A perspective on applied geochemistry in porous media: Reactive transport modeling of geochemical dynamics and the interplay with flow phenomena and physical alteration

In many practical geochemical systems that are at the center of providing indispensable energy, resources and service to our society, (bio)geochemical reactions are coupled with other physical processes, such as multiphase flow, fracturing and deformation. Predictive understanding of these processes...

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Published inApplied geochemistry Vol. 146; p. 105445
Main Authors Deng, Hang, Gharasoo, Mehdi, Zhang, Liwei, Dai, Zhenxue, Hajizadeh, Alireza, Peters, Catherine A., Soulaine, Cyprien, Thullner, Martin, Van Cappellen, Philippe
Format Journal Article
LanguageEnglish
Published Elsevier Ltd 01.11.2022
Elsevier
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Abstract In many practical geochemical systems that are at the center of providing indispensable energy, resources and service to our society, (bio)geochemical reactions are coupled with other physical processes, such as multiphase flow, fracturing and deformation. Predictive understanding of these processes in hosting and evolving porous media is the key to design reliable and sustainable practices. In this article, we provide a brief review of recent developments and applications of reactive transport modeling to study geochemically driven processes and alteration in porous media. We also provide a perspective on opportunities and challenges for continuously developing and expanding the role of this valuable methodology to advance fundamental understanding and transferable knowledge of various dynamic geochemical systems.
AbstractList In many practical geochemical systems that are at the center of providing indispensable energy, resources and service to our society, (bio)geochemical reactions are coupled with other physical processes, such as multiphase flow, fracturing and deformation. Predictive understanding of these processes in hosting and evolving porous media is the key to design reliable and sustainable practices. In this article, we provide a brief review of recent developments and applications of reactive transport modeling to study geochemically driven processes and alteration in porous media. We also provide a perspective on opportunities and challenges for continuously developing and expanding the role of this valuable methodology to advance fundamental understanding and transferable knowledge of various dynamic geochemical systems.
ArticleNumber 105445
Author Zhang, Liwei
Thullner, Martin
Hajizadeh, Alireza
Peters, Catherine A.
Dai, Zhenxue
Soulaine, Cyprien
Gharasoo, Mehdi
Deng, Hang
Van Cappellen, Philippe
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  givenname: Hang
  orcidid: 0000-0001-5784-996X
  surname: Deng
  fullname: Deng, Hang
  email: hangdeng@pku.edu.cn
  organization: Department of Energy and Resources Engineering, College of Engineering, Peking University, Beijing, 100871, China
– sequence: 2
  givenname: Mehdi
  surname: Gharasoo
  fullname: Gharasoo, Mehdi
  email: mehdi.gharasoo@uwaterloo.ca
  organization: Department of Earth and Environmental Sciences, University of Waterloo, Ontario, Canada
– sequence: 3
  givenname: Liwei
  orcidid: 0000-0002-1015-5132
  surname: Zhang
  fullname: Zhang, Liwei
  email: lwzhang@whrsm.ac.cn
  organization: State Key Laboratory of Geomechanics and Geotechnical Engineering, Institute of Rock and Soil Mechanics, Chinese Academy of Sciences, Wuhan, Hubei, China
– sequence: 4
  givenname: Zhenxue
  surname: Dai
  fullname: Dai, Zhenxue
  organization: College of Construction Engineering, Jilin University, Changchun, 130026, China
– sequence: 5
  givenname: Alireza
  surname: Hajizadeh
  fullname: Hajizadeh, Alireza
  organization: Petroleum Engineering Department, PETRONAS, Kuala Lumpur, Malaysia
– sequence: 6
  givenname: Catherine A.
  surname: Peters
  fullname: Peters, Catherine A.
  organization: Department of Civil and Environmental Engineering, Princeton University, Princeton, NJ, USA, 08544
– sequence: 7
  givenname: Cyprien
  orcidid: 0000-0002-6151-3286
  surname: Soulaine
  fullname: Soulaine, Cyprien
  organization: Earth Sciences Institute of Orléans, CNRS, Université d’Orléans, BRGM, 45100, Orléans, France
– sequence: 8
  givenname: Martin
  orcidid: 0000-0001-9723-4601
  surname: Thullner
  fullname: Thullner, Martin
  organization: Federal Institute for Geosciences and Natural Resources (BGR), Hannover, Germany
– sequence: 9
  givenname: Philippe
  surname: Van Cappellen
  fullname: Van Cappellen, Philippe
  organization: Department of Earth and Environmental Sciences, University of Waterloo, Ontario, Canada
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Cites_doi 10.1016/j.chemgeo.2015.10.023
10.1016/j.jhydrol.2014.06.045
10.1002/2012WR013483
10.1002/ese3.817
10.1016/j.envsoft.2011.10.010
10.1016/j.chemgeo.2018.10.016
10.1016/j.cageo.2013.08.005
10.1007/s11242-018-1181-4
10.1016/S0169-7722(01)00153-X
10.1021/acs.est.0c05142
10.1111/j.1365-2486.2011.02546.x
10.1002/vzj2.20087
10.1016/j.apenergy.2016.06.051
10.1073/pnas.1221373110
10.1063/1.4921611
10.1007/s11242-020-01412-1
10.1016/j.advwatres.2011.01.012
10.1007/s11242-019-01266-2
10.1016/j.advwatres.2016.05.020
10.1016/j.soilbio.2013.11.019
10.1023/A:1016030112089
10.1016/j.compgeo.2016.01.002
10.1016/j.chemgeo.2012.05.014
10.1007/s11242-016-0690-2
10.1007/s11242-012-0028-7
10.1021/es5058538
10.1021/acs.energyfuels.9b01918
10.1029/2019WR024712
10.1029/2006WR005664
10.1016/j.petrol.2014.08.020
10.1016/j.gca.2020.07.019
10.1007/s11242-021-01577-3
10.1063/1.1745010
10.1007/s11004-012-9431-4
10.1016/j.gca.2018.08.005
10.1007/s10596-018-9773-1
10.1016/j.apgeochem.2021.105028
10.2136/vzj2012.0079
10.1016/j.micromeso.2011.09.031
10.1021/acs.est.7b06599
10.1002/bit.23183
10.1016/j.advwatres.2013.08.010
10.1016/0166-6622(89)80148-9
10.1016/j.ijggc.2015.11.005
10.1080/10643389.2011.574101
10.1016/j.apgeochem.2021.105050
10.1038/s41598-021-82807-y
10.1002/2016RG000524
10.1007/978-1-4020-3610-1_89
10.1016/j.gca.2017.02.006
10.1029/2019WR025153
10.1002/2016JB013321
10.1515/johh-2017-0049
10.1089/ees.2017.0197
10.1016/j.advwatres.2005.10.011
10.1016/j.advwatres.2017.10.032
10.1016/j.earscirev.2016.02.001
10.1017/jfm.2017.499
10.1109/MCSE.2016.49
10.1016/S0309-1708(02)00044-1
10.1016/j.ijheatfluidflow.2013.01.020
10.1016/j.ijggc.2016.12.011
10.1016/j.ijggc.2012.02.006
10.2118/135261-PA
10.3389/frwa.2022.780297
10.1007/s11242-009-9412-3
10.1016/j.geothermics.2012.08.002
10.1080/10889869991219352
10.2138/rmg.2015.80.08
10.1039/b804680h
10.1016/j.advwatres.2013.05.007
10.1002/ghg.1728
10.1016/j.advwatres.2012.07.018
10.5194/bg-19-665-2022
10.1029/2008JB006122
10.1089/ees.2021.0009
10.1007/s10596-019-09903-x
10.1016/j.ces.2018.06.026
10.1021/acs.est.2c01433
10.1016/j.cageo.2019.01.006
10.1016/j.ijggc.2019.06.026
10.2118/116110-PA
10.1016/j.advwatres.2015.07.023
10.1016/j.chemgeo.2018.10.008
10.1016/j.jcp.2019.07.047
10.1029/2011WR011192
10.1029/2020WR028483
10.1007/s11242-021-01613-2
10.1097/SS.0b013e318241105d
10.5194/gmd-8-3333-2015
10.1016/j.advwatres.2009.07.007
10.1016/j.scitotenv.2018.06.365
10.1002/bit.21708
10.1016/j.chemgeo.2015.03.014
10.2138/rmg.2019.85.3
10.1016/j.jconhyd.2010.01.001
10.1016/j.jconhyd.2010.09.012
10.1016/j.jhydrol.2018.04.007
10.1007/s12665-012-1546-x
10.1029/2019JB017805
10.1007/BF01036523
10.1017/S0022112002007735
10.1016/S1359-0294(01)00088-7
10.1016/j.chemosphere.2012.10.105
10.2136/vzj2011.0204
10.1016/j.envsoft.2017.09.005
10.1016/j.ijggc.2017.05.009
10.1016/0016-7037(96)00140-8
10.1007/s10596-020-10012-3
10.1007/s11242-004-5468-2
10.2138/rmg.2018.85.13
10.1007/s11242-021-01680-5
10.1016/j.advwatres.2012.03.003
10.1016/j.jconhyd.2017.09.005
10.1016/j.apgeochem.2020.104861
10.1016/j.earscirev.2013.04.003
10.1016/j.chemgeo.2008.11.014
10.1016/j.jngse.2018.12.018
10.1016/j.conbuildmat.2018.05.200
10.3389/frwa.2021.643714
10.1021/ef401446f
10.1016/j.jconhyd.2017.04.002
10.1029/2004WR003500
10.1007/BF02120313
10.1016/j.advwatres.2011.06.003
10.1007/s11242-016-0701-3
10.1021/acs.est.6b02797
10.1002/2013WR013737
10.1016/j.apgeochem.2022.105207
10.1016/j.jpowsour.2009.11.125
10.1007/s11242-015-0556-z
10.1038/s41598-018-33502-y
10.1007/s10533-013-9851-3
10.1016/S0017-9310(03)00301-6
10.1016/j.ijggc.2012.06.007
10.1016/j.cageo.2010.03.007
10.1016/j.cageo.2009.06.009
10.2138/rmg.2015.80.07
10.1073/pnas.1901619116
10.1007/s11242-021-01661-8
10.1029/2020WR027585
10.1016/j.cageo.2019.01.009
10.1016/j.jconhyd.2017.03.002
10.1002/ppsc.200601009
10.1063/1.168744
10.1016/j.advwatres.2016.11.017
10.1016/j.jcis.2020.02.044
10.1111/ejss.13142
10.1111/gwat.12179
10.1021/acs.est.8b02498
10.1007/s11242-010-9636-2
10.1016/j.advwatres.2018.10.004
10.1007/s00791-019-00316-y
10.1029/2021WR029959
10.1615/IntJMultCompEng.v7.i6.40
10.1023/A:1006560705680
10.2138/rmg.2015.80.12
10.1016/j.jcp.2015.04.054
10.1016/j.apgeochem.2021.104998
10.1016/j.watres.2019.04.001
10.1029/2006WR005695
10.1029/2001WR000310
10.1007/s11242-021-01654-7
10.1016/j.jconhyd.2009.10.006
10.1016/j.gca.2005.04.026
10.1016/j.gca.2005.09.001
10.1016/j.ijggc.2009.11.006
10.1016/j.apgeochem.2003.11.003
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Keywords Porous media
Reactive transport modeling
Multi-scale
Coupled processes
Geochemical dynamics
reactive transport modeling
coupled processes
multi-scale
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References Xiong, Hou, Tan, Luo, Yue, Wu (bib193) 2021
Seetha, Raoof, Kumar, Majid Hassanizadeh (bib147) 2017; 200
Yoon, Valocchi, Werth, Dewers (bib198) 2012
Deng, Molins, Trebotich, Steefel, DePaolo (bib38) 2018; 239
Dávila, Luquot, Soler, Cama (bib35) 2016; 48
Golparvar, Kästner, Thullner (bib63) 2021; 20
Alt-Epping, Waber, Diamond, Eichinger (bib5) 2013; 45
Kim, Florence, Ling, Plattenberger, Andres, Peters (bib86) 2022; 136
Genuchten (bib54) 1980
Sprocati, Rolle (bib160) 2021; 57
Zhang, Ma, Yin, Wallace, Reza Soltanian, Dai, Ritzi, Ma, Zhan, Xiaoshu (bib205) 2021; 303
Berkowitz, Dror, Hansen, Harvey (bib16) 2016; 54
Xiao, McPherson, Bordelon, Viswanathan, Dai, Tian, Esser, Jia, Carey (bib191) 2017
Soulaine, Roman, Anthony, Hamdi, Tchelepi (bib155) 2017
Khaled, Vafai (bib83) 2003; 46
Raoof, Majid Hassanizadeh (bib137) 2010
Raeini (bib133) 2013
Li, Peters, Celia (bib94) 2006; 29
Maes, Menke (bib102) 2021; 139
Molins, Soulaine, Prasianakis, Abbasi, Poncet, Anthony, Ladd, Starchenko (bib111) 2021; 25
Liu, Zhang, Albert, Valocchi (bib98) 2015; 27
Lopez-Peña, Luis, Meulenbroek, Vermolen (bib99) 2018; 22
Khurana, Falk, Hildebrandt, Thullner (bib84) 2022
Starchenko (bib162) 2022; 3
Dahle, Celia (bib31) 1999; 3
Raeini, Bijeljic, Blunt (bib135) 2018; 97
Spycher, María Llanos, Vu, Haese (bib161) 2019
Zhao, MacMinn, Primkulov, Chen, Valocchi, Zhao, Kang (bib206) 2019; 116
Abadie, Aubin, Legendre (bib1) 2015; 297
Zhu, Song, Yang, Lu, Liu, Zhang, Sun, Yao (bib208) 2021
Khurana, Falk, Hildebrandt, Thullner (bib85) 2022
Szymczak, Ladd (bib170) 2009
Guo, Lin, Hamdi, Tchelepi (bib65) 2018
Carrillo, Soulaine, Bourg (bib25) 2022; 161
Rabbani, Ayatollahi, Kharrat, Dashti (bib132) 2016
Al-Kharusi, Blunt (bib4) 2008; 44
Dashtian, Bakhshian, Hajirezaie, Nicot (bib33) 2019; 125
Hajizadeh, Safekordi, Farhadpour (bib68) 2011
Li (bib92) 2019; 85
Ellis, Crandell, Peters (bib48) 2010; 4
Steefel, Beckingham, Gautier (bib165) 2015
Maes, Geiger (bib101) 2018; 111
White, Brantley (bib188) 1995
Barry, Prommer, Miller, Engesgaard, Brun, Zheng (bib9) 2002; 25
White, Spane, Todd Schaef, Quin, Mark, Jake, Peter McGrail (bib189) 2020; 54
Yoon, Kang, Albert, Valocchi (bib199) 2015
Noiriel, Steefel, Yang, Ajo-Franklin (bib119) 2012; 318–319
Tang, Zhan, Lu, Ma, Tan (bib171) 2019
Bryant, Thompson (bib20) 2001; 6
Jung, Meile (bib80) 2019; 224
Maher, Steefel, DePaolo, Viani (bib104) 2006; 70
Remy (bib139) 2005
Silin, Tomutsa, Benson, Patzek (bib150) 2011
Giesche (bib61) 2006; 23
Zheng, Spycher (bib207) 2018
Fatt (bib50) 1956; 207
Gärttner, Peter, Knabner, Ray (bib53) 2020; 56
Lehmann, Dani (bib91) 2013; 49
Dupin, Kitanidis, McCarty (bib44) 2001
Pot, Portell, Otten, Garnier, Monga, Philippe, Baveye (bib127) 2022; 73
Li, Deng, Molins (bib96) 2022; 3
Verardo, Atteia, Prommer (bib180) 2017; 201
Viswanathan, Dai, Lopano, Keating, Alexandra Hakala, Scheckel, Zheng, Guthrie, Pawar (bib182) 2012
Whitaker (bib187) 1986
Hassannayebi, Jammernegg, Schritter, Arnold, Enzmann, Kersten, Loibner, Ferno, Ott (bib72) 2021; 139
Deng, Navarre-Sitchler, Heil, Peters (bib39) 2021; 38
Hao, Cheng (bib71) 2010
Oelkers, Declercq, Saldi, Gislason, Jacques (bib120) 2018
Deng, Dai, Wolfsberg, Ye, Stauffer, Lu, Kwicklis (bib37) 2013; 91
He, Beyer, Fleckenstein, Jang, Kolditz, Naumov, Kalbacher (bib73) 2015; 8
Stolpovsky, Gharasoo, Thullner (bib167) 2012
Maes, Soulaine (bib103) 2018; 190
Rouquerol, Baron, Renaud, Giesche, Klobes, Levitz (bib142) 2012
Li, Steefel, Kowalsky (bib93) 2010; 112
Kolditz, Bauer, Bilke, Böttcher, Delfs, Fischer, Görke (bib87) 2012; 67
Kang, Chen, Valocchi, Viswanathan (bib82) 2014; 517
Bagudu, McDougall, Mackay (bib7) 2015; 110
Valvatne, Piri, Lopez (bib179) 2005; 58
Abu-Al-Saud, Moataz, Esmaeilzadeh, Riaz, Tchelepi (bib2) 2020; 569
Minto, Tan, Rebecca, Lunn, Guo, Cheng (bib108) 2018
Vogel, Weller, Schlüter (bib183) 2010
Xu, Sonnenthal, Spycher, Pruess (bib194) 2008
Spokas, Fang, Fitts, Peters, Elsworth (bib159) 2019
Gharasoo, Ehrl, Cirpka, Martin (bib59) 2019; 53
Deng, Tournassat, Molins, Claret, Steefel (bib40) 2021; 57
Molins, Trebotich, Arora, Steefel, Deng (bib110) 2019; 128
Wang, Zhang, Soong, Dilmore, Liu, Lei, Li (bib209) 2019; 125
Mudunuru, Karra (bib114) 2021; 374
Soulaine, Maes, Roman (bib157) 2021
Beckingham, Steefel, Alexander, Marco, Yang, Anovitz, Sheets (bib13) 2017; 205
Berg, Ott, Klapp, Schwing, Neiteler, Brussee, Makurat, Leu, Enzmann, Schwarz, Kersten, Irvine, Stampanoni (bib15) 2013; 110
Gharasoo, Babaei, Haeckel (bib58) 2019; 62
Beckingham, Peters, Um, Jones, Lindquist (bib12) 2013; 62
Xu, Apps, Pruess (bib210) 2004; 19
Guo, Mehmani, Tchelepi (bib66) 2019
Celia (bib26) 2017; 53
Zacharoudiou, Boek, Crawshaw (bib201) 2018; 8
Permann, Derek, David, Carlsen, Kong, Lindsay, Miller (bib125) 2020; 11
Surasani, Li Li, Ajo-Franklin, Hubbard, Wu (bib169) 2013
Herold, Janek, Ptak, Prommer (bib74) 2011; 119
Sing (bib151) 1989
Torres, Couture, Shafei, Nardi, Ayora, Van Cappellen (bib178) 2015; 419
Scheibe, Murphy, Chen, Amy, Kenneth, Bruce, Alexandre, Battiato, Wood (bib145) 2015; 53
Carrillo, Bourg (bib22) 2019; 55
Pagel, Ingwersen, Poll, Kandeler, Streck (bib122) 2014; 117
Czaja, Trukhan, Ulrich (bib30) 2009; 38
Soulaine, Creux, Tchelepi (bib156) 2019
Ormond, Peter (bib121) 2000; 105
Starchenko, Marra, Ladd (bib163) 2016
Soulaine, Tchelepi (bib153) 2016
Thullner, Van Cappellen, Regnier (bib177) 2005; 69
Weller, Tabor, Jasak, Fureby (bib185) 1998
Yang, Stack, Starchenko (bib196) 2021; 11
Pahlavan, Alizadeh Pahlavan, Cueto-Felgueroso, Hosoi, McKinley, Juanes (bib123) 2018
Jung, Meile (bib81) 2021; 139
Ulrich, Frind, Blowes (bib105) 2002; 38
Schäfer (bib144) 2001; 52
Ellis, Peters (bib47) 2016; 95
Gallup (bib52) 2009; 38
Acharya, Van der Zee, Leijnse (bib3) 2005; 41
Li, Maher, Navarre-Sitchler, Jenny, Meile, Lawrence (bib95) 2017
Soong, Crandall, Howard, Haljasmaa, Dalton, Zhang, Lin (bib152) 2018
Kruisdijk, van Breukelen (bib88) 2021
Hansen (bib70) 2004
Gharasoo, Elsner, Van Cappellen, Thullner (bib211) 2022
Nagel, Beckert, Lehmann, Gläser, Kolditz (bib115) 2016; 178
Noiriel (bib117) 2015; 80
Vermolen, Gholami Gharasoo, Zitha, Bruining (bib181) 2009
Thullner, Baveye (bib173) 2008; 99
Hou, Xu, Feng, Feng, Yuan, Jiang (bib75) 2019
Rajyaguru, L’Hôpital, Savoye, Wittebroodt, Bildstein, Arnoux, Detilleux, Fatnassi, Gouze, Lagneau (bib136) 2019
Noiriel, Soulaine (bib118) 2021; 140
Mostaghimi, Blunt, Bijeljic (bib113) 2013; 45
Beisman, Maxwell, Navarre-Sitchler (bib14) 2015; 19
Yang, Sun, Yang, Liu, Li (bib197) 2021
Mostaghimi, Bijeljic, Blunt (bib112) 2012; 17
Minto, Lunn, Gráinne El Mountassir (bib109) 2019; 55
Blunt, Bijeljic, Hu, Gharbi, Iglauer, Mostaghimi, Paluszny, Pentland (bib17) 2013; 51
Bultreys, De Boever, Cnudde (bib21) 2016; 155
Mellage, Eckert, Grösbacher, Inan, Cirpka, Griebler (bib107) 2015; 49
Tartakovsky, Tartakovsky, Scheibe, Fang, Mahadevan, Lovley (bib172) 2013
Carrillo, Bourg, Cyprien (bib24) 2020; 8
Zhang, Yee, Dilmore, Lopano (bib203) 2015
Thullner, Regnier (bib174) 2019
Brinkman (bib18) 1949; 1
Peters (bib126) 2009; 265
Steefel, Appelo, Arora, Jacques (bib166) 2015; 19
You, Lee (bib200) 2021
Schlüter, Sheppard, Brown, Wildenschild (bib146) 2014
Prasianakis, Haller, Mahrous, Poonoosamy, Pfingsten, Sergey, Churakov (bib128) 2020; 291
Rabbani, Jamshidi, Salehi (bib131) 2014; 123
Wang, Van Cappellen (bib184) 1996; 60
D'Elia, Deng, Fraces, Garikipati, Graham-Brady, Howard, George (bib45) 2022
Ehrl, Gharasoo, Martin (bib46) 2018; 52
Thullner, Schäfer (bib175) 1999; 3
Lopez-Peña, Luis, Meulenbroek, Vermolen (bib100) 2019
Deng, Poonoosamy, Molins (bib41) 2022; 137
Zhang, Deng, Dong, Molins (bib202) 2022
Davidson, Samanta, Caramori, Savage (bib34) 2012
Dou, Zhou (bib43) 2013; 42
Ezeuko, Sen, Grigoryan, Gates (bib49) 2011; 108
Bear (bib11) 1972
Soulaine, Gjetvaj, Garing, Roman, Anna, Gouze, Hamdi, Tchelepi (bib154) 2016
Werth, Zhang, Brusseau, Oostrom, Baumann (bib186) 2010; 113
Dong, Blunt (bib42) 2009; 80
Battiato, Tartakovsky, Tartakovsky, Scheibe (bib10) 2011; 34
Richards (bib140) 1931
Dai, Xu, Xiao, McPherson, Zhang, Zheng, Dong (bib32) 2020; 208
Thullner, Zeyer, Kinzelbach (bib176) 2002; 49
Sadeghnejad, Enzmann, Kersten (bib143) 2021
Soulaine, Pavuluri, Claret, Tournassat (bib158) 2021; 145
Jettestuen, Helland, Prodanović (bib78) 2013
Chen, Li, Valocchi, Christensen (bib28) 2018; 212
Joekar-Niasar, Hassanizadeh (bib79) 2012; 42
Fu, Qi, Li, Li, Han, Dang, Han (bib51) 2021; 9
Steefel, Tournassat (bib164) 2021; 25
Lichtner, Kang (bib97) 2007; 43
Prodanovic, Bryant, Karpyn (bib129) 2010; 15
Bakhshian, Sahimi (bib8) 2017; 57
Suchomel, Chen, Allen (bib168) 1998; 30
Deng, Spycher (bib36) 2019; 85
Sihota, Ulrich Mayer (bib149) 2012
Rosenzweig, Furman, Shavit (bib141) 2013
Leal, Kyas, Kulik, Saar (bib90) 2020; 133
Gostick, Aghighi, James, Tom, Hoeh, Day, Brennan (bib64) 2016; 18
Yan, Wang, Wang, Yang, Smith, Hilpert, Li, Shang, Bailey, Liu (bib195) 2018; 644
Qin, Beckingham (bib130) 2021; 124
Lari, Kaveh, Rayner, Bastow, Puzon (bib89) 2019; 157
Raoof, Nick, Hassanizadeh, Spiers (bib138) 2013
Brun, Engesgaard, Christensen, Rosbjerg (bib19) 2002
Cnudde, Boone (bib29) 2013; 123
Hajizadeh, Farhadpour (bib67) 2012; 94
Palandri, Kharaka (bib124) 2004; vol. 2004
Gharasoo, Centler, Fetzer, Thullner (bib56) 2014; 69
Gharedaghloo, Price, Rezanezhad, Quinton (bib60) 2018; 561
Golfier, Zarcone, Bazin, Lenormand, Lasseux, Quintard (bib62) 2002; 457
Hammond, Lichtner, Mills (bib69) 2014; 50
Centler, Shao, De Biase, Park, Regnier, Kolditz, Thullner (bib27) 2010; 36
Wildenschild, Sheppard (bib190) 2013
Zhang, Gedalanga, Mahendra (bib204) 2016; 50
Jacques, Šimůnek, Mallants, Th van Genuchten (bib76) 2018
Nogues, Fitts, Celia, Peters (bib116) 2013
Gharasoo, Thullner, Elsner (bib57) 2017; 98
Aradóttir, Sonnenthal, Björnsson, Jónsson (bib6) 2012; 9
Gharasoo, Centler, Regnier, Harms, Thullner (bib55) 2012; 30
McCartney, Sánchez, Tomac (bib106) 2016; 75
Jamshidi, Pishvaie (bib77) 2009; 32
Raeini, Bijeljic, Blunt (bib134) 2017; 96
Shams (bib148) 2018
Xie, Raeini, Wang, Blunt, Moran (bib192) 2017
Rabbani (10.1016/j.apgeochem.2022.105445_bib131) 2014; 123
Blunt (10.1016/j.apgeochem.2022.105445_bib17) 2013; 51
Raeini (10.1016/j.apgeochem.2022.105445_bib134) 2017; 96
Nagel (10.1016/j.apgeochem.2022.105445_bib115) 2016; 178
Whitaker (10.1016/j.apgeochem.2022.105445_bib187) 1986
Stolpovsky (10.1016/j.apgeochem.2022.105445_bib167) 2012
Gärttner (10.1016/j.apgeochem.2022.105445_bib53) 2020; 56
Yang (10.1016/j.apgeochem.2022.105445_bib197) 2021
Gharasoo (10.1016/j.apgeochem.2022.105445_bib57) 2017; 98
Li (10.1016/j.apgeochem.2022.105445_bib93) 2010; 112
Zhang (10.1016/j.apgeochem.2022.105445_bib203) 2015
Deng (10.1016/j.apgeochem.2022.105445_bib38) 2018; 239
Soulaine (10.1016/j.apgeochem.2022.105445_bib158) 2021; 145
Centler (10.1016/j.apgeochem.2022.105445_bib27) 2010; 36
Ehrl (10.1016/j.apgeochem.2022.105445_bib46) 2018; 52
Rabbani (10.1016/j.apgeochem.2022.105445_bib132) 2016
Leal (10.1016/j.apgeochem.2022.105445_bib90) 2020; 133
Jung (10.1016/j.apgeochem.2022.105445_bib81) 2021; 139
Yoon (10.1016/j.apgeochem.2022.105445_bib198) 2012
Soulaine (10.1016/j.apgeochem.2022.105445_bib154) 2016
Kruisdijk (10.1016/j.apgeochem.2022.105445_bib88) 2021
Gharasoo (10.1016/j.apgeochem.2022.105445_bib59) 2019; 53
Minto (10.1016/j.apgeochem.2022.105445_bib109) 2019; 55
He (10.1016/j.apgeochem.2022.105445_bib73) 2015; 8
Fatt (10.1016/j.apgeochem.2022.105445_bib50) 1956; 207
Acharya (10.1016/j.apgeochem.2022.105445_bib3) 2005; 41
Dahle (10.1016/j.apgeochem.2022.105445_bib31) 1999; 3
Xu (10.1016/j.apgeochem.2022.105445_bib194) 2008
Li (10.1016/j.apgeochem.2022.105445_bib94) 2006; 29
Dávila (10.1016/j.apgeochem.2022.105445_bib35) 2016; 48
Carrillo (10.1016/j.apgeochem.2022.105445_bib24) 2020; 8
Carrillo (10.1016/j.apgeochem.2022.105445_bib25) 2022; 161
Ezeuko (10.1016/j.apgeochem.2022.105445_bib49) 2011; 108
Czaja (10.1016/j.apgeochem.2022.105445_bib30) 2009; 38
Dupin (10.1016/j.apgeochem.2022.105445_bib44) 2001
Hansen (10.1016/j.apgeochem.2022.105445_bib70) 2004
Szymczak (10.1016/j.apgeochem.2022.105445_bib170) 2009
Thullner (10.1016/j.apgeochem.2022.105445_bib177) 2005; 69
Celia (10.1016/j.apgeochem.2022.105445_bib26) 2017; 53
Silin (10.1016/j.apgeochem.2022.105445_bib150) 2011
Liu (10.1016/j.apgeochem.2022.105445_bib98) 2015; 27
Xiao (10.1016/j.apgeochem.2022.105445_bib191) 2017
Noiriel (10.1016/j.apgeochem.2022.105445_bib118) 2021; 140
Steefel (10.1016/j.apgeochem.2022.105445_bib166) 2015; 19
Steefel (10.1016/j.apgeochem.2022.105445_bib164) 2021; 25
Surasani (10.1016/j.apgeochem.2022.105445_bib169) 2013
Wang (10.1016/j.apgeochem.2022.105445_bib184) 1996; 60
Soong (10.1016/j.apgeochem.2022.105445_bib152) 2018
Zhang (10.1016/j.apgeochem.2022.105445_bib204) 2016; 50
Li (10.1016/j.apgeochem.2022.105445_bib96) 2022; 3
Dashtian (10.1016/j.apgeochem.2022.105445_bib33) 2019; 125
Lari (10.1016/j.apgeochem.2022.105445_bib89) 2019; 157
Sihota (10.1016/j.apgeochem.2022.105445_bib149) 2012
Kolditz (10.1016/j.apgeochem.2022.105445_bib87) 2012; 67
Qin (10.1016/j.apgeochem.2022.105445_bib130) 2021; 124
Thullner (10.1016/j.apgeochem.2022.105445_bib173) 2008; 99
Tang (10.1016/j.apgeochem.2022.105445_bib171) 2019
Vogel (10.1016/j.apgeochem.2022.105445_bib183) 2010
Brinkman (10.1016/j.apgeochem.2022.105445_bib18) 1949; 1
Gharasoo (10.1016/j.apgeochem.2022.105445_bib56) 2014; 69
Ormond (10.1016/j.apgeochem.2022.105445_bib121) 2000; 105
Starchenko (10.1016/j.apgeochem.2022.105445_bib162) 2022; 3
Beckingham (10.1016/j.apgeochem.2022.105445_bib12) 2013; 62
Lichtner (10.1016/j.apgeochem.2022.105445_bib97) 2007; 43
Bakhshian (10.1016/j.apgeochem.2022.105445_bib8) 2017; 57
Vermolen (10.1016/j.apgeochem.2022.105445_bib181) 2009
Verardo (10.1016/j.apgeochem.2022.105445_bib180) 2017; 201
Aradóttir (10.1016/j.apgeochem.2022.105445_bib6) 2012; 9
Pagel (10.1016/j.apgeochem.2022.105445_bib122) 2014; 117
Kim (10.1016/j.apgeochem.2022.105445_bib86) 2022; 136
Spokas (10.1016/j.apgeochem.2022.105445_bib159) 2019
Nogues (10.1016/j.apgeochem.2022.105445_bib116) 2013
Maher (10.1016/j.apgeochem.2022.105445_bib104) 2006; 70
Beckingham (10.1016/j.apgeochem.2022.105445_bib13) 2017; 205
Ellis (10.1016/j.apgeochem.2022.105445_bib48) 2010; 4
You (10.1016/j.apgeochem.2022.105445_bib200) 2021
Rajyaguru (10.1016/j.apgeochem.2022.105445_bib136) 2019
Bagudu (10.1016/j.apgeochem.2022.105445_bib7) 2015; 110
Rouquerol (10.1016/j.apgeochem.2022.105445_bib142) 2012
Jamshidi (10.1016/j.apgeochem.2022.105445_bib77) 2009; 32
Torres (10.1016/j.apgeochem.2022.105445_bib178) 2015; 419
Khaled (10.1016/j.apgeochem.2022.105445_bib83) 2003; 46
Maes (10.1016/j.apgeochem.2022.105445_bib103) 2018; 190
Weller (10.1016/j.apgeochem.2022.105445_bib185) 1998
Al-Kharusi (10.1016/j.apgeochem.2022.105445_bib4) 2008; 44
Barry (10.1016/j.apgeochem.2022.105445_bib9) 2002; 25
Dou (10.1016/j.apgeochem.2022.105445_bib43) 2013; 42
Zheng (10.1016/j.apgeochem.2022.105445_bib207) 2018
Molins (10.1016/j.apgeochem.2022.105445_bib110) 2019; 128
Ulrich (10.1016/j.apgeochem.2022.105445_bib105) 2002; 38
White (10.1016/j.apgeochem.2022.105445_bib189) 2020; 54
Alt-Epping (10.1016/j.apgeochem.2022.105445_bib5) 2013; 45
White (10.1016/j.apgeochem.2022.105445_bib188) 1995
Berkowitz (10.1016/j.apgeochem.2022.105445_bib16) 2016; 54
Li (10.1016/j.apgeochem.2022.105445_bib92) 2019; 85
Rosenzweig (10.1016/j.apgeochem.2022.105445_bib141) 2013
Werth (10.1016/j.apgeochem.2022.105445_bib186) 2010; 113
Wildenschild (10.1016/j.apgeochem.2022.105445_bib190) 2013
Remy (10.1016/j.apgeochem.2022.105445_bib139) 2005
Sing (10.1016/j.apgeochem.2022.105445_bib151) 1989
Raoof (10.1016/j.apgeochem.2022.105445_bib138) 2013
Beisman (10.1016/j.apgeochem.2022.105445_bib14) 2015; 19
Richards (10.1016/j.apgeochem.2022.105445_bib140) 1931
Scheibe (10.1016/j.apgeochem.2022.105445_bib145) 2015; 53
Khurana (10.1016/j.apgeochem.2022.105445_bib84) 2022
Lopez-Peña (10.1016/j.apgeochem.2022.105445_bib99) 2018; 22
Jettestuen (10.1016/j.apgeochem.2022.105445_bib78) 2013
Seetha (10.1016/j.apgeochem.2022.105445_bib147) 2017; 200
Hajizadeh (10.1016/j.apgeochem.2022.105445_bib67) 2012; 94
Soulaine (10.1016/j.apgeochem.2022.105445_bib157) 2021
Maes (10.1016/j.apgeochem.2022.105445_bib102) 2021; 139
Gharasoo (10.1016/j.apgeochem.2022.105445_bib211) 2022
Genuchten (10.1016/j.apgeochem.2022.105445_bib54) 1980
Golfier (10.1016/j.apgeochem.2022.105445_bib62) 2002; 457
Brun (10.1016/j.apgeochem.2022.105445_bib19) 2002
Schlüter (10.1016/j.apgeochem.2022.105445_bib146) 2014
Abadie (10.1016/j.apgeochem.2022.105445_bib1) 2015; 297
Fu (10.1016/j.apgeochem.2022.105445_bib51) 2021; 9
Molins (10.1016/j.apgeochem.2022.105445_bib111) 2021; 25
Mostaghimi (10.1016/j.apgeochem.2022.105445_bib113) 2013; 45
Prodanovic (10.1016/j.apgeochem.2022.105445_bib129) 2010; 15
Yan (10.1016/j.apgeochem.2022.105445_bib195) 2018; 644
Ellis (10.1016/j.apgeochem.2022.105445_bib47) 2016; 95
Abu-Al-Saud (10.1016/j.apgeochem.2022.105445_bib2) 2020; 569
Deng (10.1016/j.apgeochem.2022.105445_bib40) 2021; 57
Hajizadeh (10.1016/j.apgeochem.2022.105445_bib68) 2011
Permann (10.1016/j.apgeochem.2022.105445_bib125) 2020; 11
Bryant (10.1016/j.apgeochem.2022.105445_bib20) 2001; 6
Chen (10.1016/j.apgeochem.2022.105445_bib28) 2018; 212
D'Elia (10.1016/j.apgeochem.2022.105445_bib45) 2022
Guo (10.1016/j.apgeochem.2022.105445_bib65) 2018
Joekar-Niasar (10.1016/j.apgeochem.2022.105445_bib79) 2012; 42
Deng (10.1016/j.apgeochem.2022.105445_bib36) 2019; 85
Hassannayebi (10.1016/j.apgeochem.2022.105445_bib72) 2021; 139
Gostick (10.1016/j.apgeochem.2022.105445_bib64) 2016; 18
Schäfer (10.1016/j.apgeochem.2022.105445_bib144) 2001; 52
Shams (10.1016/j.apgeochem.2022.105445_bib148) 2018
Deng (10.1016/j.apgeochem.2022.105445_bib41) 2022; 137
Mostaghimi (10.1016/j.apgeochem.2022.105445_bib112) 2012; 17
Hao (10.1016/j.apgeochem.2022.105445_bib71) 2010
Guo (10.1016/j.apgeochem.2022.105445_bib66) 2019
Lehmann (10.1016/j.apgeochem.2022.105445_bib91) 2013; 49
Bear (10.1016/j.apgeochem.2022.105445_bib11) 1972
Battiato (10.1016/j.apgeochem.2022.105445_bib10) 2011; 34
Khurana (10.1016/j.apgeochem.2022.105445_bib85) 2022
Starchenko (10.1016/j.apgeochem.2022.105445_bib163) 2016
Xie (10.1016/j.apgeochem.2022.105445_bib192) 2017
Tartakovsky (10.1016/j.apgeochem.2022.105445_bib172) 2013
Raeini (10.1016/j.apgeochem.2022.105445_bib133) 2013
Gharedaghloo (10.1016/j.apgeochem.2022.105445_bib60) 2018; 561
Carrillo (10.1016/j.apgeochem.2022.105445_bib22) 2019; 55
Xiong (10.1016/j.apgeochem.2022.105445_bib193) 2021
Noiriel (10.1016/j.apgeochem.2022.105445_bib117) 2015; 80
Valvatne (10.1016/j.apgeochem.2022.105445_bib179) 2005; 58
Spycher (10.1016/j.apgeochem.2022.105445_bib161) 2019
Suchomel (10.1016/j.apgeochem.2022.105445_bib168) 1998; 30
Minto (10.1016/j.apgeochem.2022.105445_bib108) 2018
Sadeghnejad (10.1016/j.apgeochem.2022.105445_bib143) 2021
Giesche (10.1016/j.apgeochem.2022.105445_bib61) 2006; 23
McCartney (10.1016/j.apgeochem.2022.105445_bib106) 2016; 75
Xu (10.1016/j.apgeochem.2022.105445_bib210) 2004; 19
Yoon (10.1016/j.apgeochem.2022.105445_bib199) 2015
Pahlavan (10.1016/j.apgeochem.2022.105445_bib123) 2018
Raoof (10.1016/j.apgeochem.2022.105445_bib137) 2010
Berg (10.1016/j.apgeochem.2022.105445_bib15) 2013; 110
Hammond (10.1016/j.apgeochem.2022.105445_bib69) 2014; 50
Soulaine (10.1016/j.apgeochem.2022.105445_bib153) 2016
Herold (10.1016/j.apgeochem.2022.105445_bib74) 2011; 119
Jacques (10.1016/j.apgeochem.2022.105445_bib76) 2018
Mellage (10.1016/j.apgeochem.2022.105445_bib107) 2015; 49
Zhu (10.1016/j.apgeochem.2022.105445_bib208) 2021
Gharasoo (10.1016/j.apgeochem.2022.105445_bib58) 2019; 62
Mudunuru (10.1016/j.apgeochem.2022.105445_bib114) 2021; 374
Wang (10.1016/j.apgeochem.2022.105445_bib209) 2019; 125
Gallup (10.1016/j.apgeochem.2022.105445_bib52) 2009; 38
Deng (10.1016/j.apgeochem.2022.105445_bib39) 2021; 38
Thullner (10.1016/j.apgeochem.2022.105445_bib174) 2019
Thullner (10.1016/j.apgeochem.2022.105445_bib175) 1999; 3
Jung (10.1016/j.apgeochem.2022.105445_bib80) 2019; 224
Pot (10.1016/j.apgeochem.2022.105445_bib127) 2022; 73
Thullner (10.1016/j.apgeochem.2022.105445_bib176) 2002; 49
Zacharoudiou (10.1016/j.apgeochem.2022.105445_bib201) 2018; 8
Cnudde (10.1016/j.apgeochem.2022.105445_bib29) 2013; 123
Golpa
References_xml – volume: 190
  start-page: 405
  year: 2018
  end-page: 418
  ident: bib103
  article-title: A new compressive scheme to simulate species transfer across fluid interfaces using the volume-of-fluid method
  publication-title: Chemical Engineering Science
– year: 2008
  ident: bib194
  article-title: TOUGHREACT User's Guide: A Simulation Program for Non-isothermal Multiphase Reactive Geochemical Transport in Variably Saturated Geologic Media, V1.2.1
– volume: 112
  start-page: 45
  year: 2010
  end-page: 63
  ident: bib93
  article-title: Andreas englert, and susan S. Hubbard. 2010. “Effects of physical and geochemical heterogeneities on mineral transformation and biomass accumulation during biostimulation experiments at rifle, Colorado
  publication-title: Journal of Contaminant Hydrology
– year: 2001
  ident: bib44
  article-title: Simulations of two-dimensional modeling of biomass aggregate growth in network models
  publication-title: Water Resources Research
– volume: 3
  year: 2022
  ident: bib96
  article-title: The effect of pore-scale two-phase flow on mineral reaction rates
  publication-title: Frontiers in Water
– volume: 62
  start-page: 1
  year: 2013
  end-page: 12
  ident: bib12
  article-title: 2D and 3D imaging resolution trade-offs in quantifying pore throats for prediction of permeability
  publication-title: Advances in Water Resources
– volume: 569
  start-page: 366
  year: 2020
  end-page: 377
  ident: bib2
  article-title: Pore-scale study of water salinity effect on thin-film stability for a moving oil droplet
  publication-title: Journal of Colloid and Interface Science
– volume: 15
  start-page: 125
  year: 2010
  end-page: 136
  ident: bib129
  article-title: Investigating matrix/fracture transfer via a level set method for drainage and imbibition
  publication-title: SPE Journal
– year: 2013
  ident: bib190
  article-title: X-ray imaging and analysis techniques for quantifying pore-scale structure and processes in subsurface porous medium systems
  publication-title: Advances in Water Resources
– year: 1972
  ident: bib11
  article-title: Dynamics of Fluids in Porous Media/Jacob Bear
– year: 2022
  ident: bib84
  article-title: Predicting the impact of spatial heterogeneity on microbially mediated nutrient cycling in the subsurface
  publication-title: Biogeosciences
– volume: 70
  start-page: 337
  year: 2006
  end-page: 363
  ident: bib104
  article-title: The mineral dissolution rate conundrum: insights from reactive transport modeling of U isotopes and pore fluid chemistry in marine sediments
  publication-title: Geochimica et Cosmochimica Acta
– volume: 139
  start-page: 271
  year: 2021
  end-page: 299
  ident: bib102
  article-title: GeoChemFoam: direct modelling of multiphase reactive transport in real pore geometries with equilibrium reactions
  publication-title: Transport in Porous Media
– year: 1986
  ident: bib187
  article-title: Flow in porous media I: a theoretical derivation of Darcy's law
  publication-title: Transport in Porous Media
– year: 2004
  ident: bib70
  article-title: Mgstat: a geostatistical matlab toolbox
  publication-title: Online Web Resource
– volume: 62
  start-page: 330
  year: 2019
  end-page: 339
  ident: bib58
  article-title: Simulating the chemical kinetics of CO2-methane exchange in hydrate
  publication-title: Journal of Natural Gas Science and Engineering
– volume: 11
  year: 2020
  ident: bib125
  article-title: MOOSE: enabling massively parallel multiphysics simulation
  publication-title: SoftwareX
– volume: 11
  start-page: 3495
  year: 2021
  ident: bib196
  article-title: Micro-continuum approach for mineral precipitation
  publication-title: Scientific Reports
– year: 2021
  ident: bib193
  article-title: Constraining fluid-rock interactions during eogenetic karst and their impacts on carbonate reservoirs: insights from reactive transport modeling
  publication-title: Applied Geochemistry
– volume: 265
  start-page: 198
  year: 2009
  end-page: 208
  ident: bib126
  article-title: Accessibilities of reactive minerals in consolidated sedimentary rock: an imaging study of three sandstones
  publication-title: Chemical Geology
– volume: 30
  start-page: 102
  year: 2012
  end-page: 114
  ident: bib55
  article-title: A reactive transport modeling approach to simulate biogeochemical processes in pore structures with pore-scale heterogeneities
  publication-title: Environmental Modelling & Software
– volume: 73
  year: 2022
  ident: bib127
  article-title: Accounting for soil architecture and microbial dynamics in microscale models: current practices in soil science and the path ahead
  publication-title: European Journal of Soil Science
– year: 2019
  ident: bib156
  article-title: Micro-continuum framework for pore-scale multiphase fluid transport in shale formations
  publication-title: Transport in Porous Media
– volume: 123
  start-page: 1
  year: 2013
  end-page: 17
  ident: bib29
  article-title: High-resolution X-ray computed tomography in geosciences: a review of the current technology and applications
  publication-title: Earth-Science Reviews
– year: 1989
  ident: bib151
  article-title: The use of gas adsorption for the characterization of porous solids
  publication-title: Colloids and Surfaces
– volume: 19
  start-page: 917
  year: 2004
  end-page: 936
  ident: bib210
  article-title: Numerical simulation of CO2 disposal by mineral trapping in deep aquifers
  publication-title: Applied Geochemistry
– year: 2019
  ident: bib136
  article-title: Experimental characterization of coupled diffusion reaction mechanisms in low permeability chalk
  publication-title: Chemical Geology
– volume: vol. 2004
  year: 2004
  ident: bib124
  publication-title: A Compilation of Rate Parameters of Water-Mineral Interaction Kinetics for Application to Geochemical Modeling
– year: 2012
  ident: bib34
  article-title: The dual arrhenius and michaelis-menten kinetics model for decomposition of soil organic matter at hourly to seasonal time scales
  publication-title: Global Change Biology
– year: 2013
  ident: bib138
  article-title: PoreFlow: a complex pore-network model for simulation of reactive transport in variably saturated porous media
  publication-title: Computers & Geosciences
– volume: 205
  start-page: 31
  year: 2017
  end-page: 49
  ident: bib13
  article-title: Evaluation of accessible mineral surface areas for improved prediction of mineral reaction rates in porous media
  publication-title: Geochimica et Cosmochimica Acta
– volume: 42
  start-page: 1895
  year: 2012
  end-page: 1976
  ident: bib79
  article-title: Analysis of fundamentals of two-phase flow in porous media using dynamic pore-network models: a review
  publication-title: Critical Reviews in Environmental Science and Technology
– volume: 85
  start-page: 49
  year: 2019
  end-page: 74
  ident: bib36
  article-title: Modeling reactive transport processes in fractures
  publication-title: Reviews in Mineralogy and Geochemistry
– start-page: 265
  year: 2019
  end-page: 302
  ident: bib174
  article-title: 9. Microbial controls on the biogeochemical dynamics in the subsurface
  publication-title: Reactive Transport in Natural and Engineered Systems
– volume: 57
  year: 2021
  ident: bib160
  article-title: Integrating process‐based reactive transport modeling and machine learning for electrokinetic remediation of contaminated groundwater
  publication-title: Water Resources Research
– year: 2018
  ident: bib152
  article-title: Permeability and mineral composition evolution of primary seal and reservoir rocks in geologic carbon storage conditions
  publication-title: Environmental Engineering Science
– year: 2010
  ident: bib183
  article-title: Quantification of soil structure based on minkowski functions
  publication-title: Computers & Geosciences
– volume: 32
  start-page: 1543
  year: 2009
  end-page: 1553
  ident: bib77
  article-title: Application of GA in optimization of pore network models generated by multi-cellular growth algorithms
  publication-title: Advances in Water Resources
– volume: 29
  start-page: 1351
  year: 2006
  end-page: 1370
  ident: bib94
  article-title: Upscaling geochemical reaction rates using pore-scale network modeling
  publication-title: Advances in Water Resources
– volume: 53
  start-page: 3527
  year: 2017
  end-page: 3533
  ident: bib26
  article-title: Geological Storage of Captured Carbon Dioxide as a Large‐scale Carbon Mitigation Option
– volume: 113
  start-page: 1
  year: 2010
  end-page: 24
  ident: bib186
  article-title: A review of non-invasive imaging methods and applications in contaminant hydrogeology research
  publication-title: Journal of Contaminant Hydrology
– volume: 25
  start-page: 945
  year: 2002
  end-page: 983
  ident: bib9
  article-title: Modelling the fate of oxidisable organic contaminants in groundwater
  publication-title: Advances in Water Resources
– volume: 224
  year: 2019
  ident: bib80
  article-title: Upscaling of microbially driven first-order reactions in heterogeneous porous media
  publication-title: Journal of Contaminant Hydrology
– year: 2009
  ident: bib170
  article-title: Wormhole formation in dissolving fractures
  publication-title: Journal of Geophysical Research
– volume: 69
  start-page: 5005
  year: 2005
  end-page: 5019
  ident: bib177
  article-title: Modeling the impact of microbial activity on redox dynamics in porous media
  publication-title: Geochimica et Cosmochimica Acta
– year: 2011
  ident: bib68
  article-title: A multiple-point statistics algorithm for 3D pore space reconstruction from 2D images
  publication-title: Advances in Water Resources
– volume: 56
  year: 2020
  ident: bib53
  article-title: Efficiency and accuracy of micro‐macro models for mineral dissolution
  publication-title: Water Resources Research
– volume: 43
  year: 2007
  ident: bib97
  article-title: Upscaling pore-scale reactive transport equations using a multiscale continuum formulation
  publication-title: Water Resources Research
– volume: 30
  start-page: 1
  year: 1998
  end-page: 23
  ident: bib168
  article-title: Network model of flow, transport and biofilm effects in porous media
  publication-title: Transport in Porous Media
– year: 2012
  ident: bib182
  article-title: Developing a robust geochemical and reactive transport model to evaluate possible sources of arsenic at the CO2 sequestration natural analog site in chimayo, New Mexico
  publication-title: International Journal of Greenhouse Gas Control
– volume: 22
  start-page: 1543
  year: 2018
  end-page: 1559
  ident: bib99
  article-title: Conditions for upscalability of bioclogging in pore network models
  publication-title: Computational Geosciences
– year: 1998
  ident: bib185
  article-title: A tensorial approach to computational continuum mechanics using object-oriented techniques
  publication-title: Computers in Physics
– year: 2018
  ident: bib108
  article-title: ‘Microbial mortar’-restoration of degraded marble structures with microbially induced carbonate precipitation
  publication-title: Construction and Building Materials
– volume: 38
  start-page: 109
  year: 2021
  end-page: 114
  ident: bib39
  article-title: Addressing water and energy challenges with reactive transport modeling
  publication-title: Environmental Engineering Science
– volume: 419
  start-page: 75
  year: 2015
  end-page: 91
  ident: bib178
  article-title: Reactive transport modeling of early diagenesis in a reservoir lake affected by acid mine drainage: trace metals, lake overturn, benthic fluxes and remediation
  publication-title: Chemical Geology
– volume: 41
  year: 2005
  ident: bib3
  article-title: Transport modeling of nonlinearly adsorbing solutes in physically heterogeneous pore networks
  publication-title: Water Resources Research
– year: 2017
  ident: bib155
  article-title: Mineral dissolution and wormholing from a pore-scale perspective
  publication-title: Journal of Fluid Mechanics
– volume: 318–319
  start-page: 60
  year: 2012
  end-page: 74
  ident: bib119
  article-title: Upscaling calcium carbonate precipitation rates from pore to continuum scale
  publication-title: Chemical Geology
– volume: 38
  start-page: 13
  year: 2002
  ident: bib105
  article-title: Multicomponent reactive transport modeling in variably saturated porous media using a generalized formulation for kinetically controlled reactions
  publication-title: Water Resources Research
– volume: 48
  start-page: 105
  year: 2016
  end-page: 119
  ident: bib35
  article-title: Interaction between a fractured marl caprock and CO2-rich sulfate solution under supercritical CO2 conditions
  publication-title: International Journal of Greenhouse Gas Control
– volume: 9
  start-page: 24
  year: 2012
  end-page: 40
  ident: bib6
  article-title: Multidimensional reactive transport modeling of CO2 mineral sequestration in basalts at the hellisheidi geothermal field, Iceland
  publication-title: International Journal of Greenhouse Gas Control
– volume: 125
  start-page: 55
  year: 2019
  end-page: 68
  ident: bib209
  article-title: From core-scale experiment to reservoir-scale modeling: A scale-up approach to investigate reaction-induced permeability evolution of CO2 storage reservoir and caprock at a US CO2 storage site
  publication-title: Computers & Geosciences
– year: 2013
  ident: bib169
  article-title: Bioclogging and permeability alteration by
  publication-title: Energy & Fuels
– volume: 8
  start-page: 3333
  year: 2015
  end-page: 3348
  ident: bib73
  article-title: A parallelization scheme to simulate reactive transport in the subsurface environment with OGS#IPhreeqc 5.5.7-3.1.2
  publication-title: Geoscientific Model Development
– volume: 57
  start-page: 1
  year: 2017
  end-page: 13
  ident: bib8
  article-title: Adsorption-induced swelling of porous media
  publication-title: International Journal of Greenhouse Gas Control
– volume: 46
  start-page: 4989
  year: 2003
  end-page: 5003
  ident: bib83
  article-title: The role of porous media in modeling flow and heat transfer in biological tissues
  publication-title: International Journal of Heat and Mass Transfer
– volume: 17
  start-page: 1131
  year: 2012
  end-page: 1141
  ident: bib112
  article-title: Simulation of flow and dispersion on pore-space images
  publication-title: SPE Journal
– year: 2022
  ident: bib45
  article-title: Machine Learning in Heterogeneous Porous Materials
– volume: 157
  start-page: 630
  year: 2019
  end-page: 646
  ident: bib89
  article-title: Natural source zone depletion of LNAPL: a critical review supporting modelling approaches
  publication-title: Water Research
– year: 1995
  ident: bib188
  article-title: Chapter 1. Chemical weathering rates of silicate minerals: an overview
  publication-title: Chemical Weathering Rates of Silicate Minerals
– volume: 178
  start-page: 323
  year: 2016
  end-page: 345
  ident: bib115
  article-title: Multi-physical continuum models of thermochemical heat storage and transformation in porous media and powder beds—a review
  publication-title: Applied Energy
– volume: 125
  start-page: 19
  year: 2019
  end-page: 29
  ident: bib33
  article-title: Convection-diffusion-reaction of CO2-enriched brine in porous media: a pore-scale study
  publication-title: Computers & Geosciences
– year: 2017
  ident: bib192
  article-title: An improved pore-network model including viscous coupling effects using direct simulation by the Lattice Boltzmann method
  publication-title: Advances in Water Resources
– volume: 50
  start-page: 9599
  year: 2016
  end-page: 9607
  ident: bib204
  article-title: Biodegradation kinetics of 1,4-dioxane in chlorinated solvent mixtures
  publication-title: Environmental Science & Technology
– volume: 51
  start-page: 197
  year: 2013
  end-page: 216
  ident: bib17
  article-title: Pore-scale imaging and modelling
  publication-title: Advances in Water Resources
– year: 2017
  ident: bib191
  article-title: Quantification of CO2-cement-rock interactions at the well-caprock-reservoir interface and implications for geological CO2 storage
  publication-title: International Journal of Greenhouse Gas Control
– volume: 116
  start-page: 13799
  year: 2019
  end-page: 13806
  ident: bib206
  article-title: Comprehensive comparison of pore-scale models for multiphase flow in porous media
  publication-title: Proceedings of the National Academy of Sciences of the United States of America
– year: 2018
  ident: bib76
  article-title: The HPx software for multicomponent reactive transport during variably-saturated flow: recent developments and applications
  publication-title: Journal of Hydrology and Hydromechanics
– volume: 25
  start-page: 1285
  year: 2021
  end-page: 1318
  ident: bib111
  article-title: Simulation of mineral dissolution at the pore scale with evolving fluid-solid interfaces: review of approaches and benchmark problem set
  publication-title: Computational Geosciences
– volume: 111
  start-page: 6
  year: 2018
  end-page: 19
  ident: bib101
  article-title: Direct pore-scale reactive transport modelling of dynamic wettability changes induced by surface complexation
  publication-title: Advances in Water Resources
– year: 2018
  ident: bib65
  article-title: Image-based micro-continuum model for gas flow in organic-rich shale rock
  publication-title: Advances in Water Resources
– year: 2021
  ident: bib88
  article-title: Reactive transport modelling of push-pull tests: a versatile approach to quantify aquifer reactivity
  publication-title: Applied Geochemistry
– year: 2019
  ident: bib159
  article-title: Collapse of reacted fracture surface decreases permeability and frictional strength
  publication-title: Journal of Geophysical Research: Solid Earth
– volume: 291
  start-page: 126
  year: 2020
  end-page: 143
  ident: bib128
  article-title: Neural network based process coupling and parameter upscaling in reactive transport simulations
  publication-title: Geochimica et Cosmochimica Acta
– volume: 38
  start-page: 1284
  year: 2009
  end-page: 1293
  ident: bib30
  article-title: Industrial applications of metal–organic frameworks
  publication-title: Chemical Society Reviews
– year: 2022
  ident: bib202
  article-title: Investigation of coupled processes in fractures and the bordering matrix via a micro‐continuum reactive transport model
  publication-title: Water Resources Research
– year: 2010
  ident: bib71
  article-title: Lattice Boltzmann simulations of water transport in gas diffusion layer of a polymer electrolyte membrane fuel cell
  publication-title: Journal of Power Sources
– year: 2013
  ident: bib78
  article-title: A Level Set Method for Simulating Capillary-Controlled Displacements at the Pore Scale with Nonzero Contact Angles
– volume: 80
  start-page: 247
  year: 2015
  end-page: 285
  ident: bib117
  article-title: Resolving time-dependent evolution of pore-scale structure, permeability and reactivity using X-ray microtomography
  publication-title: Reviews in Mineralogy and Geochemistry
– year: 2005
  ident: bib139
  article-title: S-GeMS: the stanford geostatistical modeling software: a tool for new algorithms development
  publication-title: Geostatistics Banff 2004
– volume: 9
  start-page: 80
  year: 2021
  end-page: 100
  ident: bib51
  article-title: Accurate characterization of full pore size distribution of tight sandstones by low‐temperature nitrogen gas adsorption and high‐pressure mercury intrusion combination method
  publication-title: Energy Science & Engineering
– year: 2021
  ident: bib197
  article-title: Recent progress in multi‐scale modeling and simulation of flow and solute transport in porous media
  publication-title: WIREs Water
– year: 2021
  ident: bib200
  article-title: Pore-scale study to analyze the impacts of porous media heterogeneity on mineral dissolution and acid transport using Darcy–brinkmann–Stokes method
  publication-title: Transport in Porous Media
– volume: 303
  year: 2021
  ident: bib205
  article-title: Application of upscaling methods for fluid flow and mass transport in multi-scale heterogeneous media: a critical review
  publication-title: Applied Energy
– year: 2013
  ident: bib133
  article-title: Modelling Multiphase Flow through Micro-CT Images of the Pore Space
– volume: 67
  start-page: 589
  year: 2012
  end-page: 599
  ident: bib87
  article-title: OpenGeoSys: an open-source initiative for numerical simulation of thermo-hydro-mechanical/chemical (THM/C) processes in porous media
  publication-title: Environmental Earth Sciences
– volume: 97
  year: 2018
  ident: bib135
  article-title: Generalized network modeling of capillary-dominated two-phase flow
  publication-title: Physical Review
– volume: 80
  year: 2009
  ident: bib42
  article-title: Pore-network extraction from micro-computerized-tomography images
  publication-title: Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics
– year: 2021
  ident: bib157
  article-title: Computational microfluidics for geosciences
  publication-title: 3 (March)
– volume: 124
  year: 2021
  ident: bib130
  article-title: The impact of mineral reactive surface area variation on simulated mineral reactions and reaction rates
  publication-title: Applied Geochemistry: Journal of the International Association of Geochemistry and Cosmochemistry
– volume: 201
  start-page: 6
  year: 2017
  end-page: 18
  ident: bib180
  article-title: Elucidating the fate of a mixed toluene, DHM, methanol, and I-propanol plume during in situ bioremediation
  publication-title: Journal of Contaminant Hydrology
– year: 2012
  ident: bib198
  article-title: Pore-scale simulation of mixing-induced calcium carbonate precipitation and dissolution in a microfluidic pore network
  publication-title: Water Resources Research
– volume: 99
  start-page: 1337
  year: 2008
  end-page: 1351
  ident: bib173
  article-title: Computational pore network modeling of the influence of biofilm permeability on bioclogging in porous media
  publication-title: Biotechnology and Bioengineering
– year: 2022
  ident: bib85
  article-title: Should we worry about surficial dynamics when assessing nutrient cycling in the groundwater?
  publication-title: Frontiers in Water
– volume: 60
  start-page: 2993
  year: 1996
  end-page: 3014
  ident: bib184
  article-title: A multicomponent reactive transport model of early diagenesis: application to redox cycling in coastal marine sediments
  publication-title: Geochimica et Cosmochimica Acta
– volume: 161
  year: 2022
  ident: bib25
  article-title: The impact of sub-resolution porosity on numerical simulations of multiphase flow
  publication-title: Advances in Water Resources
– volume: 3
  start-page: 247
  year: 1999
  end-page: 267
  ident: bib175
  article-title: Modeling of a field experiment on bioremediation of chlorobenzenes in groundwater
  publication-title: Bioremediation Journal
– volume: 95
  start-page: 246
  year: 2016
  end-page: 253
  ident: bib47
  article-title: 3D mapping of calcite and a demonstration of its relevance to permeability evolution in reactive fractures
  publication-title: Advances in Water Resources
– year: 1931
  ident: bib140
  article-title: Capillary conduction of liquids through porous mediums
  publication-title: Physics
– volume: 119
  start-page: 99
  year: 2011
  end-page: 112
  ident: bib74
  article-title: Modelling of an enhanced PAH attenuation experiment and associated biogeochemical changes at a former gasworks site in southern Germany
  publication-title: Journal of Contaminant Hydrology
– volume: 139
  start-page: 579
  year: 2021
  end-page: 593
  ident: bib72
  article-title: Relationship between microbial growth and hydraulic properties at the sub-pore scale
  publication-title: Transp. Porous Media
– volume: 3
  start-page: 1
  year: 1999
  end-page: 22
  ident: bib31
  publication-title: Annals of Software Engineering
– volume: 52
  start-page: 57
  year: 2001
  end-page: 83
  ident: bib144
  article-title: Predicting natural attenuation of xylene in groundwater using a numerical model
  publication-title: Journal of Contaminant Hydrology
– volume: 58
  start-page: 23
  year: 2005
  end-page: 41
  ident: bib179
  article-title: Predictive Pore-Scale Modeling of Single and Multiphase Flow
  publication-title: Transport in Porous Media
– volume: 18
  start-page: 60
  year: 2016
  end-page: 74
  ident: bib64
  article-title: OpenPNM: a pore network modeling package
  publication-title: Computing in Science Engineering
– volume: 85
  start-page: 381
  year: 2019
  end-page: 418
  ident: bib92
  article-title: Watershed reactive transport
  publication-title: Reviews in Mineralogy and Geochemistry
– volume: 45
  start-page: 18
  year: 2013
  end-page: 30
  ident: bib5
  article-title: Reactive transport modeling of the geothermal system at Bad Blumau, Austria: implications of the combined extraction of heat and CO2
  publication-title: Geothermics
– year: 2017
  ident: bib95
  article-title: Expanding the role of reactive transport models in critical zone processes
  publication-title: Earth-Science Reviews
– volume: 139
  start-page: 203
  year: 2021
  end-page: 221
  ident: bib81
  article-title: Pore-scale numerical investigation of evolving porosity and permeability driven by biofilm growth
  publication-title: Transport in Porous Media
– volume: 136
  year: 2022
  ident: bib86
  article-title: Quantification of mineral reactivity using machine learning interpretation of micro-XRF data
  publication-title: Applied Geochemistry: Journal of the International Association of Geochemistry and Cosmochemistry
– volume: 110
  start-page: 41
  year: 2015
  end-page: 79
  ident: bib7
  article-title: Pore-to-Core-Scale network modelling of $$\mathbfCO_\mathbf2$$ CO 2 migration in porous media
  publication-title: Transport in Porous Media
– volume: 8
  year: 2018
  ident: bib201
  article-title: The impact of drainage displacement patterns and haines jumps on CO2 storage efficiency
  publication-title: Scientific Reports
– volume: 94
  start-page: 859
  year: 2012
  end-page: 881
  ident: bib67
  article-title: An algorithm for 3D pore space reconstruction from a 2D image using sequential simulation and gradual deformation with the probability perturbation sampler
  publication-title: Transport in Porous Media
– volume: 55
  start-page: 7229
  year: 2019
  end-page: 7245
  ident: bib109
  article-title: Development of a reactive transport model for field‐scale simulation of microbially induced carbonate precipitation
  publication-title: Water Resources Research
– year: 2002
  ident: bib19
  article-title: Modelling of transport and biogeochemical processes in pollution plumes: vejen landfill, Denmark
  publication-title: Journal of Hydrology
– volume: 69
  start-page: 346
  year: 2014
  end-page: 358
  ident: bib56
  article-title: How the chemotactic characteristics of bacteria can determine their population patterns
  publication-title: Soil Biology & Biochemistry
– volume: 19
  start-page: 445
  year: 2015
  end-page: 478
  ident: bib166
  article-title: Reactive Transport Codes for Subsurface Environmental Simulation
– volume: 208
  year: 2020
  ident: bib32
  article-title: Reactive chemical transport simulations of geologic carbon sequestration: methods and applications
  publication-title: Earth-Science Reviews
– volume: 374
  year: 2021
  ident: bib114
  article-title: Physics-informed machine learning models for predicting the progress of reactive-mixing
  publication-title: Computer Methods in Applied Mechanics and Engineering
– year: 2016
  ident: bib132
  article-title: Estimation of 3-D pore network coordination number of rocks from watershed segmentation of a single 2-D image
  publication-title: Advances in Water Resources
– volume: 133
  start-page: 161
  year: 2020
  end-page: 204
  ident: bib90
  article-title: Accelerating reactive transport modeling: on-demand machine learning algorithm for chemical equilibrium calculations
  publication-title: Transport in Porous Media
– volume: 54
  start-page: 14609
  year: 2020
  end-page: 14616
  ident: bib189
  article-title: Quantification of CO2 mineralization at the wallula basalt pilot project
  publication-title: Environmental Science & Technology
– year: 2021
  ident: bib143
  article-title: Digital rock physics, chemistry, and biology: challenges and prospects of pore-scale modelling approach
  publication-title: Applied Geochemistry
– year: 2019
  ident: bib75
  article-title: Numerical Modeling of Reactive Transport and Self-Sealing Processes in the Fault-Controlled Geothermal System of the Guide Basin
– year: 2018
  ident: bib148
  article-title: Modelling Two-phase Flow at the Micro-scale Using a Volume-Of-Fluid Method
– year: 2018
  ident: bib120
  article-title: Olivine dissolution rates: a critical review
  publication-title: Chemical Geology
– volume: 19
  start-page: 403
  year: 2015
  end-page: 422
  ident: bib14
  article-title: ParCrunchFlow: an Efficient, Parallel Reactive Transport Simulation Tool for Physically and Chemically Heterogeneous Saturated Subsurface Environments
– volume: 42
  start-page: 23
  year: 2013
  end-page: 32
  ident: bib43
  article-title: Numerical study of non-uniqueness of the factors influencing relative permeability in heterogeneous porous media by Lattice Boltzmann method
  publication-title: International Journal of Heat and Fluid Flow
– volume: 517
  start-page: 1049
  year: 2014
  end-page: 1055
  ident: bib82
  article-title: Pore-scale study of dissolution-induced changes in permeability and porosity of porous media
  publication-title: Journal of Hydrology
– volume: 297
  start-page: 611
  year: 2015
  end-page: 636
  ident: bib1
  article-title: On the combined effects of surface tension force calculation and interface advection on spurious currents within volume of fluid and level set frameworks
  publication-title: Journal of Computational Physics
– year: 2013
  ident: bib141
  article-title: A channel network model as a framework for characterizing variably saturated flow in biofilm-affected soils
  publication-title: Vadose Zone Journal
– volume: 25
  start-page: 395
  year: 2021
  end-page: 410
  ident: bib164
  article-title: A model for discrete fracture-clay rock interaction incorporating electrostatic effects on transport
  publication-title: Computational Geosciences
– year: 2012
  ident: bib142
  article-title: The characterization of macroporous solids: an overview of the methodology
  publication-title: Microporous and Mesoporous Materials
– volume: 6
  start-page: 217
  year: 2001
  end-page: 222
  ident: bib20
  article-title: Theory, modeling and experiment in reactive transport in porous media
  publication-title: Current Opinion in Colloid & Interface Science
– year: 2016
  ident: bib153
  article-title: Micro-continuum approach for pore-scale simulation of subsurface processes
  publication-title: Transport in Porous Media
– volume: 145
  year: 2021
  ident: bib158
  article-title: porousMedia4Foam: multi-scale open-source platform for hydro-geochemical simulations with OpenFOAM
  publication-title: Environmental Modelling & Software
– year: 2019
  ident: bib171
  article-title: Pore-scale CO
  publication-title: Energy & Fuels
– year: 2012
  ident: bib149
  article-title: Characterizing vadose zone hydrocarbon biodegradation using carbon dioxide effluxes, isotopes, and reactive transport modeling
  publication-title: Vadose Zone Journal
– volume: 3
  year: 2022
  ident: bib162
  article-title: Pore-scale modeling of mineral growth and nucleation in reactive flow
  publication-title: Frontiers in Water
– volume: 212
  start-page: 14
  year: 2018
  end-page: 27
  ident: bib28
  article-title: Lattice Boltzmann simulations of liquid CO2 displacing water in a 2D heterogeneous micromodel at reservoir pressure conditions
  publication-title: Journal of Contaminant Hydrology
– volume: 38
  start-page: 326
  year: 2009
  end-page: 334
  ident: bib52
  article-title: Production Engineering in Geothermal Technology: A Review
– volume: 91
  start-page: 248
  year: 2013
  end-page: 257
  ident: bib37
  article-title: Upscaling retardation factor in hierarchical porous media with multimodal reactive mineral facies
  publication-title: Chemosphere
– volume: 105
  start-page: 16
  year: 2000
  ident: bib121
  article-title: Numerical modeling of reaction-induced cavities in a porous rock
  publication-title: Journal of Geophysical Research
– volume: 27
  year: 2015
  ident: bib98
  article-title: Lattice Boltzmann simulation of immiscible fluid displacement in porous media: homogeneous versus heterogeneous pore network
  publication-title: Physics of Fluids
– volume: 98
  start-page: 12
  year: 2017
  end-page: 20
  ident: bib57
  article-title: Introduction of a new platform for parameter estimation of kinetically complex environmental systems
  publication-title: Environmental Modelling and Software[R]
– volume: 49
  start-page: 8250
  year: 2013
  end-page: 8262
  ident: bib91
  article-title: Effect of wetness patchiness on evaporation dynamics from drying porous surfaces
  publication-title: Water Resources Research
– year: 2018
  ident: bib123
  article-title: Thin films in partial wetting: stability, dewetting and coarsening
  publication-title: Journal of Fluid Mechanics
– volume: 8
  year: 2020
  ident: bib24
  article-title: Multiphase flow modeling in multiscale porous media: an open-source micro-continuum approach
  publication-title: Journal of Computational Physics: X
– volume: 52
  start-page: 4137
  year: 2018
  end-page: 4144
  ident: bib46
  article-title: Isotope fractionation pinpoints membrane permeability as a barrier to atrazine biodegradation in gram-negative polaromonas sp. Nea-C
  publication-title: Environmental Science & Technology
– volume: 4
  start-page: 575
  year: 2010
  end-page: 582
  ident: bib48
  article-title: Limitations for brine acidification due to SO2 Co-injection in geologic carbon sequestration
  publication-title: International Journal of Greenhouse Gas Control
– volume: 53
  start-page: 1186
  year: 2019
  end-page: 1196
  ident: bib59
  article-title: Modeling of contaminant biodegradation and compound-specific isotope fractionation in chemostats at low dilution rates
  publication-title: Environmental Science & Technology
– volume: 561
  start-page: 494
  year: 2018
  end-page: 508
  ident: bib60
  article-title: Evaluating the hydraulic and transport properties of peat soil using pore network modeling and X-ray micro computed tomography
  publication-title: Journal of Hydrology
– year: 2012
  ident: bib167
  article-title: The impact of pore-size heterogeneities on the spatiotemporal variation of microbial metabolic activity in porous media
  publication-title: Soil Science
– volume: 239
  start-page: 374
  year: 2018
  end-page: 389
  ident: bib38
  article-title: Pore-scale numerical investigation of the impacts of surface roughness: upscaling of reaction rates in rough fractures
  publication-title: Geochimica et Cosmochimica Acta
– volume: 96
  year: 2017
  ident: bib134
  article-title: Generalized network modeling: network extraction as a coarse-scale discretization of the void space of porous media
  publication-title: Physical Review
– year: 2016
  ident: bib154
  article-title: The impact of sub-resolution porosity of X-ray microtomography images on the permeability
  publication-title: Transport in Porous Media
– volume: 53
  start-page: 38
  year: 2015
  end-page: 56
  ident: bib145
  article-title: An analysis platform for multiscale hydrogeologic modeling with emphasis on hybrid multiscale methods
  publication-title: Ground Water
– year: 1980
  ident: bib54
  article-title: A closed-form equation for predicting the hydraulic conductivity of unsaturated soils
  publication-title: Soil Science Society of America Journal
– year: 2019
  ident: bib66
  article-title: Multiscale formulation of pore-scale compressible Darcy-Stokes flow
  publication-title: Journal of Computational Physics
– year: 2015
  ident: bib199
  article-title: Lattice Boltzmann-based approaches for pore-scale reactive transport
  publication-title: Reviews in Mineralogy and Geochemistry
– year: 2010
  ident: bib137
  article-title: A new method for generating pore-network models of porous media
  publication-title: Transport in Porous Media
– volume: 123
  start-page: 164
  year: 2014
  end-page: 171
  ident: bib131
  article-title: An automated simple algorithm for realistic pore network extraction from micro-tomography images
  publication-title: Journal of Petroleum Science & Engineering
– volume: 110
  start-page: 3755
  year: 2013
  end-page: 3759
  ident: bib15
  article-title: Real-time 3D imaging of haines jumps in porous media flow
  publication-title: Proceedings of the National Academy of Sciences of the United States of America
– year: 2015
  ident: bib165
  article-title: Micro-continuum approaches for modeling pore-scale geochemical processes
  publication-title: Reviews in Mineralogy and Geochemistry
– volume: 44
  year: 2008
  ident: bib4
  article-title: Multiphase flow predictions from carbonate pore space images using extracted network models
  publication-title: Water Resources Research
– volume: 34
  start-page: 1140
  year: 2011
  end-page: 1150
  ident: bib10
  article-title: Hybrid models of reactive transport in porous and fractured media
  publication-title: Advances in Water Resources
– volume: 207
  start-page: 144
  year: 1956
  end-page: 181
  ident: bib50
  article-title: The network model of porous media
  publication-title: Transactions of the Society of Petroleum Engineers of the American Institute of Mining, Metallurgical, and Petroleum Engineers, Inc
– year: 2018
  ident: bib207
  article-title: Modeling the potential impacts of CO
  publication-title: Greenhouse Gases: Science and Technology
– year: 2021
  ident: bib208
  article-title: An advection-diffusion-mechanical deformation integral model to predict coal matrix methane permeability combining digital rock physics with laboratory measurements
  publication-title: Applied Geochemistry
– volume: 50
  start-page: 208
  year: 2014
  end-page: 228
  ident: bib69
  article-title: Evaluating the performance of parallel subsurface simulators: an illustrative example with PFLOTRAN
  publication-title: Water Resources Research
– volume: 75
  start-page: 244
  year: 2016
  end-page: 256
  ident: bib106
  article-title: Energy geotechnics: advances in subsurface energy recovery, storage, exchange, and waste management
  publication-title: Computers and Geotechnics
– volume: 200
  start-page: 1
  year: 2017
  end-page: 14
  ident: bib147
  article-title: Upscaling of nanoparticle transport in porous media under unfavorable conditions: pore scale to Darcy scale
  publication-title: Journal of Contaminant Hydrology
– year: 2019
  ident: bib161
  article-title: Reservoir scale reactive-transport modeling of a buoyancy-controlled CO2 plume with impurities (SO2, NO2, O2)
  publication-title: International Journal of Greenhouse Gas Control
– year: 2009
  ident: bib181
  article-title: Numerical solutions of some diffuse interface problems: the Cahn-Hilliard equation and the model of thomas and windle
  publication-title: International Journal for Multiscale Computational Engineering
– volume: 128
  start-page: 701
  year: 2019
  end-page: 721
  ident: bib110
  article-title: Multi-scale model of reactive transport in fractured media: diffusion limitations on rates
  publication-title: Transport in Porous Media
– volume: 45
  start-page: 103
  year: 2013
  end-page: 125
  ident: bib113
  article-title: Computations of absolute permeability on micro-CT images
  publication-title: Mathematical Geosciences
– volume: 49
  start-page: 7161
  year: 2015
  end-page: 7169
  ident: bib107
  article-title: Dynamics of suspended and attached aerobic toluene degraders in small-scale flow-through sediment systems under growth and starvation conditions
  publication-title: Environmental Science & Technology
– volume: 137
  year: 2022
  ident: bib41
  article-title: A reactive transport modeling perspective on the dynamics of interface-coupled dissolution-precipitation
  publication-title: Applied Geochemistry
– volume: 23
  start-page: 9
  year: 2006
  end-page: 19
  ident: bib61
  article-title: Mercury porosimetry: a general (practical) overview
  publication-title: Particle & Particle Systems Characterization
– year: 2013
  ident: bib172
  article-title: Pore-scale simulation of microbial growth using a genome-scale metabolic model: implications for Darcy-scale reactive transport
  publication-title: Advances in Water Resources
– year: 2011
  ident: bib150
  article-title: Microtomography and pore-scale modeling of two-phase fluid distribution
  publication-title: Transport in Porous Media
– year: 2022
  ident: bib211
  article-title: Pore-Scale Heterogeneities Improve the Degradation of a Self-Inhibiting Substrate: Insights from Reactive Transport Modeling
  publication-title: Environmental Science and Technology
– volume: 117
  start-page: 185
  year: 2014
  end-page: 204
  ident: bib122
  article-title: Micro-scale modeling of pesticide degradation coupled to carbon turnover in the detritusphere: model description and sensitivity analysis
  publication-title: Biogeochemistry
– volume: 36
  start-page: 397
  year: 2010
  end-page: 405
  ident: bib27
  article-title: GeoSysBRNS—a flexible multidimensional reactive transport model for simulating biogeochemical subsurface processes
  publication-title: Computers & Geosciences
– volume: 644
  start-page: 1036
  year: 2018
  end-page: 1043
  ident: bib195
  article-title: Microscale water distribution and its effects on organic carbon decomposition in unsaturated soils
  publication-title: The Science of the Total Environment
– year: 2014
  ident: bib146
  article-title: Image Processing of Multiphase Images Obtained via X-Ray Microtomography: A Review
– volume: 155
  start-page: 93
  year: 2016
  end-page: 128
  ident: bib21
  article-title: Imaging and image-based fluid transport modeling at the pore scale in geological materials: a practical introduction to the current state-of-the-art
  publication-title: Earth-Science Reviews
– volume: 140
  start-page: 181
  year: 2021
  end-page: 213
  ident: bib118
  article-title: Pore-scale imaging and modelling of reactive flow in evolving porous media: tracking the dynamics of the fluid–rock interface
  publication-title: Transport in Porous Media
– volume: 1
  start-page: 27
  year: 1949
  ident: bib18
  article-title: A calculation of the viscous force exerted by a flowing fluid on a dense swarm of particles
  publication-title: Flow, Turbulence and Combustion
– volume: 457
  start-page: 213
  year: 2002
  end-page: 254
  ident: bib62
  article-title: On the ability of a Darcy-scale model to capture wormhole formation during the dissolution of a porous medium
  publication-title: Journal of Fluid Mechanics
– volume: 55
  start-page: 8096
  year: 2019
  end-page: 8121
  ident: bib22
  article-title: A Darcy‐Brinkman‐Biot approach to modeling the hydrology and mechanics of porous media containing macropores and deformable microporous regions
  publication-title: Water Resources Research
– year: 2015
  ident: bib203
  article-title: Numerical simulation of porosity and permeability evolution of mount simon sandstone under geological carbon sequestration conditions
  publication-title: Chemical Geology
– volume: 108
  start-page: 2413
  year: 2011
  end-page: 2423
  ident: bib49
  article-title: Pore-network modeling of biofilm evolution in porous media
  publication-title: Biotechnology and Bioengineering
– volume: 49
  start-page: 99
  year: 2002
  end-page: 122
  ident: bib176
  article-title: Influence of microbial growth on hydraulic properties of pore networks
  publication-title: Transport in Porous Media
– year: 2016
  ident: bib163
  article-title: Three-dimensional simulations of fracture dissolution
  publication-title: Journal of Geophysical Research: Solid Earth
– volume: 54
  start-page: 930
  year: 2016
  end-page: 986
  ident: bib16
  article-title: Measurements and models of reactive transport in geological media
  publication-title: Reviews of Geophysics
– year: 2019
  ident: bib100
  article-title: A network model for the biofilm growth in porous media and its effects on permeability and porosity
  publication-title: Computing and Visualization in Science
– volume: 20
  year: 2021
  ident: bib63
  article-title: Pore‐scale modeling of microbial activity: what we have and what we need
  publication-title: Vadose Zone Journal: VZJ
– year: 2013
  ident: bib116
  article-title: Permeability Evolution Due to Dissolution and Precipitation of Carbonates Using Reactive Transport Modeling in Pore Networks
– volume: 57
  year: 2021
  ident: bib40
  article-title: A pore‐scale investigation of mineral precipitation driven diffusivity change at the column‐scale
  publication-title: Water Resources Research
– volume: 419
  start-page: 75
  issue: December
  year: 2015
  ident: 10.1016/j.apgeochem.2022.105445_bib178
  article-title: Reactive transport modeling of early diagenesis in a reservoir lake affected by acid mine drainage: trace metals, lake overturn, benthic fluxes and remediation
  publication-title: Chemical Geology
  doi: 10.1016/j.chemgeo.2015.10.023
– volume: 517
  start-page: 1049
  issue: September
  year: 2014
  ident: 10.1016/j.apgeochem.2022.105445_bib82
  article-title: Pore-scale study of dissolution-induced changes in permeability and porosity of porous media
  publication-title: Journal of Hydrology
  doi: 10.1016/j.jhydrol.2014.06.045
– year: 2021
  ident: 10.1016/j.apgeochem.2022.105445_bib197
  article-title: Recent progress in multi‐scale modeling and simulation of flow and solute transport in porous media
  publication-title: WIREs Water
– volume: 50
  start-page: 208
  issue: 1
  year: 2014
  ident: 10.1016/j.apgeochem.2022.105445_bib69
  article-title: Evaluating the performance of parallel subsurface simulators: an illustrative example with PFLOTRAN
  publication-title: Water Resources Research
  doi: 10.1002/2012WR013483
– volume: 9
  start-page: 80
  issue: 1
  year: 2021
  ident: 10.1016/j.apgeochem.2022.105445_bib51
  article-title: Accurate characterization of full pore size distribution of tight sandstones by low‐temperature nitrogen gas adsorption and high‐pressure mercury intrusion combination method
  publication-title: Energy Science & Engineering
  doi: 10.1002/ese3.817
– volume: 30
  start-page: 102
  issue: April
  year: 2012
  ident: 10.1016/j.apgeochem.2022.105445_bib55
  article-title: A reactive transport modeling approach to simulate biogeochemical processes in pore structures with pore-scale heterogeneities
  publication-title: Environmental Modelling & Software
  doi: 10.1016/j.envsoft.2011.10.010
– year: 2019
  ident: 10.1016/j.apgeochem.2022.105445_bib136
  article-title: Experimental characterization of coupled diffusion reaction mechanisms in low permeability chalk
  publication-title: Chemical Geology
  doi: 10.1016/j.chemgeo.2018.10.016
– volume: 80
  issue: 3 Pt 2
  year: 2009
  ident: 10.1016/j.apgeochem.2022.105445_bib42
  article-title: Pore-network extraction from micro-computerized-tomography images
  publication-title: Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics
– year: 2013
  ident: 10.1016/j.apgeochem.2022.105445_bib138
  article-title: PoreFlow: a complex pore-network model for simulation of reactive transport in variably saturated porous media
  publication-title: Computers & Geosciences
  doi: 10.1016/j.cageo.2013.08.005
– volume: 124
  issue: January
  year: 2021
  ident: 10.1016/j.apgeochem.2022.105445_bib130
  article-title: The impact of mineral reactive surface area variation on simulated mineral reactions and reaction rates
  publication-title: Applied Geochemistry: Journal of the International Association of Geochemistry and Cosmochemistry
– volume: vol. 2004
  year: 2004
  ident: 10.1016/j.apgeochem.2022.105445_bib124
– year: 2019
  ident: 10.1016/j.apgeochem.2022.105445_bib156
  article-title: Micro-continuum framework for pore-scale multiphase fluid transport in shale formations
  publication-title: Transport in Porous Media
  doi: 10.1007/s11242-018-1181-4
– volume: 207
  start-page: 144
  year: 1956
  ident: 10.1016/j.apgeochem.2022.105445_bib50
  article-title: The network model of porous media
  publication-title: Transactions of the Society of Petroleum Engineers of the American Institute of Mining, Metallurgical, and Petroleum Engineers, Inc
– volume: 53
  start-page: 3527
  year: 2017
  ident: 10.1016/j.apgeochem.2022.105445_bib26
– volume: 52
  start-page: 57
  issue: 1–4
  year: 2001
  ident: 10.1016/j.apgeochem.2022.105445_bib144
  article-title: Predicting natural attenuation of xylene in groundwater using a numerical model
  publication-title: Journal of Contaminant Hydrology
  doi: 10.1016/S0169-7722(01)00153-X
– volume: 54
  start-page: 14609
  issue: 22
  year: 2020
  ident: 10.1016/j.apgeochem.2022.105445_bib189
  article-title: Quantification of CO2 mineralization at the wallula basalt pilot project
  publication-title: Environmental Science & Technology
  doi: 10.1021/acs.est.0c05142
– year: 2012
  ident: 10.1016/j.apgeochem.2022.105445_bib34
  article-title: The dual arrhenius and michaelis-menten kinetics model for decomposition of soil organic matter at hourly to seasonal time scales
  publication-title: Global Change Biology
  doi: 10.1111/j.1365-2486.2011.02546.x
– volume: 20
  issue: 1
  year: 2021
  ident: 10.1016/j.apgeochem.2022.105445_bib63
  article-title: Pore‐scale modeling of microbial activity: what we have and what we need
  publication-title: Vadose Zone Journal: VZJ
  doi: 10.1002/vzj2.20087
– volume: 178
  start-page: 323
  issue: C
  year: 2016
  ident: 10.1016/j.apgeochem.2022.105445_bib115
  article-title: Multi-physical continuum models of thermochemical heat storage and transformation in porous media and powder beds—a review
  publication-title: Applied Energy
  doi: 10.1016/j.apenergy.2016.06.051
– volume: 110
  start-page: 3755
  issue: 10
  year: 2013
  ident: 10.1016/j.apgeochem.2022.105445_bib15
  article-title: Real-time 3D imaging of haines jumps in porous media flow
  publication-title: Proceedings of the National Academy of Sciences of the United States of America
  doi: 10.1073/pnas.1221373110
– volume: 27
  issue: 5
  year: 2015
  ident: 10.1016/j.apgeochem.2022.105445_bib98
  article-title: Lattice Boltzmann simulation of immiscible fluid displacement in porous media: homogeneous versus heterogeneous pore network
  publication-title: Physics of Fluids
  doi: 10.1063/1.4921611
– volume: 133
  start-page: 161
  issue: 2
  year: 2020
  ident: 10.1016/j.apgeochem.2022.105445_bib90
  article-title: Accelerating reactive transport modeling: on-demand machine learning algorithm for chemical equilibrium calculations
  publication-title: Transport in Porous Media
  doi: 10.1007/s11242-020-01412-1
– volume: 34
  start-page: 1140
  issue: 9
  year: 2011
  ident: 10.1016/j.apgeochem.2022.105445_bib10
  article-title: Hybrid models of reactive transport in porous and fractured media
  publication-title: Advances in Water Resources
  doi: 10.1016/j.advwatres.2011.01.012
– volume: 97
  issue: 2–1
  year: 2018
  ident: 10.1016/j.apgeochem.2022.105445_bib135
  article-title: Generalized network modeling of capillary-dominated two-phase flow
  publication-title: Physical Review
– volume: 128
  start-page: 701
  issue: 2
  year: 2019
  ident: 10.1016/j.apgeochem.2022.105445_bib110
  article-title: Multi-scale model of reactive transport in fractured media: diffusion limitations on rates
  publication-title: Transport in Porous Media
  doi: 10.1007/s11242-019-01266-2
– year: 2016
  ident: 10.1016/j.apgeochem.2022.105445_bib132
  article-title: Estimation of 3-D pore network coordination number of rocks from watershed segmentation of a single 2-D image
  publication-title: Advances in Water Resources
  doi: 10.1016/j.advwatres.2016.05.020
– volume: 11
  issue: January
  year: 2020
  ident: 10.1016/j.apgeochem.2022.105445_bib125
  article-title: MOOSE: enabling massively parallel multiphysics simulation
  publication-title: SoftwareX
– volume: 69
  start-page: 346
  issue: February
  year: 2014
  ident: 10.1016/j.apgeochem.2022.105445_bib56
  article-title: How the chemotactic characteristics of bacteria can determine their population patterns
  publication-title: Soil Biology & Biochemistry
  doi: 10.1016/j.soilbio.2013.11.019
– volume: 3
  issue: January
  year: 2022
  ident: 10.1016/j.apgeochem.2022.105445_bib162
  article-title: Pore-scale modeling of mineral growth and nucleation in reactive flow
  publication-title: Frontiers in Water
– volume: 49
  start-page: 99
  issue: 1
  year: 2002
  ident: 10.1016/j.apgeochem.2022.105445_bib176
  article-title: Influence of microbial growth on hydraulic properties of pore networks
  publication-title: Transport in Porous Media
  doi: 10.1023/A:1016030112089
– volume: 75
  start-page: 244
  issue: May
  year: 2016
  ident: 10.1016/j.apgeochem.2022.105445_bib106
  article-title: Energy geotechnics: advances in subsurface energy recovery, storage, exchange, and waste management
  publication-title: Computers and Geotechnics
  doi: 10.1016/j.compgeo.2016.01.002
– volume: 318–319
  start-page: 60
  issue: July
  year: 2012
  ident: 10.1016/j.apgeochem.2022.105445_bib119
  article-title: Upscaling calcium carbonate precipitation rates from pore to continuum scale
  publication-title: Chemical Geology
  doi: 10.1016/j.chemgeo.2012.05.014
– year: 2016
  ident: 10.1016/j.apgeochem.2022.105445_bib154
  article-title: The impact of sub-resolution porosity of X-ray microtomography images on the permeability
  publication-title: Transport in Porous Media
  doi: 10.1007/s11242-016-0690-2
– year: 2008
  ident: 10.1016/j.apgeochem.2022.105445_bib194
– volume: 94
  start-page: 859
  issue: 3
  year: 2012
  ident: 10.1016/j.apgeochem.2022.105445_bib67
  article-title: An algorithm for 3D pore space reconstruction from a 2D image using sequential simulation and gradual deformation with the probability perturbation sampler
  publication-title: Transport in Porous Media
  doi: 10.1007/s11242-012-0028-7
– volume: 145
  issue: November
  year: 2021
  ident: 10.1016/j.apgeochem.2022.105445_bib158
  article-title: porousMedia4Foam: multi-scale open-source platform for hydro-geochemical simulations with OpenFOAM
  publication-title: Environmental Modelling & Software
– volume: 49
  start-page: 7161
  issue: 12
  year: 2015
  ident: 10.1016/j.apgeochem.2022.105445_bib107
  article-title: Dynamics of suspended and attached aerobic toluene degraders in small-scale flow-through sediment systems under growth and starvation conditions
  publication-title: Environmental Science & Technology
  doi: 10.1021/es5058538
– year: 2019
  ident: 10.1016/j.apgeochem.2022.105445_bib171
  article-title: Pore-scale CO2 displacement simulation based on the three fluid phase Lattice Boltzmann method
  publication-title: Energy & Fuels
  doi: 10.1021/acs.energyfuels.9b01918
– volume: 208
  issue: September
  year: 2020
  ident: 10.1016/j.apgeochem.2022.105445_bib32
  article-title: Reactive chemical transport simulations of geologic carbon sequestration: methods and applications
  publication-title: Earth-Science Reviews
– volume: 55
  start-page: 8096
  issue: 10
  year: 2019
  ident: 10.1016/j.apgeochem.2022.105445_bib22
  article-title: A Darcy‐Brinkman‐Biot approach to modeling the hydrology and mechanics of porous media containing macropores and deformable microporous regions
  publication-title: Water Resources Research
  doi: 10.1029/2019WR024712
– volume: 43
  issue: 12
  year: 2007
  ident: 10.1016/j.apgeochem.2022.105445_bib97
  article-title: Upscaling pore-scale reactive transport equations using a multiscale continuum formulation
  publication-title: Water Resources Research
  doi: 10.1029/2006WR005664
– volume: 123
  start-page: 164
  issue: November
  year: 2014
  ident: 10.1016/j.apgeochem.2022.105445_bib131
  article-title: An automated simple algorithm for realistic pore network extraction from micro-tomography images
  publication-title: Journal of Petroleum Science & Engineering
  doi: 10.1016/j.petrol.2014.08.020
– volume: 291
  start-page: 126
  issue: December
  year: 2020
  ident: 10.1016/j.apgeochem.2022.105445_bib128
  article-title: Neural network based process coupling and parameter upscaling in reactive transport simulations
  publication-title: Geochimica et Cosmochimica Acta
  doi: 10.1016/j.gca.2020.07.019
– year: 2021
  ident: 10.1016/j.apgeochem.2022.105445_bib200
  article-title: Pore-scale study to analyze the impacts of porous media heterogeneity on mineral dissolution and acid transport using Darcy–brinkmann–Stokes method
  publication-title: Transport in Porous Media
  doi: 10.1007/s11242-021-01577-3
– year: 1931
  ident: 10.1016/j.apgeochem.2022.105445_bib140
  article-title: Capillary conduction of liquids through porous mediums
  publication-title: Physics
  doi: 10.1063/1.1745010
– volume: 45
  start-page: 103
  issue: 1
  year: 2013
  ident: 10.1016/j.apgeochem.2022.105445_bib113
  article-title: Computations of absolute permeability on micro-CT images
  publication-title: Mathematical Geosciences
  doi: 10.1007/s11004-012-9431-4
– year: 2018
  ident: 10.1016/j.apgeochem.2022.105445_bib148
– year: 1980
  ident: 10.1016/j.apgeochem.2022.105445_bib54
  article-title: A closed-form equation for predicting the hydraulic conductivity of unsaturated soils
  publication-title: Soil Science Society of America Journal
– volume: 239
  start-page: 374
  issue: October
  year: 2018
  ident: 10.1016/j.apgeochem.2022.105445_bib38
  article-title: Pore-scale numerical investigation of the impacts of surface roughness: upscaling of reaction rates in rough fractures
  publication-title: Geochimica et Cosmochimica Acta
  doi: 10.1016/j.gca.2018.08.005
– volume: 22
  start-page: 1543
  issue: 6
  year: 2018
  ident: 10.1016/j.apgeochem.2022.105445_bib99
  article-title: Conditions for upscalability of bioclogging in pore network models
  publication-title: Computational Geosciences
  doi: 10.1007/s10596-018-9773-1
– year: 2021
  ident: 10.1016/j.apgeochem.2022.105445_bib143
  article-title: Digital rock physics, chemistry, and biology: challenges and prospects of pore-scale modelling approach
  publication-title: Applied Geochemistry
  doi: 10.1016/j.apgeochem.2021.105028
– year: 2018
  ident: 10.1016/j.apgeochem.2022.105445_bib123
  article-title: Thin films in partial wetting: stability, dewetting and coarsening
  publication-title: Journal of Fluid Mechanics
– year: 2013
  ident: 10.1016/j.apgeochem.2022.105445_bib141
  article-title: A channel network model as a framework for characterizing variably saturated flow in biofilm-affected soils
  publication-title: Vadose Zone Journal
  doi: 10.2136/vzj2012.0079
– year: 2002
  ident: 10.1016/j.apgeochem.2022.105445_bib19
  article-title: Modelling of transport and biogeochemical processes in pollution plumes: vejen landfill, Denmark
  publication-title: Journal of Hydrology
– year: 2012
  ident: 10.1016/j.apgeochem.2022.105445_bib142
  article-title: The characterization of macroporous solids: an overview of the methodology
  publication-title: Microporous and Mesoporous Materials
  doi: 10.1016/j.micromeso.2011.09.031
– volume: 52
  start-page: 4137
  issue: 7
  year: 2018
  ident: 10.1016/j.apgeochem.2022.105445_bib46
  article-title: Isotope fractionation pinpoints membrane permeability as a barrier to atrazine biodegradation in gram-negative polaromonas sp. Nea-C
  publication-title: Environmental Science & Technology
  doi: 10.1021/acs.est.7b06599
– volume: 108
  start-page: 2413
  issue: 10
  year: 2011
  ident: 10.1016/j.apgeochem.2022.105445_bib49
  article-title: Pore-network modeling of biofilm evolution in porous media
  publication-title: Biotechnology and Bioengineering
  doi: 10.1002/bit.23183
– volume: 38
  start-page: 326
  year: 2009
  ident: 10.1016/j.apgeochem.2022.105445_bib52
– volume: 62
  start-page: 1
  issue: December
  year: 2013
  ident: 10.1016/j.apgeochem.2022.105445_bib12
  article-title: 2D and 3D imaging resolution trade-offs in quantifying pore throats for prediction of permeability
  publication-title: Advances in Water Resources
  doi: 10.1016/j.advwatres.2013.08.010
– year: 1989
  ident: 10.1016/j.apgeochem.2022.105445_bib151
  article-title: The use of gas adsorption for the characterization of porous solids
  publication-title: Colloids and Surfaces
  doi: 10.1016/0166-6622(89)80148-9
– volume: 48
  start-page: 105
  issue: May
  year: 2016
  ident: 10.1016/j.apgeochem.2022.105445_bib35
  article-title: Interaction between a fractured marl caprock and CO2-rich sulfate solution under supercritical CO2 conditions
  publication-title: International Journal of Greenhouse Gas Control
  doi: 10.1016/j.ijggc.2015.11.005
– volume: 42
  start-page: 1895
  issue: 18
  year: 2012
  ident: 10.1016/j.apgeochem.2022.105445_bib79
  article-title: Analysis of fundamentals of two-phase flow in porous media using dynamic pore-network models: a review
  publication-title: Critical Reviews in Environmental Science and Technology
  doi: 10.1080/10643389.2011.574101
– year: 2021
  ident: 10.1016/j.apgeochem.2022.105445_bib193
  article-title: Constraining fluid-rock interactions during eogenetic karst and their impacts on carbonate reservoirs: insights from reactive transport modeling
  publication-title: Applied Geochemistry
  doi: 10.1016/j.apgeochem.2021.105050
– volume: 11
  start-page: 3495
  issue: 1
  year: 2021
  ident: 10.1016/j.apgeochem.2022.105445_bib196
  article-title: Micro-continuum approach for mineral precipitation
  publication-title: Scientific Reports
  doi: 10.1038/s41598-021-82807-y
– volume: 54
  start-page: 930
  issue: 4
  year: 2016
  ident: 10.1016/j.apgeochem.2022.105445_bib16
  article-title: Measurements and models of reactive transport in geological media
  publication-title: Reviews of Geophysics
  doi: 10.1002/2016RG000524
– year: 2005
  ident: 10.1016/j.apgeochem.2022.105445_bib139
  article-title: S-GeMS: the stanford geostatistical modeling software: a tool for new algorithms development
  publication-title: Geostatistics Banff 2004
  doi: 10.1007/978-1-4020-3610-1_89
– volume: 205
  start-page: 31
  issue: May
  year: 2017
  ident: 10.1016/j.apgeochem.2022.105445_bib13
  article-title: Evaluation of accessible mineral surface areas for improved prediction of mineral reaction rates in porous media
  publication-title: Geochimica et Cosmochimica Acta
  doi: 10.1016/j.gca.2017.02.006
– volume: 55
  start-page: 7229
  issue: 8
  year: 2019
  ident: 10.1016/j.apgeochem.2022.105445_bib109
  article-title: Development of a reactive transport model for field‐scale simulation of microbially induced carbonate precipitation
  publication-title: Water Resources Research
  doi: 10.1029/2019WR025153
– year: 2016
  ident: 10.1016/j.apgeochem.2022.105445_bib163
  article-title: Three-dimensional simulations of fracture dissolution
  publication-title: Journal of Geophysical Research: Solid Earth
  doi: 10.1002/2016JB013321
– year: 2014
  ident: 10.1016/j.apgeochem.2022.105445_bib146
– year: 2018
  ident: 10.1016/j.apgeochem.2022.105445_bib76
  article-title: The HPx software for multicomponent reactive transport during variably-saturated flow: recent developments and applications
  publication-title: Journal of Hydrology and Hydromechanics
  doi: 10.1515/johh-2017-0049
– year: 2018
  ident: 10.1016/j.apgeochem.2022.105445_bib152
  article-title: Permeability and mineral composition evolution of primary seal and reservoir rocks in geologic carbon storage conditions
  publication-title: Environmental Engineering Science
  doi: 10.1089/ees.2017.0197
– volume: 29
  start-page: 1351
  issue: 9
  year: 2006
  ident: 10.1016/j.apgeochem.2022.105445_bib94
  article-title: Upscaling geochemical reaction rates using pore-scale network modeling
  publication-title: Advances in Water Resources
  doi: 10.1016/j.advwatres.2005.10.011
– volume: 111
  start-page: 6
  issue: January
  year: 2018
  ident: 10.1016/j.apgeochem.2022.105445_bib101
  article-title: Direct pore-scale reactive transport modelling of dynamic wettability changes induced by surface complexation
  publication-title: Advances in Water Resources
  doi: 10.1016/j.advwatres.2017.10.032
– volume: 155
  start-page: 93
  issue: April
  year: 2016
  ident: 10.1016/j.apgeochem.2022.105445_bib21
  article-title: Imaging and image-based fluid transport modeling at the pore scale in geological materials: a practical introduction to the current state-of-the-art
  publication-title: Earth-Science Reviews
  doi: 10.1016/j.earscirev.2016.02.001
– year: 2017
  ident: 10.1016/j.apgeochem.2022.105445_bib155
  article-title: Mineral dissolution and wormholing from a pore-scale perspective
  publication-title: Journal of Fluid Mechanics
  doi: 10.1017/jfm.2017.499
– volume: 18
  start-page: 60
  issue: 4
  year: 2016
  ident: 10.1016/j.apgeochem.2022.105445_bib64
  article-title: OpenPNM: a pore network modeling package
  publication-title: Computing in Science Engineering
  doi: 10.1109/MCSE.2016.49
– volume: 25
  start-page: 945
  issue: 8
  year: 2002
  ident: 10.1016/j.apgeochem.2022.105445_bib9
  article-title: Modelling the fate of oxidisable organic contaminants in groundwater
  publication-title: Advances in Water Resources
  doi: 10.1016/S0309-1708(02)00044-1
– volume: 42
  start-page: 23
  issue: August
  year: 2013
  ident: 10.1016/j.apgeochem.2022.105445_bib43
  article-title: Numerical study of non-uniqueness of the factors influencing relative permeability in heterogeneous porous media by Lattice Boltzmann method
  publication-title: International Journal of Heat and Fluid Flow
  doi: 10.1016/j.ijheatfluidflow.2013.01.020
– volume: 57
  start-page: 1
  issue: February
  year: 2017
  ident: 10.1016/j.apgeochem.2022.105445_bib8
  article-title: Adsorption-induced swelling of porous media
  publication-title: International Journal of Greenhouse Gas Control
  doi: 10.1016/j.ijggc.2016.12.011
– volume: 9
  start-page: 24
  issue: July
  year: 2012
  ident: 10.1016/j.apgeochem.2022.105445_bib6
  article-title: Multidimensional reactive transport modeling of CO2 mineral sequestration in basalts at the hellisheidi geothermal field, Iceland
  publication-title: International Journal of Greenhouse Gas Control
  doi: 10.1016/j.ijggc.2012.02.006
– volume: 17
  start-page: 1131
  issue: 04
  year: 2012
  ident: 10.1016/j.apgeochem.2022.105445_bib112
  article-title: Simulation of flow and dispersion on pore-space images
  publication-title: SPE Journal
  doi: 10.2118/135261-PA
– year: 2022
  ident: 10.1016/j.apgeochem.2022.105445_bib85
  article-title: Should we worry about surficial dynamics when assessing nutrient cycling in the groundwater?
  publication-title: Frontiers in Water
  doi: 10.3389/frwa.2022.780297
– volume: 96
  issue: 1–1
  year: 2017
  ident: 10.1016/j.apgeochem.2022.105445_bib134
  article-title: Generalized network modeling: network extraction as a coarse-scale discretization of the void space of porous media
  publication-title: Physical Review
– year: 2010
  ident: 10.1016/j.apgeochem.2022.105445_bib137
  article-title: A new method for generating pore-network models of porous media
  publication-title: Transport in Porous Media
  doi: 10.1007/s11242-009-9412-3
– volume: 45
  start-page: 18
  issue: January
  year: 2013
  ident: 10.1016/j.apgeochem.2022.105445_bib5
  article-title: Reactive transport modeling of the geothermal system at Bad Blumau, Austria: implications of the combined extraction of heat and CO2
  publication-title: Geothermics
  doi: 10.1016/j.geothermics.2012.08.002
– volume: 3
  start-page: 247
  issue: 3
  year: 1999
  ident: 10.1016/j.apgeochem.2022.105445_bib175
  article-title: Modeling of a field experiment on bioremediation of chlorobenzenes in groundwater
  publication-title: Bioremediation Journal
  doi: 10.1080/10889869991219352
– volume: 161
  issue: March
  year: 2022
  ident: 10.1016/j.apgeochem.2022.105445_bib25
  article-title: The impact of sub-resolution porosity on numerical simulations of multiphase flow
  publication-title: Advances in Water Resources
– volume: 80
  start-page: 247
  issue: 1
  year: 2015
  ident: 10.1016/j.apgeochem.2022.105445_bib117
  article-title: Resolving time-dependent evolution of pore-scale structure, permeability and reactivity using X-ray microtomography
  publication-title: Reviews in Mineralogy and Geochemistry
  doi: 10.2138/rmg.2015.80.08
– volume: 38
  start-page: 1284
  issue: 5
  year: 2009
  ident: 10.1016/j.apgeochem.2022.105445_bib30
  article-title: Industrial applications of metal–organic frameworks
  publication-title: Chemical Society Reviews
  doi: 10.1039/b804680h
– year: 2013
  ident: 10.1016/j.apgeochem.2022.105445_bib172
  article-title: Pore-scale simulation of microbial growth using a genome-scale metabolic model: implications for Darcy-scale reactive transport
  publication-title: Advances in Water Resources
  doi: 10.1016/j.advwatres.2013.05.007
– year: 2018
  ident: 10.1016/j.apgeochem.2022.105445_bib207
  article-title: Modeling the potential impacts of CO2sequestration on shallow groundwater: the fate of trace metals and organic compounds before and after leakage stops
  publication-title: Greenhouse Gases: Science and Technology
  doi: 10.1002/ghg.1728
– year: 2013
  ident: 10.1016/j.apgeochem.2022.105445_bib190
  article-title: X-ray imaging and analysis techniques for quantifying pore-scale structure and processes in subsurface porous medium systems
  publication-title: Advances in Water Resources
  doi: 10.1016/j.advwatres.2012.07.018
– year: 2022
  ident: 10.1016/j.apgeochem.2022.105445_bib84
  article-title: Predicting the impact of spatial heterogeneity on microbially mediated nutrient cycling in the subsurface
  publication-title: Biogeosciences
  doi: 10.5194/bg-19-665-2022
– year: 2009
  ident: 10.1016/j.apgeochem.2022.105445_bib170
  article-title: Wormhole formation in dissolving fractures
  publication-title: Journal of Geophysical Research
  doi: 10.1029/2008JB006122
– volume: 8
  issue: September
  year: 2020
  ident: 10.1016/j.apgeochem.2022.105445_bib24
  article-title: Multiphase flow modeling in multiscale porous media: an open-source micro-continuum approach
  publication-title: Journal of Computational Physics: X
– volume: 38
  start-page: 109
  issue: 3
  year: 2021
  ident: 10.1016/j.apgeochem.2022.105445_bib39
  article-title: Addressing water and energy challenges with reactive transport modeling
  publication-title: Environmental Engineering Science
  doi: 10.1089/ees.2021.0009
– volume: 3
  start-page: 1
  issue: 1
  year: 1999
  ident: 10.1016/j.apgeochem.2022.105445_bib31
  publication-title: Annals of Software Engineering
– volume: 3
  issue: January
  year: 2022
  ident: 10.1016/j.apgeochem.2022.105445_bib96
  article-title: The effect of pore-scale two-phase flow on mineral reaction rates
  publication-title: Frontiers in Water
– volume: 303
  issue: December
  year: 2021
  ident: 10.1016/j.apgeochem.2022.105445_bib205
  article-title: Application of upscaling methods for fluid flow and mass transport in multi-scale heterogeneous media: a critical review
  publication-title: Applied Energy
– volume: 25
  start-page: 1285
  issue: 4
  year: 2021
  ident: 10.1016/j.apgeochem.2022.105445_bib111
  article-title: Simulation of mineral dissolution at the pore scale with evolving fluid-solid interfaces: review of approaches and benchmark problem set
  publication-title: Computational Geosciences
  doi: 10.1007/s10596-019-09903-x
– volume: 190
  start-page: 405
  issue: November
  year: 2018
  ident: 10.1016/j.apgeochem.2022.105445_bib103
  article-title: A new compressive scheme to simulate species transfer across fluid interfaces using the volume-of-fluid method
  publication-title: Chemical Engineering Science
  doi: 10.1016/j.ces.2018.06.026
– year: 2022
  ident: 10.1016/j.apgeochem.2022.105445_bib211
  article-title: Pore-Scale Heterogeneities Improve the Degradation of a Self-Inhibiting Substrate: Insights from Reactive Transport Modeling
  publication-title: Environmental Science and Technology
  doi: 10.1021/acs.est.2c01433
– volume: 125
  start-page: 55
  year: 2019
  ident: 10.1016/j.apgeochem.2022.105445_bib209
  article-title: From core-scale experiment to reservoir-scale modeling: A scale-up approach to investigate reaction-induced permeability evolution of CO2 storage reservoir and caprock at a US CO2 storage site
  publication-title: Computers & Geosciences
  doi: 10.1016/j.cageo.2019.01.006
– year: 2013
  ident: 10.1016/j.apgeochem.2022.105445_bib116
– year: 2019
  ident: 10.1016/j.apgeochem.2022.105445_bib161
  article-title: Reservoir scale reactive-transport modeling of a buoyancy-controlled CO2 plume with impurities (SO2, NO2, O2)
  publication-title: International Journal of Greenhouse Gas Control
  doi: 10.1016/j.ijggc.2019.06.026
– volume: 15
  start-page: 125
  year: 2010
  ident: 10.1016/j.apgeochem.2022.105445_bib129
  article-title: Investigating matrix/fracture transfer via a level set method for drainage and imbibition
  publication-title: SPE Journal
  doi: 10.2118/116110-PA
– volume: 95
  start-page: 246
  year: 2016
  ident: 10.1016/j.apgeochem.2022.105445_bib47
  article-title: 3D mapping of calcite and a demonstration of its relevance to permeability evolution in reactive fractures
  publication-title: Advances in Water Resources
  doi: 10.1016/j.advwatres.2015.07.023
– year: 2018
  ident: 10.1016/j.apgeochem.2022.105445_bib120
  article-title: Olivine dissolution rates: a critical review
  publication-title: Chemical Geology
  doi: 10.1016/j.chemgeo.2018.10.008
– year: 2019
  ident: 10.1016/j.apgeochem.2022.105445_bib66
  article-title: Multiscale formulation of pore-scale compressible Darcy-Stokes flow
  publication-title: Journal of Computational Physics
  doi: 10.1016/j.jcp.2019.07.047
– year: 2012
  ident: 10.1016/j.apgeochem.2022.105445_bib198
  article-title: Pore-scale simulation of mixing-induced calcium carbonate precipitation and dissolution in a microfluidic pore network
  publication-title: Water Resources Research
  doi: 10.1029/2011WR011192
– volume: 57
  issue: 5
  year: 2021
  ident: 10.1016/j.apgeochem.2022.105445_bib40
  article-title: A pore‐scale investigation of mineral precipitation driven diffusivity change at the column‐scale
  publication-title: Water Resources Research
  doi: 10.1029/2020WR028483
– volume: 140
  start-page: 181
  issue: 1
  year: 2021
  ident: 10.1016/j.apgeochem.2022.105445_bib118
  article-title: Pore-scale imaging and modelling of reactive flow in evolving porous media: tracking the dynamics of the fluid–rock interface
  publication-title: Transport in Porous Media
  doi: 10.1007/s11242-021-01613-2
– year: 2012
  ident: 10.1016/j.apgeochem.2022.105445_bib167
  article-title: The impact of pore-size heterogeneities on the spatiotemporal variation of microbial metabolic activity in porous media
  publication-title: Soil Science
  doi: 10.1097/SS.0b013e318241105d
– year: 1995
  ident: 10.1016/j.apgeochem.2022.105445_bib188
  article-title: Chapter 1. Chemical weathering rates of silicate minerals: an overview
  publication-title: Chemical Weathering Rates of Silicate Minerals
– year: 2022
  ident: 10.1016/j.apgeochem.2022.105445_bib45
– volume: 8
  start-page: 3333
  issue: 10
  year: 2015
  ident: 10.1016/j.apgeochem.2022.105445_bib73
  article-title: A parallelization scheme to simulate reactive transport in the subsurface environment with OGS#IPhreeqc 5.5.7-3.1.2
  publication-title: Geoscientific Model Development
  doi: 10.5194/gmd-8-3333-2015
– volume: 32
  start-page: 1543
  issue: 10
  year: 2009
  ident: 10.1016/j.apgeochem.2022.105445_bib77
  article-title: Application of GA in optimization of pore network models generated by multi-cellular growth algorithms
  publication-title: Advances in Water Resources
  doi: 10.1016/j.advwatres.2009.07.007
– volume: 644
  start-page: 1036
  issue: December
  year: 2018
  ident: 10.1016/j.apgeochem.2022.105445_bib195
  article-title: Microscale water distribution and its effects on organic carbon decomposition in unsaturated soils
  publication-title: The Science of the Total Environment
  doi: 10.1016/j.scitotenv.2018.06.365
– volume: 99
  start-page: 1337
  issue: 6
  year: 2008
  ident: 10.1016/j.apgeochem.2022.105445_bib173
  article-title: Computational pore network modeling of the influence of biofilm permeability on bioclogging in porous media
  publication-title: Biotechnology and Bioengineering
  doi: 10.1002/bit.21708
– year: 2015
  ident: 10.1016/j.apgeochem.2022.105445_bib203
  article-title: Numerical simulation of porosity and permeability evolution of mount simon sandstone under geological carbon sequestration conditions
  publication-title: Chemical Geology
  doi: 10.1016/j.chemgeo.2015.03.014
– volume: 85
  start-page: 49
  issue: 1
  year: 2019
  ident: 10.1016/j.apgeochem.2022.105445_bib36
  article-title: Modeling reactive transport processes in fractures
  publication-title: Reviews in Mineralogy and Geochemistry
  doi: 10.2138/rmg.2019.85.3
– volume: 113
  start-page: 1
  issue: 1
  year: 2010
  ident: 10.1016/j.apgeochem.2022.105445_bib186
  article-title: A review of non-invasive imaging methods and applications in contaminant hydrogeology research
  publication-title: Journal of Contaminant Hydrology
  doi: 10.1016/j.jconhyd.2010.01.001
– volume: 119
  start-page: 99
  issue: 1–4
  year: 2011
  ident: 10.1016/j.apgeochem.2022.105445_bib74
  article-title: Modelling of an enhanced PAH attenuation experiment and associated biogeochemical changes at a former gasworks site in southern Germany
  publication-title: Journal of Contaminant Hydrology
  doi: 10.1016/j.jconhyd.2010.09.012
– volume: 38
  start-page: 13
  issue: 9
  year: 2002
  ident: 10.1016/j.apgeochem.2022.105445_bib105
  article-title: Multicomponent reactive transport modeling in variably saturated porous media using a generalized formulation for kinetically controlled reactions
  publication-title: Water Resources Research
– year: 2022
  ident: 10.1016/j.apgeochem.2022.105445_bib202
  article-title: Investigation of coupled processes in fractures and the bordering matrix via a micro‐continuum reactive transport model
  publication-title: Water Resources Research
– volume: 561
  start-page: 494
  issue: June
  year: 2018
  ident: 10.1016/j.apgeochem.2022.105445_bib60
  article-title: Evaluating the hydraulic and transport properties of peat soil using pore network modeling and X-ray micro computed tomography
  publication-title: Journal of Hydrology
  doi: 10.1016/j.jhydrol.2018.04.007
– volume: 67
  start-page: 589
  issue: 2
  year: 2012
  ident: 10.1016/j.apgeochem.2022.105445_bib87
  article-title: OpenGeoSys: an open-source initiative for numerical simulation of thermo-hydro-mechanical/chemical (THM/C) processes in porous media
  publication-title: Environmental Earth Sciences
  doi: 10.1007/s12665-012-1546-x
– year: 2019
  ident: 10.1016/j.apgeochem.2022.105445_bib75
– year: 2019
  ident: 10.1016/j.apgeochem.2022.105445_bib159
  article-title: Collapse of reacted fracture surface decreases permeability and frictional strength
  publication-title: Journal of Geophysical Research: Solid Earth
  doi: 10.1029/2019JB017805
– year: 1986
  ident: 10.1016/j.apgeochem.2022.105445_bib187
  article-title: Flow in porous media I: a theoretical derivation of Darcy's law
  publication-title: Transport in Porous Media
  doi: 10.1007/BF01036523
– volume: 457
  start-page: 213
  issue: April
  year: 2002
  ident: 10.1016/j.apgeochem.2022.105445_bib62
  article-title: On the ability of a Darcy-scale model to capture wormhole formation during the dissolution of a porous medium
  publication-title: Journal of Fluid Mechanics
  doi: 10.1017/S0022112002007735
– volume: 6
  start-page: 217
  issue: 3
  year: 2001
  ident: 10.1016/j.apgeochem.2022.105445_bib20
  article-title: Theory, modeling and experiment in reactive transport in porous media
  publication-title: Current Opinion in Colloid & Interface Science
  doi: 10.1016/S1359-0294(01)00088-7
– volume: 91
  start-page: 248
  issue: 3
  year: 2013
  ident: 10.1016/j.apgeochem.2022.105445_bib37
  article-title: Upscaling retardation factor in hierarchical porous media with multimodal reactive mineral facies
  publication-title: Chemosphere
  doi: 10.1016/j.chemosphere.2012.10.105
– year: 2012
  ident: 10.1016/j.apgeochem.2022.105445_bib149
  article-title: Characterizing vadose zone hydrocarbon biodegradation using carbon dioxide effluxes, isotopes, and reactive transport modeling
  publication-title: Vadose Zone Journal
  doi: 10.2136/vzj2011.0204
– volume: 98
  start-page: 12
  issue: December
  year: 2017
  ident: 10.1016/j.apgeochem.2022.105445_bib57
  article-title: Introduction of a new platform for parameter estimation of kinetically complex environmental systems
  publication-title: Environmental Modelling and Software[R]
  doi: 10.1016/j.envsoft.2017.09.005
– volume: 19
  start-page: 445
  year: 2015
  ident: 10.1016/j.apgeochem.2022.105445_bib166
– volume: 19
  start-page: 403
  year: 2015
  ident: 10.1016/j.apgeochem.2022.105445_bib14
– year: 2017
  ident: 10.1016/j.apgeochem.2022.105445_bib191
  article-title: Quantification of CO2-cement-rock interactions at the well-caprock-reservoir interface and implications for geological CO2 storage
  publication-title: International Journal of Greenhouse Gas Control
  doi: 10.1016/j.ijggc.2017.05.009
– volume: 60
  start-page: 2993
  issue: 16
  year: 1996
  ident: 10.1016/j.apgeochem.2022.105445_bib184
  article-title: A multicomponent reactive transport model of early diagenesis: application to redox cycling in coastal marine sediments
  publication-title: Geochimica et Cosmochimica Acta
  doi: 10.1016/0016-7037(96)00140-8
– year: 2017
  ident: 10.1016/j.apgeochem.2022.105445_bib95
  article-title: Expanding the role of reactive transport models in critical zone processes
  publication-title: Earth-Science Reviews
– volume: 25
  start-page: 395
  year: 2021
  ident: 10.1016/j.apgeochem.2022.105445_bib164
  article-title: A model for discrete fracture-clay rock interaction incorporating electrostatic effects on transport
  publication-title: Computational Geosciences
  doi: 10.1007/s10596-020-10012-3
– volume: 58
  start-page: 23
  year: 2005
  ident: 10.1016/j.apgeochem.2022.105445_bib179
  article-title: Predictive Pore-Scale Modeling of Single and Multiphase Flow
  publication-title: Transport in Porous Media
  doi: 10.1007/s11242-004-5468-2
– volume: 85
  start-page: 381
  issue: 1
  year: 2019
  ident: 10.1016/j.apgeochem.2022.105445_bib92
  article-title: Watershed reactive transport
  publication-title: Reviews in Mineralogy and Geochemistry
  doi: 10.2138/rmg.2018.85.13
– volume: 139
  start-page: 579
  year: 2021
  ident: 10.1016/j.apgeochem.2022.105445_bib72
  article-title: Relationship between microbial growth and hydraulic properties at the sub-pore scale
  publication-title: Transp. Porous Media
  doi: 10.1007/s11242-021-01680-5
– volume: 51
  start-page: 197
  issue: January
  year: 2013
  ident: 10.1016/j.apgeochem.2022.105445_bib17
  article-title: Pore-scale imaging and modelling
  publication-title: Advances in Water Resources
  doi: 10.1016/j.advwatres.2012.03.003
– volume: 212
  start-page: 14
  issue: May
  year: 2018
  ident: 10.1016/j.apgeochem.2022.105445_bib28
  article-title: Lattice Boltzmann simulations of liquid CO2 displacing water in a 2D heterogeneous micromodel at reservoir pressure conditions
  publication-title: Journal of Contaminant Hydrology
  doi: 10.1016/j.jconhyd.2017.09.005
– year: 2021
  ident: 10.1016/j.apgeochem.2022.105445_bib208
  article-title: An advection-diffusion-mechanical deformation integral model to predict coal matrix methane permeability combining digital rock physics with laboratory measurements
  publication-title: Applied Geochemistry
  doi: 10.1016/j.apgeochem.2020.104861
– volume: 123
  start-page: 1
  issue: August
  year: 2013
  ident: 10.1016/j.apgeochem.2022.105445_bib29
  article-title: High-resolution X-ray computed tomography in geosciences: a review of the current technology and applications
  publication-title: Earth-Science Reviews
  doi: 10.1016/j.earscirev.2013.04.003
– year: 2013
  ident: 10.1016/j.apgeochem.2022.105445_bib133
– volume: 105
  start-page: 16
  issue: July
  year: 2000
  ident: 10.1016/j.apgeochem.2022.105445_bib121
  article-title: Numerical modeling of reaction-induced cavities in a porous rock
  publication-title: Journal of Geophysical Research
– volume: 265
  start-page: 198
  issue: 1–2
  year: 2009
  ident: 10.1016/j.apgeochem.2022.105445_bib126
  article-title: Accessibilities of reactive minerals in consolidated sedimentary rock: an imaging study of three sandstones
  publication-title: Chemical Geology
  doi: 10.1016/j.chemgeo.2008.11.014
– volume: 62
  start-page: 330
  issue: February
  year: 2019
  ident: 10.1016/j.apgeochem.2022.105445_bib58
  article-title: Simulating the chemical kinetics of CO2-methane exchange in hydrate
  publication-title: Journal of Natural Gas Science and Engineering
  doi: 10.1016/j.jngse.2018.12.018
– year: 2018
  ident: 10.1016/j.apgeochem.2022.105445_bib108
  article-title: ‘Microbial mortar’-restoration of degraded marble structures with microbially induced carbonate precipitation
  publication-title: Construction and Building Materials
  doi: 10.1016/j.conbuildmat.2018.05.200
– year: 2021
  ident: 10.1016/j.apgeochem.2022.105445_bib157
  article-title: Computational microfluidics for geosciences
  publication-title: Frontiers in Water 3 (March)
  doi: 10.3389/frwa.2021.643714
– year: 2013
  ident: 10.1016/j.apgeochem.2022.105445_bib169
  article-title: Bioclogging and permeability alteration by L. Mesenteroides in a sandstone reservoir: a reactive transport modeling study
  publication-title: Energy & Fuels
  doi: 10.1021/ef401446f
– volume: 201
  start-page: 6
  issue: June
  year: 2017
  ident: 10.1016/j.apgeochem.2022.105445_bib180
  article-title: Elucidating the fate of a mixed toluene, DHM, methanol, and I-propanol plume during in situ bioremediation
  publication-title: Journal of Contaminant Hydrology
  doi: 10.1016/j.jconhyd.2017.04.002
– volume: 41
  issue: 2
  year: 2005
  ident: 10.1016/j.apgeochem.2022.105445_bib3
  article-title: Transport modeling of nonlinearly adsorbing solutes in physically heterogeneous pore networks
  publication-title: Water Resources Research
  doi: 10.1029/2004WR003500
– volume: 1
  start-page: 27
  issue: 1
  year: 1949
  ident: 10.1016/j.apgeochem.2022.105445_bib18
  article-title: A calculation of the viscous force exerted by a flowing fluid on a dense swarm of particles
  publication-title: Flow, Turbulence and Combustion
  doi: 10.1007/BF02120313
– year: 2011
  ident: 10.1016/j.apgeochem.2022.105445_bib68
  article-title: A multiple-point statistics algorithm for 3D pore space reconstruction from 2D images
  publication-title: Advances in Water Resources
  doi: 10.1016/j.advwatres.2011.06.003
– year: 2004
  ident: 10.1016/j.apgeochem.2022.105445_bib70
  article-title: Mgstat: a geostatistical matlab toolbox
  publication-title: Online Web Resource
– year: 2016
  ident: 10.1016/j.apgeochem.2022.105445_bib153
  article-title: Micro-continuum approach for pore-scale simulation of subsurface processes
  publication-title: Transport in Porous Media
  doi: 10.1007/s11242-016-0701-3
– volume: 50
  start-page: 9599
  issue: 17
  year: 2016
  ident: 10.1016/j.apgeochem.2022.105445_bib204
  article-title: Biodegradation kinetics of 1,4-dioxane in chlorinated solvent mixtures
  publication-title: Environmental Science & Technology
  doi: 10.1021/acs.est.6b02797
– year: 2013
  ident: 10.1016/j.apgeochem.2022.105445_bib78
– volume: 49
  start-page: 8250
  issue: 12
  year: 2013
  ident: 10.1016/j.apgeochem.2022.105445_bib91
  article-title: Effect of wetness patchiness on evaporation dynamics from drying porous surfaces
  publication-title: Water Resources Research
  doi: 10.1002/2013WR013737
– volume: 137
  year: 2022
  ident: 10.1016/j.apgeochem.2022.105445_bib41
  article-title: A reactive transport modeling perspective on the dynamics of interface-coupled dissolution-precipitation
  publication-title: Applied Geochemistry
  doi: 10.1016/j.apgeochem.2022.105207
– year: 2010
  ident: 10.1016/j.apgeochem.2022.105445_bib71
  article-title: Lattice Boltzmann simulations of water transport in gas diffusion layer of a polymer electrolyte membrane fuel cell
  publication-title: Journal of Power Sources
  doi: 10.1016/j.jpowsour.2009.11.125
– volume: 110
  start-page: 41
  issue: 1
  year: 2015
  ident: 10.1016/j.apgeochem.2022.105445_bib7
  article-title: Pore-to-Core-Scale network modelling of $$\mathbfCO_\mathbf2$$ CO 2 migration in porous media
  publication-title: Transport in Porous Media
  doi: 10.1007/s11242-015-0556-z
– year: 1972
  ident: 10.1016/j.apgeochem.2022.105445_bib11
– volume: 8
  issue: 1
  year: 2018
  ident: 10.1016/j.apgeochem.2022.105445_bib201
  article-title: The impact of drainage displacement patterns and haines jumps on CO2 storage efficiency
  publication-title: Scientific Reports
  doi: 10.1038/s41598-018-33502-y
– volume: 117
  start-page: 185
  issue: 1
  year: 2014
  ident: 10.1016/j.apgeochem.2022.105445_bib122
  article-title: Micro-scale modeling of pesticide degradation coupled to carbon turnover in the detritusphere: model description and sensitivity analysis
  publication-title: Biogeochemistry
  doi: 10.1007/s10533-013-9851-3
– volume: 46
  start-page: 4989
  issue: 26
  year: 2003
  ident: 10.1016/j.apgeochem.2022.105445_bib83
  article-title: The role of porous media in modeling flow and heat transfer in biological tissues
  publication-title: International Journal of Heat and Mass Transfer
  doi: 10.1016/S0017-9310(03)00301-6
– year: 2012
  ident: 10.1016/j.apgeochem.2022.105445_bib182
  article-title: Developing a robust geochemical and reactive transport model to evaluate possible sources of arsenic at the CO2 sequestration natural analog site in chimayo, New Mexico
  publication-title: International Journal of Greenhouse Gas Control
  doi: 10.1016/j.ijggc.2012.06.007
– year: 2010
  ident: 10.1016/j.apgeochem.2022.105445_bib183
  article-title: Quantification of soil structure based on minkowski functions
  publication-title: Computers & Geosciences
  doi: 10.1016/j.cageo.2010.03.007
– volume: 136
  issue: January
  year: 2022
  ident: 10.1016/j.apgeochem.2022.105445_bib86
  article-title: Quantification of mineral reactivity using machine learning interpretation of micro-XRF data
  publication-title: Applied Geochemistry: Journal of the International Association of Geochemistry and Cosmochemistry
– volume: 224
  issue: July
  year: 2019
  ident: 10.1016/j.apgeochem.2022.105445_bib80
  article-title: Upscaling of microbially driven first-order reactions in heterogeneous porous media
  publication-title: Journal of Contaminant Hydrology
– volume: 36
  start-page: 397
  issue: 3
  year: 2010
  ident: 10.1016/j.apgeochem.2022.105445_bib27
  article-title: GeoSysBRNS—a flexible multidimensional reactive transport model for simulating biogeochemical subsurface processes
  publication-title: Computers & Geosciences
  doi: 10.1016/j.cageo.2009.06.009
– volume: 374
  issue: February
  year: 2021
  ident: 10.1016/j.apgeochem.2022.105445_bib114
  article-title: Physics-informed machine learning models for predicting the progress of reactive-mixing
  publication-title: Computer Methods in Applied Mechanics and Engineering
– year: 2015
  ident: 10.1016/j.apgeochem.2022.105445_bib165
  article-title: Micro-continuum approaches for modeling pore-scale geochemical processes
  publication-title: Reviews in Mineralogy and Geochemistry
  doi: 10.2138/rmg.2015.80.07
– volume: 116
  start-page: 13799
  issue: 28
  year: 2019
  ident: 10.1016/j.apgeochem.2022.105445_bib206
  article-title: Comprehensive comparison of pore-scale models for multiphase flow in porous media
  publication-title: Proceedings of the National Academy of Sciences of the United States of America
  doi: 10.1073/pnas.1901619116
– volume: 139
  start-page: 271
  issue: 2
  year: 2021
  ident: 10.1016/j.apgeochem.2022.105445_bib102
  article-title: GeoChemFoam: direct modelling of multiphase reactive transport in real pore geometries with equilibrium reactions
  publication-title: Transport in Porous Media
  doi: 10.1007/s11242-021-01661-8
– volume: 56
  issue: 8
  year: 2020
  ident: 10.1016/j.apgeochem.2022.105445_bib53
  article-title: Efficiency and accuracy of micro‐macro models for mineral dissolution
  publication-title: Water Resources Research
  doi: 10.1029/2020WR027585
– start-page: 265
  year: 2019
  ident: 10.1016/j.apgeochem.2022.105445_bib174
  article-title: 9. Microbial controls on the biogeochemical dynamics in the subsurface
– volume: 125
  start-page: 19
  issue: April
  year: 2019
  ident: 10.1016/j.apgeochem.2022.105445_bib33
  article-title: Convection-diffusion-reaction of CO2-enriched brine in porous media: a pore-scale study
  publication-title: Computers & Geosciences
  doi: 10.1016/j.cageo.2019.01.009
– volume: 200
  start-page: 1
  issue: May
  year: 2017
  ident: 10.1016/j.apgeochem.2022.105445_bib147
  article-title: Upscaling of nanoparticle transport in porous media under unfavorable conditions: pore scale to Darcy scale
  publication-title: Journal of Contaminant Hydrology
  doi: 10.1016/j.jconhyd.2017.03.002
– volume: 23
  start-page: 9
  issue: 1
  year: 2006
  ident: 10.1016/j.apgeochem.2022.105445_bib61
  article-title: Mercury porosimetry: a general (practical) overview
  publication-title: Particle & Particle Systems Characterization
  doi: 10.1002/ppsc.200601009
– year: 1998
  ident: 10.1016/j.apgeochem.2022.105445_bib185
  article-title: A tensorial approach to computational continuum mechanics using object-oriented techniques
  publication-title: Computers in Physics
  doi: 10.1063/1.168744
– year: 2017
  ident: 10.1016/j.apgeochem.2022.105445_bib192
  article-title: An improved pore-network model including viscous coupling effects using direct simulation by the Lattice Boltzmann method
  publication-title: Advances in Water Resources
  doi: 10.1016/j.advwatres.2016.11.017
– volume: 569
  start-page: 366
  issue: June
  year: 2020
  ident: 10.1016/j.apgeochem.2022.105445_bib2
  article-title: Pore-scale study of water salinity effect on thin-film stability for a moving oil droplet
  publication-title: Journal of Colloid and Interface Science
  doi: 10.1016/j.jcis.2020.02.044
– volume: 73
  issue: 1
  year: 2022
  ident: 10.1016/j.apgeochem.2022.105445_bib127
  article-title: Accounting for soil architecture and microbial dynamics in microscale models: current practices in soil science and the path ahead
  publication-title: European Journal of Soil Science
  doi: 10.1111/ejss.13142
– volume: 53
  start-page: 38
  issue: 1
  year: 2015
  ident: 10.1016/j.apgeochem.2022.105445_bib145
  article-title: An analysis platform for multiscale hydrogeologic modeling with emphasis on hybrid multiscale methods
  publication-title: Ground Water
  doi: 10.1111/gwat.12179
– volume: 53
  start-page: 1186
  issue: 3
  year: 2019
  ident: 10.1016/j.apgeochem.2022.105445_bib59
  article-title: Modeling of contaminant biodegradation and compound-specific isotope fractionation in chemostats at low dilution rates
  publication-title: Environmental Science & Technology
  doi: 10.1021/acs.est.8b02498
– year: 2011
  ident: 10.1016/j.apgeochem.2022.105445_bib150
  article-title: Microtomography and pore-scale modeling of two-phase fluid distribution
  publication-title: Transport in Porous Media
  doi: 10.1007/s11242-010-9636-2
– year: 2018
  ident: 10.1016/j.apgeochem.2022.105445_bib65
  article-title: Image-based micro-continuum model for gas flow in organic-rich shale rock
  publication-title: Advances in Water Resources
  doi: 10.1016/j.advwatres.2018.10.004
– year: 2019
  ident: 10.1016/j.apgeochem.2022.105445_bib100
  article-title: A network model for the biofilm growth in porous media and its effects on permeability and porosity
  publication-title: Computing and Visualization in Science
  doi: 10.1007/s00791-019-00316-y
– volume: 57
  issue: 8
  year: 2021
  ident: 10.1016/j.apgeochem.2022.105445_bib160
  article-title: Integrating process‐based reactive transport modeling and machine learning for electrokinetic remediation of contaminated groundwater
  publication-title: Water Resources Research
  doi: 10.1029/2021WR029959
– year: 2009
  ident: 10.1016/j.apgeochem.2022.105445_bib181
  article-title: Numerical solutions of some diffuse interface problems: the Cahn-Hilliard equation and the model of thomas and windle
  publication-title: International Journal for Multiscale Computational Engineering
  doi: 10.1615/IntJMultCompEng.v7.i6.40
– volume: 30
  start-page: 1
  issue: 1
  year: 1998
  ident: 10.1016/j.apgeochem.2022.105445_bib168
  article-title: Network model of flow, transport and biofilm effects in porous media
  publication-title: Transport in Porous Media
  doi: 10.1023/A:1006560705680
– year: 2015
  ident: 10.1016/j.apgeochem.2022.105445_bib199
  article-title: Lattice Boltzmann-based approaches for pore-scale reactive transport
  publication-title: Reviews in Mineralogy and Geochemistry
  doi: 10.2138/rmg.2015.80.12
– volume: 297
  start-page: 611
  issue: September
  year: 2015
  ident: 10.1016/j.apgeochem.2022.105445_bib1
  article-title: On the combined effects of surface tension force calculation and interface advection on spurious currents within volume of fluid and level set frameworks
  publication-title: Journal of Computational Physics
  doi: 10.1016/j.jcp.2015.04.054
– year: 2021
  ident: 10.1016/j.apgeochem.2022.105445_bib88
  article-title: Reactive transport modelling of push-pull tests: a versatile approach to quantify aquifer reactivity
  publication-title: Applied Geochemistry
  doi: 10.1016/j.apgeochem.2021.104998
– volume: 157
  start-page: 630
  issue: June
  year: 2019
  ident: 10.1016/j.apgeochem.2022.105445_bib89
  article-title: Natural source zone depletion of LNAPL: a critical review supporting modelling approaches
  publication-title: Water Research
  doi: 10.1016/j.watres.2019.04.001
– volume: 44
  issue: 6
  year: 2008
  ident: 10.1016/j.apgeochem.2022.105445_bib4
  article-title: Multiphase flow predictions from carbonate pore space images using extracted network models
  publication-title: Water Resources Research
  doi: 10.1029/2006WR005695
– year: 2001
  ident: 10.1016/j.apgeochem.2022.105445_bib44
  article-title: Simulations of two-dimensional modeling of biomass aggregate growth in network models
  publication-title: Water Resources Research
  doi: 10.1029/2001WR000310
– volume: 139
  start-page: 203
  issue: 2
  year: 2021
  ident: 10.1016/j.apgeochem.2022.105445_bib81
  article-title: Pore-scale numerical investigation of evolving porosity and permeability driven by biofilm growth
  publication-title: Transport in Porous Media
  doi: 10.1007/s11242-021-01654-7
– volume: 112
  start-page: 45
  issue: 1–4
  year: 2010
  ident: 10.1016/j.apgeochem.2022.105445_bib93
  article-title: Andreas englert, and susan S. Hubbard. 2010. “Effects of physical and geochemical heterogeneities on mineral transformation and biomass accumulation during biostimulation experiments at rifle, Colorado
  publication-title: Journal of Contaminant Hydrology
  doi: 10.1016/j.jconhyd.2009.10.006
– volume: 69
  start-page: 5005
  issue: 21
  year: 2005
  ident: 10.1016/j.apgeochem.2022.105445_bib177
  article-title: Modeling the impact of microbial activity on redox dynamics in porous media
  publication-title: Geochimica et Cosmochimica Acta
  doi: 10.1016/j.gca.2005.04.026
– volume: 70
  start-page: 337
  issue: 2
  year: 2006
  ident: 10.1016/j.apgeochem.2022.105445_bib104
  article-title: The mineral dissolution rate conundrum: insights from reactive transport modeling of U isotopes and pore fluid chemistry in marine sediments
  publication-title: Geochimica et Cosmochimica Acta
  doi: 10.1016/j.gca.2005.09.001
– volume: 4
  start-page: 575
  issue: 3
  year: 2010
  ident: 10.1016/j.apgeochem.2022.105445_bib48
  article-title: Limitations for brine acidification due to SO2 Co-injection in geologic carbon sequestration
  publication-title: International Journal of Greenhouse Gas Control
  doi: 10.1016/j.ijggc.2009.11.006
– volume: 19
  start-page: 917
  issue: 6
  year: 2004
  ident: 10.1016/j.apgeochem.2022.105445_bib210
  article-title: Numerical simulation of CO2 disposal by mineral trapping in deep aquifers
  publication-title: Applied Geochemistry
  doi: 10.1016/j.apgeochem.2003.11.003
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Snippet In many practical geochemical systems that are at the center of providing indispensable energy, resources and service to our society, (bio)geochemical...
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SubjectTerms Coupled processes
deformation
Earth Sciences
energy
Fluid mechanics
Geochemical dynamics
Geochemistry
Geophysics
Mechanics
Multi-scale
Physics
Porous media
Reactive transport modeling
Sciences of the Universe
Title A perspective on applied geochemistry in porous media: Reactive transport modeling of geochemical dynamics and the interplay with flow phenomena and physical alteration
URI https://dx.doi.org/10.1016/j.apgeochem.2022.105445
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