological CO2 storage In this paper we describe the OpenGeoSys (OGS) project, which is a scientific open-source initiative for numerical simulation of thermo-hydro-mechanical-chemical processes in porous media. The basic concept is to provide a flexible numerical framework (using primarily the Finite Element Method (FEM)) for solving multifield problems in porous and fractured media for applications in geoscience and hydrology. To this purpose OGS is based on an object-oriented FEM concept including a broad spectrum of interfaces for pre- and postprocessing. The OGS idea has been in development since the mid-eighties. We provide a short historical note about the continuous process of concept and software development having evolved through Fortran, C, and C++ implementations. The idea behind OGS is to provide an open platform to the community, outfitted with professional software-engineering tools such as platform-independent compiling and automated benchmarking. A comprehensive benchmarking book has been prepared for publication. Benchmarking has been proven to be a valuable tool for cooperation between different developer teams, for example, for code comparison and validation purposes (DEVOVALEX and CO2 BENCH projects). On one hand, object-orientation (OO) provides a suitable framework for distributed code development; however, the parallelization of OO codes still lacks efficiency. High-performance-computing efficiency of OO codes is subject to future research.[PUBLICATION ABSTRACT]
Author Kosakowski, G.
Singh, A. K.
Park, C. H.
Bilke, L.
Wu, Y.
Xie, M.
Kalbacher, T.
Sun, Y. Y.
Görke, U. J.
Taron, J.
Sun, F.
Fischer, T.
Xu, W.
Delfs, J. O.
Walther, M.
Shao, H. B.
McDermott, C. I.
Böttcher, N.
Zehner, B.
Bauer, S.
Rink, K.
Wang, W.
Watanabe, N.
Radu, F.
Shao, H.
Kolditz, O.
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References_xml – reference: ZehnerBWatanabeNKolditzOVisualization of gridded scalar data with uncertainty in geosciencesComput Geosci201036101268127510.1016/j.cageo.2010.02.010
– reference: CacaceMKaiserBLewerenzBGeothermal energy in sedimentary basins: what we can learn from regional numerical modelsChemie der Erde Geochem2010703334610.1016/j.chemer.2010.05.017
– reference: Thorenz C (2001) Model adaptive simulation of multiphase and density driven flow in fractured and porous media. PhD Thesis, Institute of Fluid Mechanics, Hannover University
– reference: Watanabe N (2012) Finite element method for coupled thermo-hydro-mechanical processes in discretely fractured and non-fractured porous media. PhD Thesis, Technische Universität Dresden, Chair of Applied Environmental System Analysis, Helmholtz Centre for Environmental Research UFZ, Department of Environmental Informatics
– reference: Chen C (2006) Integrating GIS methods for the analysis of geosystems. PhD Thesis, GeoHydrology and HydroInformatics, Center for Applied Geosciences, Tuebingen University
– reference: Kolditz O (1990) Zur Modellierung und Simulation geothermischer Transportprozesse in untertägigen Zirkulationssystemen. Dissertation, Akademie der Wissenschaften der DDR, Berlin
– reference: Rink K, Kalbacher T, Kolditz O (2011) Visual data management for hydrological analysis. Environ. Earth Sci. doi:10.1007/s12665-011-1230-6
– reference: MayerKMacQuarrieKSolution of the MoMaS reactive transport benchmark with MIN3P-model formulation and simulation resultsComput Geosci201014340541910.1007/s10596-009-9158-6
– reference: Kohlmeier M (2006) Coupling of thermal, hydraulic and mechanical processes for geotechnical simulations of partially saturated porous media. PhD Thesis, Institute of Fluid Mechanics, Hannover University
– reference: Habbar A (2001) Direkte und inverse Modellierung reaktiver Transportprozesse in klüftig-porösen medien. PhD Thesis, Institute of Fluid Mechanics, Hannover University
– reference: XuTSonnenthalESpycherNPruessKTOUGHREACT—a simulation program for non-isothermal multiphase reactive geochemical transport in variably saturated geologic media: applications to geothermal injectivity and CO2 geological sequestrationComput Geosci200632214516510.1016/j.cageo.2005.06.014
– reference: KolditzOModelling flow and heat transfer in fractured rocks: conceptual model of a 3-d deterministic fracture networkGeothermics199524345147010.1016/0375-6505(95)00020-Q
– reference: Sun F (2011) Computational hydrosystem analysis: Applications to the meijiang and nankou catchments in china. PhD Thesis, Technische Universität Dresden, Chair of Applied Environmental System Analysis, Helmholtz Centre for Environmental Research UFZ, Department of Environmental Informatics
– reference: Walsh R (2007) Numerical modeling of THM coupled processes in fractured porous media. PhD Thesis, GeoHydrology and HydroInformatics, Center for Applied Geosciences, Tuebingen University
– reference: Kalbacher T (2006) Geometric modelling and 3-d visualization of hydrogeological systems: software designing and application. PhD Thesis, GeoHydrology and HydroInformatics, Center for Applied Geosciences, Tuebingen University
– reference: PruessKThe TOUGH codes—a family of simulation tools for multiphase flow and transport processes in permeable mediaVadose Zone J200433738746
– reference: Barlag C (1997) Adaptive Methoden zur Modellierung von Stofftransport im Kluftgestein. PhD Thesis, Institute of Fluid Mechanics, Hannover University
– reference: KolditzORatkeRDierschHZielkeWCoupled groundwater flow and transport: 1. Verification of variable density flow and transport modelsAdv Water Resour1998211274610.1016/S0309-1708(96)00034-6
– reference: KolditzODelfsJOBürgerCBeinhornMParkCHNumerical analysis of coupled hydrosystems based on an object-oriented compartment approachJ Hydroinform200810322724410.2166/hydro.2008.003
– reference: DierschHFinite-element modeling of recirculating density-driven saltwater intrusion processes in groundwaterAdv Water Resour1988111254310.1016/0309-1708(88)90019-X
– reference: Kroehn K (1991) Simulation von Transportvorgaengen im klueftigen Gestein mit der Methode der Finiten Elemente. PhD Thesis, Institute of Fluid Mechanics, Hannover University
– reference: Shao H (2010) Modelling reactive transport processes in porous media. PhD Thesis, Technische Universität Dresden, Chair of Applied Environmental System Analysis, Helmholtz Centre for Environmental Research UFZ, Department of Environmental Informatics
– reference: WangWRutqvistJGörkeUJBirkholzerJKolditzONon-isothermal flow in low permeable porous media: a comparison of Richards’ and two-phase flow approachesEnviron Earth Sci20116261197120710.1007/s12665-010-0608-1
– reference: McDermott C (2006) Reservoir engineering and system analysis: hydraulic, thermal and geomechanical coupled processes in geosystems. Habilitation: GeoHydrology and HydroInformatics, Center for Applied Geosciences, Tuebingen University
– reference: de Jonge J (2004) Contributions to computational geotechnics: Non-isothermal flow in low-permeable porous media. PhD Thesis, GeoHydrology and HydroInformatics, Center for Applied Geosciences, Tuebingen University
– reference: Gronewold J (2006) Entwicklung eines Internet-Informationssystems zur Modellierung natuerlicher Rueckhalte- und Abbauprozesse im Grundwasser. PhD Thesis, GeoHydrology and HydroInformatics, Center for Applied Geosciences, Tuebingen University
– reference: PiggottABobbaAXiangJInverse analysis implementation of the SUTRA groundwater modelGround Water199432582983610.1111/j.1745-6584.1994.tb00924.x
– reference: KalbacherTSchneiderCWangWHildebrandtAAttingerSKolditzOParallelized modelling of soil-coupled 3d water uptake of multiple root systems with automatic adaptive time step controlVadose Zone J2011101910.2136/vzj2011.0006
– reference: Moenickes S (2004) Grid generation for simulation of flow and transport processes in fractured porous media. PhD Thesis, Institute of Fluid Mechanics, Hannover University
– reference: Wollrath J (1990) Ein Stroemungs- und Transportmodell fuer klueftiges Gestein und Untersuchungen zu homogenen Ersatzsystemen. PhD Thesis, Institute of Fluid Mechanics, Hannover University
– reference: GörkeUJParkCHWangWSinghAKolditzONumerical simulation of multiphase hydromechanical processes induced by CO2 injection in deep saline aquifersOil Gas Sci Technol201148115
– reference: BloecherGZimmermannGSettle3D—a numerical generator for artificial porous mediaComput Geosci200834121827184210.1016/j.cageo.2007.12.008
– reference: FreibothSClassHHelmigRA model for multiphase flow and transport in porous media including a phenomenological approach to account for deformation—a model concept and its validation within a code intercomparison studyComput Geosci200913328130010.1007/s10596-008-9118-6
– reference: Kolditz O (1996) Stoff- und Waermetransport im Kluftgestein. Habilitation: Institute of Fluid Mechanics, Hannover University
– reference: WangWKolditzOObject-oriented finite element analysis of thermo-hydro-mechanical (thm) problems in porous mediaInt J Numer Methods Eng200769116220110.1002/nme.1770
– reference: ReevesHThibodeauPUnderwoodRIncorporation of total stress changes into the ground water model SUTRAGround Water2000381899810.1111/j.1745-6584.2000.tb00205.x
– reference: Beyer C (2007) Applied numerical modeling of saturated / unsaturated flow and reactive contaminant transport: evaluation of site investigation strategies and assessment of environmental impact. PhD Thesis, GeoHydrology and HydroInformatics, Center for Applied Geosciences, Tuebingen University
– reference: Engelhardt I (2003) Experimental and numerical investigations with respect to the material properties of geotechnical barriers. PhD Thesis, Tuebingen University
– reference: Delfs JO (2010) An Euler-Lagrangian concept for transport processes in coupled hydrosystems. PhD Thesis, GeoHydrology and HydroInformatics, Center for Applied Geosciences, Tuebingen University in cooperation with Helmholtz Centre for Environmental Research UFZ and Technische Universität Dresden
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Snippet In this paper we describe the OpenGeoSys (OGS) project, which is a scientific open-source initiative for numerical simulation of...
Issue Title: Topical Issue: CLEAN - Enhanced gas recovery storage and geological CO2 storage In this paper we describe the OpenGeoSys (OGS) project, which is a...
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SubjectTerms Biogeosciences
Carbon dioxide
Carbon sequestration
computer software
Earth and Environmental Science
Earth Sciences
Environmental Science and Engineering
Geochemistry
Geology
Geophysics
Hydrology
Hydrology/Water Resources
mathematical models
Open source software
Porosity
Porous media
Simulation
Special Issue
teams
Terrestrial Pollution
Thermodynamics
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Title OpenGeoSys: an open-source initiative for numerical simulation of thermo-hydro-mechanical/chemical (THM/C) processes in porous media
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