Draft Genome Sequence of Leifsonia poae Strain BS71, Isolated from a Drought Microcosm

We report the draft genome sequence of Leifsonia poae strain BS71. This bacterium was isolated from a low soil moisture content model soil microcosm inoculated with forest soil that had been subject to chronic warming. We report the draft genome sequence of Leifsonia poae strain BS71. This bacterium...

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Published inMicrobiology resource announcements Vol. 11; no. 1; p. e0095121
Main Authors Ahmed, Hanaa, DeAngelis, Kristen M., Morrow, Maureen A.
Format Journal Article
LanguageEnglish
Published United States American Society for Microbiology 20.01.2022
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ISSN2576-098X
2576-098X
DOI10.1128/mra.00951-21

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Abstract We report the draft genome sequence of Leifsonia poae strain BS71. This bacterium was isolated from a low soil moisture content model soil microcosm inoculated with forest soil that had been subject to chronic warming. We report the draft genome sequence of Leifsonia poae strain BS71. This bacterium was isolated from a low soil moisture content model soil microcosm inoculated with forest soil that had been subject to chronic warming.
AbstractList We report the draft genome sequence of Leifsonia poae strain BS71. This bacterium was isolated from a low soil moisture content model soil microcosm inoculated with forest soil that had been subject to chronic warming.
We report the draft genome sequence of Leifsonia poae strain BS71. This bacterium was isolated from a low soil moisture content model soil microcosm inoculated with forest soil that had been subject to chronic warming.We report the draft genome sequence of Leifsonia poae strain BS71. This bacterium was isolated from a low soil moisture content model soil microcosm inoculated with forest soil that had been subject to chronic warming.
We report the draft genome sequence of Leifsonia poae strain BS71. This bacterium was isolated from a low soil moisture content model soil microcosm inoculated with forest soil that had been subject to chronic warming.
We report the draft genome sequence of Leifsonia poae strain BS71. This bacterium was isolated from a low soil moisture content model soil microcosm inoculated with forest soil that had been subject to chronic warming. We report the draft genome sequence of Leifsonia poae strain BS71. This bacterium was isolated from a low soil moisture content model soil microcosm inoculated with forest soil that had been subject to chronic warming.
Author DeAngelis, Kristen M.
Morrow, Maureen A.
Ahmed, Hanaa
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References e_1_3_2_9_2
e_1_3_2_8_2
e_1_3_2_7_2
Lane DJ (e_1_3_2_5_2) 1991
e_1_3_2_6_2
e_1_3_2_10_2
e_1_3_2_11_2
e_1_3_2_4_2
e_1_3_2_12_2
e_1_3_2_3_2
e_1_3_2_13_2
e_1_3_2_2_2
Pokhrel, Y, Felfelani, F, Satoh, Y, Boulange, J, Burek, P, Gädeke, A, Gerten, D, Gosling, SN, Grillakis, M, Gudmundsson, L, Hanasaki, N, Kim, H, Koutroulis, A, Liu, J, Papadimitriou, L, Schewe, J, Müller Schmied, H, Stacke, T, Telteu, C-E, Thiery, W, Veldkamp, T, Zhao, F, Wada, Y (B1) 2021; 11
Murali, A, Bhargava, A, Wright, ES (B5) 2018; 6
Arkin, AP, Cottingham, RW, Henry, CS, Harris, NL, Stevens, RL, Maslov, S, Dehal, P, Ware, D, Perez, F, Canon, S, Sneddon, MW, Henderson, ML, Riehl, WJ, Murphy-Olson, D, Chan, SY, Kamimura, RT, Kumari, S, Drake, MM, Brettin, TS, Glass, EM, Chivian, D, Gunter, D, Weston, DJ, Allen, BH, Baumohl, J, Best, AA, Bowen, B, Brenner, SE, Bun, CC, Chandonia, J-M, Chia, J-M, Colasanti, R, Conrad, N, Davis, JJ, Davison, BH, DeJongh, M, Devoid, S, Dietrich, E, Dubchak, I, Edirisinghe, JN, Fang, G, Faria, JP, Frybarger, PM, Gerlach, W, Gerstein, M, Greiner, A, Gurtowski, J, Haun, HL, He, F, Jain, R, Joachimiak, MP, Keegan, KP, Kondo, S (B8) 2018; 36
Chen, I-MA, Chu, K, Palaniappan, K, Pillay, M, Ratner, A, Huang, J, Huntemann, M, Varghese, N, White, JR, Seshadri, R, Smirnova, T, Kirton, E, Jungbluth, SP, Woyke, T, Eloe-Fadrosh, EA, Ivanova, NN, Kyrpides, NC (B10) 2019; 47
Lane, DJ, Stackebrandt, E, Goodfellow, M (B4) 1991
Parks, DH, Imelfort, M, Skennerton, CT, Hugenholtz, P, Tyson, GW (B7) 2015; 25
Hyatt, D, Chen, G-L, LoCascio, PF, Land, ML, Larimer, FW, Hauser, LJ (B11) 2010; 11
Huntemann, M, Ivanova, NN, Mavromatis, K, Tripp, HJ, Paez-Espino, D, Palaniappan, K, Szeto, E, Pillay, M, Chen, I-MA, Pati, A, Nielsen, T, Markowitz, VM, Kyrpides, NC (B9) 2015; 10
Koren, S, Walenz, BP, Berlin, K, Miller, JR, Bergman, NH, Phillippy, AM (B6) 2017; 27
Melillo, JM, Frey, SD, DeAngelis, KM, Werner, WJ, Bernard, MJ, Bowles, FP, Pold, G, Knorr, MA, Grandy, AS (B2) 2017; 358
Domeignoz-Horta, LA, Pold, G, Liu, X-JA, Frey, SD, Melillo, JM, DeAngelis, KM (B3) 2020; 11
Ketudat Cairns, JR, Esen, A (B12) 2010; 67
References_xml – ident: e_1_3_2_3_2
  doi: 10.1126/science.aan2874
– ident: e_1_3_2_6_2
  doi: 10.1186/s40168-018-0521-5
– ident: e_1_3_2_10_2
  doi: 10.1186/s40793-015-0077-y
– ident: e_1_3_2_11_2
  doi: 10.1093/nar/gky901
– start-page: 115
  volume-title: Nucleic acid techniques in bacterial systematics.
  year: 1991
  ident: e_1_3_2_5_2
– ident: e_1_3_2_9_2
  doi: 10.1038/nbt.4163
– ident: e_1_3_2_12_2
  doi: 10.1186/1471-2105-11-119
– ident: e_1_3_2_4_2
  doi: 10.1038/s41467-020-17502-z
– ident: e_1_3_2_13_2
  doi: 10.1007/s00018-010-0399-2
– ident: e_1_3_2_7_2
  doi: 10.1101/gr.215087.116
– ident: e_1_3_2_2_2
  doi: 10.1038/s41558-020-00972-w
– ident: e_1_3_2_8_2
  doi: 10.1101/gr.186072.114
– volume: 11
  start-page: 3684
  year: 2020
  ident: B3
  article-title: Microbial diversity drives carbon use efficiency in a model soil
  publication-title: Nat Commun
  doi: 10.1038/s41467-020-17502-z
– volume: 10
  start-page: 86
  year: 2015
  ident: B9
  article-title: The standard operating procedure of the DOE-JGI Microbial Genome Annotation Pipeline (MGAP v.4)
  publication-title: Stand Genomic Sci
  doi: 10.1186/s40793-015-0077-y
– volume: 47
  start-page: D666
  year: 2019
  end-page: D677
  ident: B10
  article-title: IMG/M v.5.0: an integrated data management and comparative analysis system for microbial genomes and microbiomes
  publication-title: Nucleic Acids Res
  doi: 10.1093/nar/gky901
– volume: 27
  start-page: 722
  year: 2017
  end-page: 736
  ident: B6
  article-title: Canu: scalable and accurate long-read assembly via adaptive k-mer weighting and repeat separation
  publication-title: Genome Res
  doi: 10.1101/gr.215087.116
– volume: 11
  start-page: 226
  year: 2021
  end-page: 233
  ident: B1
  article-title: Global terrestrial water storage and drought severity under climate change
  publication-title: Nat Clim Chang
  doi: 10.1038/s41558-020-00972-w
– volume: 11
  start-page: 119
  year: 2010
  ident: B11
  article-title: Prodigal: prokaryotic gene recognition and translation initiation site identification
  publication-title: BMC Bioinformatics
  doi: 10.1186/1471-2105-11-119
– volume: 6
  start-page: 140
  year: 2018
  ident: B5
  article-title: IDTAXA: a novel approach for accurate taxonomic classification of microbiome sequences
  publication-title: Microbiome
  doi: 10.1186/s40168-018-0521-5
– volume: 67
  start-page: 3389
  year: 2010
  end-page: 3405
  ident: B12
  article-title: β-Glucosidases
  publication-title: Cell Mol Life Sci
  doi: 10.1007/s00018-010-0399-2
– start-page: 115
  year: 1991
  end-page: 175
  ident: B4
  article-title: 16S/23S rRNA Sequencing
  publication-title: Nucleic acid techniques in bacterial systematics. ;John Wiley and Sons ;New York, NY
– volume: 36
  start-page: 566
  year: 2018
  end-page: 569
  ident: B8
  article-title: KBase: the United States Department of Energy Systems Biology Knowledgebase
  publication-title: Nat Biotechnol
  doi: 10.1038/nbt.4163
– volume: 358
  start-page: 101
  year: 2017
  end-page: 105
  ident: B2
  article-title: Long-term pattern and magnitude of soil carbon feedback to the climate system in a warming world
  publication-title: Science
  doi: 10.1126/science.aan2874
– volume: 25
  start-page: 1043
  year: 2015
  end-page: 1055
  ident: B7
  article-title: CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes
  publication-title: Genome Res
  doi: 10.1101/gr.186072.114
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Snippet We report the draft genome sequence of Leifsonia poae strain BS71. This bacterium was isolated from a low soil moisture content model soil microcosm inoculated...
We report the draft genome sequence of Leifsonia poae strain BS71. This bacterium was isolated from a low soil moisture content model soil microcosm inoculated...
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SubjectTerms Genome Sequences
Genomics and Proteomics
Title Draft Genome Sequence of Leifsonia poae Strain BS71, Isolated from a Drought Microcosm
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