Oxygen-Dependent Morphogenesis of Modern Clumped Photosynthetic Mats and Implications for the Archean Stromatolite Record

Some modern filamentous oxygenic photosynthetic bacteria (cyanobacteria) form macroscopic tufts, laminated cones and ridges that are very similar to some Archean and Proterozoic stromatolites. However, it remains unclear whether microbes that constructed Archean clumps, tufts, cones and ridges also...

Full description

Saved in:
Bibliographic Details
Published inGeosciences (Basel) Vol. 2; no. 4; pp. 235 - 259
Main Authors Sim, Min Sub, Liang, Biqing, Petroff, Alexander P., Evans, Alexander, Klepac-Ceraj, Vanja, Flannery, David T., Walter, Malcolm R., Bosak, Tanja
Format Journal Article
LanguageEnglish
Published Basel MDPI AG 01.12.2012
Subjects
Online AccessGet full text

Cover

Loading…
Abstract Some modern filamentous oxygenic photosynthetic bacteria (cyanobacteria) form macroscopic tufts, laminated cones and ridges that are very similar to some Archean and Proterozoic stromatolites. However, it remains unclear whether microbes that constructed Archean clumps, tufts, cones and ridges also produced oxygen. Here, we address this question by examining the physiology of cyanobacterial clumps, aggregates ~0.5 mm in diameter that initiate the growth of modern mm- and cm-scale cones. Clumps contain more particulate organic carbon in the form of denser, bowed and bent cyanobacterial filaments, abandoned sheaths and non-cyanobacterial cells relative to the surrounding areas. Increasing concentrations of oxygen in the solution enhance the bending of filaments and the persistence of clumps by reducing the lateral migration of filaments away from clumps. Clumped mats in oxic media also release less glycolate, a soluble photorespiration product, and retain a larger pool of carbon in the mat. Clumping thus benefits filamentous mat builders whose incorporation of inorganic carbon is sensitive to oxygen. The morphogenetic sequence of mm-scale clumps, reticulate ridges and conical stromatolites from the 2.7 Ga Tumbiana Formation likely records similar O2-dependent behaviors, preserving currently the oldest morphological signature of oxygenated environments on Early Earth.
AbstractList Some modern filamentous oxygenic photosynthetic bacteria (cyanobacteria) form macroscopic tufts, laminated cones and ridges that are very similar to some Archean and Proterozoic stromatolites. However, it remains unclear whether microbes that constructed Archean clumps, tufts, cones and ridges also produced oxygen. Here, we address this question by examining the physiology of cyanobacterial clumps, aggregates ~0.5 mm in diameter that initiate the growth of modern mm- and cm-scale cones. Clumps contain more particulate organic carbon in the form of denser, bowed and bent cyanobacterial filaments, abandoned sheaths and non-cyanobacterial cells relative to the surrounding areas. Increasing concentrations of oxygen in the solution enhance the bending of filaments and the persistence of clumps by reducing the lateral migration of filaments away from clumps. Clumped mats in oxic media also release less glycolate, a soluble photorespiration product, and retain a larger pool of carbon in the mat. Clumping thus benefits filamentous mat builders whose incorporation of inorganic carbon is sensitive to oxygen. The morphogenetic sequence of mm-scale clumps, reticulate ridges and conical stromatolites from the 2.7 Ga Tumbiana Formation likely records similar O2-dependent behaviors, preserving currently the oldest morphological signature of oxygenated environments on Early Earth.
Author Liang, Biqing
Walter, Malcolm R.
Evans, Alexander
Petroff, Alexander P.
Klepac-Ceraj, Vanja
Sim, Min Sub
Flannery, David T.
Bosak, Tanja
Author_xml – sequence: 1
  givenname: Min Sub
  surname: Sim
  fullname: Sim, Min Sub
– sequence: 2
  givenname: Biqing
  surname: Liang
  fullname: Liang, Biqing
– sequence: 3
  givenname: Alexander P.
  surname: Petroff
  fullname: Petroff, Alexander P.
– sequence: 4
  givenname: Alexander
  surname: Evans
  fullname: Evans, Alexander
– sequence: 5
  givenname: Vanja
  surname: Klepac-Ceraj
  fullname: Klepac-Ceraj, Vanja
– sequence: 6
  givenname: David T.
  surname: Flannery
  fullname: Flannery, David T.
– sequence: 7
  givenname: Malcolm R.
  surname: Walter
  fullname: Walter, Malcolm R.
– sequence: 8
  givenname: Tanja
  surname: Bosak
  fullname: Bosak, Tanja
BookMark eNp9UctqHDEQFMGGOLZ_ICdBzpPoPTNHs3kt2DjYyVlopNaulllpImnB-_dRvAmEBNKXboqqorr7FTqLKQJCryl5y_lI3m0gFRsgWiiMCMK4fIEuGOlVx5niZ3_ML9F1KTvSaqR84OICHe-fjhuI3XtYIDqIFd-lvGxTw6CEgpNvgIMc8Wo-7Bdw-Ms21VSOsW6hBovvTC3YRIfX-2UO1tSQYsE-ZdwI-CbbLZiIH2tOe1PTHCrgB7Apuyt07s1c4PpXv0TfPn74uvrc3d5_Wq9ubjsjyFC7wQ6M9QDEEjGSSQIFy5iSRAppeu-U8LY3ZpRKNP7Qi2nijEwOBBV8Ep5fovXJ1yWz00sOe5OPOpmgn4GUN9rktskMWnlggxeUqZEKpabJqlFJ7sykFCPD2LzenLyWnL4foFS9S4ccW3xNJRMjpz2RjTWcWDanUjJ4bUN9PkzNJsyaEv3zb_rfvzUp-0v6O_B_RD8AylyiDw
CitedBy_id crossref_primary_10_1016_j_sedgeo_2020_105702
crossref_primary_10_1038_s43017_021_00169_5
crossref_primary_10_1016_j_gca_2017_01_015
crossref_primary_10_1111_gbi_12623
crossref_primary_10_1016_j_freeradbiomed_2019_07_014
crossref_primary_10_22201_igl_05437652e_2018_7_1_217
crossref_primary_10_1016_j_epsl_2014_04_036
crossref_primary_10_1029_2017JE005478
crossref_primary_10_1038_ngeo3006
crossref_primary_10_1144_SP556_2024_1
crossref_primary_10_1016_j_sedgeo_2017_09_013
crossref_primary_10_1017_S1089332600002680
crossref_primary_10_1016_j_precamres_2020_105734
crossref_primary_10_1038_s41522_017_0041_2
crossref_primary_10_1016_j_palwor_2022_06_003
crossref_primary_10_1016_j_precamres_2015_04_018
crossref_primary_10_1215_00382876_3424753
crossref_primary_10_1073_pnas_1415718112
crossref_primary_10_1098_rspb_2021_0675
crossref_primary_10_1134_S207908642201008X
crossref_primary_10_1111_pala_12211
crossref_primary_10_1111_gbi_12138
crossref_primary_10_1134_S0869593822010051
crossref_primary_10_1146_annurev_earth_042711_105327
crossref_primary_10_1016_j_freeradbiomed_2019_05_036
crossref_primary_10_1111_gbi_12274
crossref_primary_10_1111_gbi_12296
crossref_primary_10_1016_j_precamres_2023_107135
crossref_primary_10_1146_annurev_earth_072020_055249
crossref_primary_10_1016_j_precamres_2016_03_004
crossref_primary_10_1371_journal_pone_0088142
crossref_primary_10_3390_geosciences9080359
crossref_primary_10_1016_j_earscirev_2020_103296
crossref_primary_10_1093_femsec_fiad099
crossref_primary_10_1016_j_gca_2018_10_014
crossref_primary_10_2110_jsr_2017_79
Cites_doi 10.1128/aem.50.2.373-382.1985
10.1007/BF00446302
10.1098/rstb.2006.1834
10.1080/08120099.2011.607849
10.1038/nature10511
10.1038/nature07381
10.1128/aem.55.1.261-263.1989
10.1073/pnas.1001973107
10.1146/annurev.micro.55.1.105
10.1093/molbev/msq232
10.1111/j.1529-8817.1968.tb04687.x
10.1046/j.1365-3091.2000.00284.x
10.1111/j.0022-3646.1992.00051.x
10.1099/00207713-45-4-676
10.1126/science.289.5485.1703
10.1073/pnas.0504878102
10.1073/pnas.0607540103
10.2307/3543338
10.1126/science.184.4141.1083
10.1007/BF00447293
10.1021/i560124a020
10.1073/pnas.0900885106
10.1007/BF00425214
10.4319/lo.1989.34.2.0474
10.1007/978-3-662-04036-2
10.1111/j.1574-6941.2007.00405.x
10.1126/science.11536492
10.1111/j.1472-4669.2012.00334.x
10.1126/science.1118439
10.1073/pnas.95.6.3054
10.1073/pnas.0807043105
10.2110/palo.2011.p11-088r
10.1007/s002030050760
10.4319/lo.1983.28.4.0749
10.1016/j.jtbi.2011.08.004
10.1111/j.1472-4669.2009.00227.x
10.1111/j.1365-3091.1977.tb00135.x
10.1038/nature09649
10.1139/e78-062
10.1007/BF00413007
10.1093/oxfordjournals.jbchem.a128660
10.1016/S0003-2670(00)82441-1
10.4319/lo.1981.26.4.0717
10.1111/j.1472-4669.2007.00114.x
10.1139/m96-023
10.1111/j.1574-6941.2010.00928.x
10.1007/BF00189945
10.1093/labmed/15.2.109
10.1016/j.palaeo.2005.04.026
10.4319/lo.1990.35.6.1343
10.1146/annurev-earth-040809-152356
10.1111/j.1574-6968.1991.tb04794.x
10.1007/s11120-010-9594-0
10.1038/nature02260
10.1111/j.1472-4669.2010.00235.x
10.1146/annurev-earth-042711-105327
10.1126/science.178.4059.402
10.1038/ismej.2011.28
10.1111/j.1574-6968.2002.tb11094.x
10.1007/BF00403198
ContentType Journal Article
Copyright Copyright MDPI AG 2012
Copyright_xml – notice: Copyright MDPI AG 2012
DBID AAYXX
CITATION
7TG
7TN
7UA
ABUWG
AFKRA
ATCPS
AZQEC
BENPR
BHPHI
BKSAR
C1K
CCPQU
DWQXO
F1W
GNUQQ
H96
HCIFZ
KL.
L.G
PATMY
PCBAR
PHGZM
PHGZT
PIMPY
PKEHL
PQEST
PQQKQ
PQUKI
PYCSY
DOA
DOI 10.3390/geosciences2040235
DatabaseName CrossRef
Meteorological & Geoastrophysical Abstracts
Oceanic Abstracts
Water Resources Abstracts
ProQuest Central (Alumni)
ProQuest Central UK/Ireland
ProQuest Agricultural & Environmental Science Collection
ProQuest Central Essentials
ProQuest Central
Natural Science Collection
Earth, Atmospheric & Aquatic Science Collection
Environmental Sciences and Pollution Management
ProQuest One Community College
ProQuest Central
ASFA: Aquatic Sciences and Fisheries Abstracts
ProQuest Central Student
Aquatic Science & Fisheries Abstracts (ASFA) 2: Ocean Technology, Policy & Non-Living Resources
ProQuest SciTech Premium Collection
Meteorological & Geoastrophysical Abstracts - Academic
Aquatic Science & Fisheries Abstracts (ASFA) Professional
Environmental Science Database
Earth, Atmospheric & Aquatic Science Database
ProQuest Central Premium
ProQuest One Academic
Publicly Available Content Database
ProQuest One Academic Middle East (New)
ProQuest One Academic Eastern Edition (DO NOT USE)
ProQuest One Academic
ProQuest One Academic UKI Edition
Environmental Science Collection
DOAJ Directory of Open Access Journals
DatabaseTitle CrossRef
Publicly Available Content Database
Aquatic Science & Fisheries Abstracts (ASFA) Professional
ProQuest Central Student
ProQuest One Academic Middle East (New)
ProQuest Central Essentials
ProQuest Central (Alumni Edition)
SciTech Premium Collection
ProQuest One Community College
Water Resources Abstracts
Environmental Sciences and Pollution Management
Earth, Atmospheric & Aquatic Science Collection
ProQuest Central
Meteorological & Geoastrophysical Abstracts
Oceanic Abstracts
Natural Science Collection
ProQuest Central Korea
Agricultural & Environmental Science Collection
ProQuest Central (New)
ProQuest One Academic Eastern Edition
Earth, Atmospheric & Aquatic Science Database
Environmental Science Collection
Aquatic Science & Fisheries Abstracts (ASFA) 2: Ocean Technology, Policy & Non-Living Resources
ProQuest One Academic UKI Edition
ASFA: Aquatic Sciences and Fisheries Abstracts
Environmental Science Database
ProQuest One Academic
Meteorological & Geoastrophysical Abstracts - Academic
ProQuest One Academic (New)
DatabaseTitleList CrossRef
Publicly Available Content Database

Database_xml – sequence: 1
  dbid: DOA
  name: DOAJ Directory of Open Access Journals
  url: https://www.doaj.org/
  sourceTypes: Open Website
– sequence: 2
  dbid: BENPR
  name: ProQuest Central
  url: https://www.proquest.com/central
  sourceTypes: Aggregation Database
DeliveryMethod fulltext_linktorsrc
Discipline Geology
EISSN 2076-3263
EndPage 259
ExternalDocumentID oai_doaj_org_article_6fe28f412691466bbc69653dab662089
3305328241
10_3390_geosciences2040235
GroupedDBID 5VS
7XC
8FE
8FH
AADQD
AAFWJ
AAHBH
AAYXX
ADBBV
AFKRA
AFPKN
AFZYC
ALMA_UNASSIGNED_HOLDINGS
ATCPS
BCNDV
BENPR
BHPHI
BKSAR
CCPQU
CITATION
GROUPED_DOAJ
HCIFZ
IPNFZ
KQ8
LK5
M7R
MODMG
M~E
OK1
PATMY
PCBAR
PHGZM
PHGZT
PIMPY
PROAC
PYCSY
RIG
ZBA
7TG
7TN
7UA
ABUWG
AZQEC
C1K
DWQXO
F1W
GNUQQ
H96
KL.
L.G
PKEHL
PQEST
PQQKQ
PQUKI
PUEGO
ID FETCH-LOGICAL-a408t-8c8227ee0c0490b5e1ec22650545a7fd64fc7aa9564408874bb320bde4143b4f3
IEDL.DBID BENPR
ISSN 2076-3263
IngestDate Wed Aug 27 01:25:21 EDT 2025
Mon Jun 30 11:12:54 EDT 2025
Tue Jul 01 03:50:44 EDT 2025
Thu Apr 24 22:57:31 EDT 2025
IsDoiOpenAccess true
IsOpenAccess true
IsPeerReviewed true
IsScholarly true
Issue 4
Language English
License https://creativecommons.org/licenses/by/3.0
LinkModel DirectLink
MergedId FETCHMERGED-LOGICAL-a408t-8c8227ee0c0490b5e1ec22650545a7fd64fc7aa9564408874bb320bde4143b4f3
Notes ObjectType-Article-1
SourceType-Scholarly Journals-1
ObjectType-Feature-2
content type line 14
OpenAccessLink https://www.proquest.com/docview/1524931705?pq-origsite=%requestingapplication%
PQID 1524931705
PQPubID 2032391
PageCount 25
ParticipantIDs doaj_primary_oai_doaj_org_article_6fe28f412691466bbc69653dab662089
proquest_journals_1524931705
crossref_citationtrail_10_3390_geosciences2040235
crossref_primary_10_3390_geosciences2040235
ProviderPackageCode CITATION
AAYXX
PublicationCentury 2000
PublicationDate 2012-12-01
PublicationDateYYYYMMDD 2012-12-01
PublicationDate_xml – month: 12
  year: 2012
  text: 2012-12-01
  day: 01
PublicationDecade 2010
PublicationPlace Basel
PublicationPlace_xml – name: Basel
PublicationTitle Geosciences (Basel)
PublicationYear 2012
Publisher MDPI AG
Publisher_xml – name: MDPI AG
References Verspagen (ref_36) 2011; 5
Eigenbrode (ref_7) 2006; 103
Rasmussen (ref_6) 2008; 455
DesMarais (ref_12) 2000; 289
Horodyski (ref_59) 1977; 47
Park (ref_60) 1977; 24
ref_10
Murphy (ref_20) 2008; 6
Ferris (ref_38) 1996; 42
Boone (ref_28) 2001; 1
Weller (ref_33) 1975; 104
Schopf (ref_22) 2006; 361
Bekker (ref_2) 2004; 427
Malin (ref_29) 1985; 131
Calkins (ref_72) 1943; 15
ref_15
Fukui (ref_57) 1999; 172
Waffenschmidt (ref_71) 1990; 3
Farquhar (ref_4) 2011; 107
Hofmann (ref_63) 1978; 15
ref_61
Wang (ref_9) 2011; 28
ref_24
ref_23
Castenholz (ref_27) 1991; 86
ref_21
Castenholz (ref_25) 1968; 4
Revsbech (ref_66) 1989; 34
Dicks (ref_49) 1986; 182
ref_62
Wall (ref_45) 1998; 95
Kaplan (ref_39) 1998; 76
Hanada (ref_54) 1995; 145
Hanada (ref_55) 2002; 208
Gerdes (ref_58) 2000; 47
Doemel (ref_52) 1977; 184
Gibson (ref_53) 1984; 138
McGregor (ref_37) 2007; 63
Villanueva (ref_48) 2010; 74
Maeda (ref_64) 1967; 62
Mata (ref_19) 2012; 27
Nelson (ref_50) 1983; 136
ref_34
ref_32
Revsbech (ref_69) 1981; 26
ref_31
Raymond (ref_1) 2006; 311
Bosak (ref_18) 2010; 8
Glud (ref_68) 1992; 28
Pierson (ref_51) 1974; 100
David (ref_8) 2011; 469
Petroff (ref_42) 2010; 107
Shepard (ref_44) 2010; 8
Eisenhut (ref_40) 2008; 105
Flannery (ref_13) 2012; 59
Tice (ref_14) 2011; 39
Konhauser (ref_3) 2011; 478
Kopp (ref_5) 2005; 102
Walter (ref_16) 1972; 27
Richardson (ref_26) 1989; 55
Petroff (ref_46) 2011; 289
DesMarais (ref_47) 1990; 35
Bosak (ref_17) 2009; 106
Riemann (ref_70) 1978; 30
Zevenboom (ref_35) 1980; 125
Nielsen (ref_30) 1985; 50
Schulz (ref_43) 2001; 55
Buick (ref_11) 1992; 255
Revsbech (ref_67) 1983; 28
Glud (ref_41) 1992; 28
Barbieri (ref_56) 2005; 227
Hageage (ref_65) 1984; 15
References_xml – volume: 50
  start-page: 373
  year: 1985
  ident: ref_30
  article-title: Oxygen responses and mat formation by Beggiatoa spp
  publication-title: Appl. Environ. Microbiol.
  doi: 10.1128/aem.50.2.373-382.1985
– volume: 100
  start-page: 5
  year: 1974
  ident: ref_51
  article-title: A phototrophic gliding filamentous bacterium of hot springs, Chloroflexus aurantiacus, gen. and sp. nov
  publication-title: Arch. Microbiol.
  doi: 10.1007/BF00446302
– volume: 361
  start-page: 869
  year: 2006
  ident: ref_22
  article-title: Fossil evidence of Archaean life
  publication-title: Philos. Trans. R. Soc. B
  doi: 10.1098/rstb.2006.1834
– volume: 131
  start-page: 2643
  year: 1985
  ident: ref_29
  article-title: Chemotaxis of a cyanobacterium on concentration gradient of carbon dioxide, bicarbonate, and oxygen
  publication-title: J. Gen. Microbiol.
– volume: 59
  start-page: 1
  year: 2012
  ident: ref_13
  article-title: Archean tufted microbial mats and the Great Oxidation Event: New insights into an ancient problem
  publication-title: Austral. J. Earth Sci.
  doi: 10.1080/08120099.2011.607849
– volume: 478
  start-page: 369
  year: 2011
  ident: ref_3
  article-title: Aerobic bacterial pyrite oxidation and acid rock drainage during the Great Oxidation Event
  publication-title: Nature
  doi: 10.1038/nature10511
– volume: 455
  start-page: 1101
  year: 2008
  ident: ref_6
  article-title: Reassessing the first appearance of eukaryotes and cyanobacteria
  publication-title: Nature
  doi: 10.1038/nature07381
– volume: 55
  start-page: 261
  year: 1989
  ident: ref_26
  article-title: Chemokinetic motility responses of the cyanobacterium Osillatoria terebriformis
  publication-title: Appl. Environ. Microbiol.
  doi: 10.1128/aem.55.1.261-263.1989
– volume: 107
  start-page: 9956
  year: 2010
  ident: ref_42
  article-title: Biophysical basis for the geometry of conical stromatolites
  publication-title: Proc. Natl. Acad. Sci. USA
  doi: 10.1073/pnas.1001973107
– volume: 55
  start-page: 105
  year: 2001
  ident: ref_43
  article-title: Big bacteria
  publication-title: Annu. Rev. Microbiol.
  doi: 10.1146/annurev.micro.55.1.105
– volume: 28
  start-page: 567
  year: 2011
  ident: ref_9
  article-title: A universal molecular clock of protein folds and its power in tracing the early history of aerobic metabolism and planet oxygenation
  publication-title: Mol. Biol. Evol.
  doi: 10.1093/molbev/msq232
– ident: ref_61
– volume: 4
  start-page: 132
  year: 1968
  ident: ref_25
  article-title: The behavior of Oscillatoria terebriformis in hot springs
  publication-title: J. Phycol.
  doi: 10.1111/j.1529-8817.1968.tb04687.x
– ident: ref_23
– volume: 47
  start-page: 279
  year: 2000
  ident: ref_58
  article-title: Microbial signatures in peritidal siliciclastic sediments: A catalogue
  publication-title: Sedimentology
  doi: 10.1046/j.1365-3091.2000.00284.x
– volume: 28
  start-page: 51
  year: 1992
  ident: ref_68
  article-title: Photosynthesis and photosynthesis-coupled respiration in natural biofilm quantified with oxygen microsensors
  publication-title: J. Phycol.
  doi: 10.1111/j.0022-3646.1992.00051.x
– volume: 145
  start-page: 676
  year: 1995
  ident: ref_54
  article-title: Chloroflexus aggregans sp. nov., a filamentous phototrophic bacterium which forms dense cell aggregates by active gliding movement
  publication-title: Int. J. Syst. Bacteriol.
  doi: 10.1099/00207713-45-4-676
– volume: 289
  start-page: 1703
  year: 2000
  ident: ref_12
  article-title: When did photosynthesis emerge on Earth?
  publication-title: Science
  doi: 10.1126/science.289.5485.1703
– volume: 102
  start-page: 11131
  year: 2005
  ident: ref_5
  article-title: The Paleoproterozoic snowball Earth: A climate disaster triggered by the evolution of oxygenic photosynthesis
  publication-title: Proc. Natl. Acad. Sci. USA
  doi: 10.1073/pnas.0504878102
– volume: 103
  start-page: 15759
  year: 2006
  ident: ref_7
  article-title: Late Archean rise of aerobic microbial ecosystems
  publication-title: Proc. Natl. Acad. Sci. USA
  doi: 10.1073/pnas.0607540103
– volume: 30
  start-page: 438
  year: 1978
  ident: ref_70
  article-title: Chlorophyll a determination: Improvements in methodology
  publication-title: OIKOS
  doi: 10.2307/3543338
– ident: ref_31
– volume: 184
  start-page: 1083
  year: 1977
  ident: ref_52
  article-title: Bacterial stromatolites: Origins of laminations
  publication-title: Science
  doi: 10.1126/science.184.4141.1083
– volume: 104
  start-page: 7
  year: 1975
  ident: ref_33
  article-title: Requirement of low oxidation-reduction potential for photosynthesis in a blue-green alga (Phormidium sp.)
  publication-title: Arch. Microbiol.
  doi: 10.1007/BF00447293
– volume: 15
  start-page: 762
  year: 1943
  ident: ref_72
  article-title: Microdetermination of glycolic and oxalic acids
  publication-title: Ind. Eng. Chem. Anal. Ed.
  doi: 10.1021/i560124a020
– volume: 106
  start-page: 10939
  year: 2009
  ident: ref_17
  article-title: Morphological record of oxygenic photosynthesis in conical stromatolites
  publication-title: Proc. Natl. Acad. Sci. USA
  doi: 10.1073/pnas.0900885106
– volume: 136
  start-page: 262
  year: 1983
  ident: ref_50
  article-title: Chemoautotrophic growth of a marine Beggiatoa in sulfide gradient cultures
  publication-title: Arch. Microbiol.
  doi: 10.1007/BF00425214
– volume: 34
  start-page: 474
  year: 1989
  ident: ref_66
  article-title: An oxygen microelectrode with a guard cathode
  publication-title: Limnol. Oceanogr.
  doi: 10.4319/lo.1989.34.2.0474
– ident: ref_32
  doi: 10.1007/978-3-662-04036-2
– ident: ref_62
– volume: 63
  start-page: 23
  year: 2007
  ident: ref_37
  article-title: Cyanobacterial composition of microbial mats from an Australian thermal spring: A polyphasic evaluation
  publication-title: FEMS Microbiol. Ecol.
  doi: 10.1111/j.1574-6941.2007.00405.x
– volume: 255
  start-page: 74
  year: 1992
  ident: ref_11
  article-title: The antiquity of oxygenic photosynthesis: Evidence from stromatolites in sulphate-deficient Archaean lakes
  publication-title: Science
  doi: 10.1126/science.11536492
– ident: ref_34
  doi: 10.1111/j.1472-4669.2012.00334.x
– volume: 311
  start-page: 1764
  year: 2006
  ident: ref_1
  article-title: The effect of oxygen on biochemical networks and the evolution of complex life
  publication-title: Science
  doi: 10.1126/science.1118439
– volume: 28
  start-page: 51
  year: 1992
  ident: ref_41
  article-title: Photosynthesis and photosynthesis-coupled respiration in natural biofilms quantified with oxygen microsensors
  publication-title: J. Phycol.
  doi: 10.1111/j.0022-3646.1992.00051.x
– volume: 95
  start-page: 3054
  year: 1998
  ident: ref_45
  article-title: Alignment enhances the cell-to-cell transfer of the pilus phenotype
  publication-title: Proc. Natl. Acad. Sci. USA
  doi: 10.1073/pnas.95.6.3054
– volume: 105
  start-page: 17199
  year: 2008
  ident: ref_40
  article-title: The photorespiratory glycolate metabolism is essential for cyanobacteria and might have been conveyed endosymbiontically to plants
  publication-title: Proc. Natl. Acad. Sci. USA
  doi: 10.1073/pnas.0807043105
– volume: 27
  start-page: 206
  year: 2012
  ident: ref_19
  article-title: Influence of gas production and filament orientation on stromatolite microfabric
  publication-title: Palaios
  doi: 10.2110/palo.2011.p11-088r
– volume: 172
  start-page: 193
  year: 1999
  ident: ref_57
  article-title: Physiology, phylogenetic relationships, and ecology of filamentous sulfate-reducing bacteria (genus Desulfonema)
  publication-title: Arch. Microbiol.
  doi: 10.1007/s002030050760
– volume: 28
  start-page: 749
  year: 1983
  ident: ref_67
  article-title: Photosynthesis of benthic microflora measured with high spatial resolution by the oxygen microprofile method: Capabilities and limitations of the method
  publication-title: Limnol. Oceanogr.
  doi: 10.4319/lo.1983.28.4.0749
– ident: ref_24
– volume: 289
  start-page: 90
  year: 2011
  ident: ref_46
  article-title: Reaction-diffusion model of nutrient uptake in a biofilm: Theory and experiment
  publication-title: J. Theor. Biol.
  doi: 10.1016/j.jtbi.2011.08.004
– volume: 8
  start-page: 45
  year: 2010
  ident: ref_18
  article-title: Formation and stability of oxygen-rich bubbles that shape photosynthetic mats
  publication-title: Geobiology
  doi: 10.1111/j.1472-4669.2009.00227.x
– ident: ref_21
  doi: 10.1007/978-3-662-04036-2
– volume: 24
  start-page: 485
  year: 1977
  ident: ref_60
  article-title: The preservation potential of some recent stromatolites
  publication-title: Sedimentology
  doi: 10.1111/j.1365-3091.1977.tb00135.x
– volume: 469
  start-page: 93
  year: 2011
  ident: ref_8
  article-title: Rapid evolutionary innovation during an Archean genetic expansion
  publication-title: Nature
  doi: 10.1038/nature09649
– volume: 15
  start-page: 571
  year: 1978
  ident: ref_63
  article-title: New stromatolites from the Aphebian Mistassini Group, Quebec
  publication-title: Can. J. Earth Sci.
  doi: 10.1139/e78-062
– volume: 138
  start-page: 96
  year: 1984
  ident: ref_53
  article-title: Chloroherpeton thalassium gen. nov. et spec. nov., a non-filamentous, flexing and gliding green sulfur bacterium
  publication-title: Arch. Microbiol.
  doi: 10.1007/BF00413007
– volume: 62
  start-page: 276
  year: 1967
  ident: ref_64
  article-title: Specificity of binding of hexopyranosyl polysaccharides with fluorescent brightener
  publication-title: J. Biochem.
  doi: 10.1093/oxfordjournals.jbchem.a128660
– volume: 76
  start-page: 917
  year: 1998
  ident: ref_39
  article-title: The inorganic carbon-concentrating mechanism in cyanobacteria: Induction and ecological significance
  publication-title: Can. J. Bot.
– volume: 182
  start-page: 103
  year: 1986
  ident: ref_49
  article-title: Mediated amperometric biosensor for D-galactose, glycolate, and L-amino acids based on ferrocene-modified carbon paste electrode
  publication-title: Anal. Chim. Acta
  doi: 10.1016/S0003-2670(00)82441-1
– volume: 26
  start-page: 717
  year: 1981
  ident: ref_69
  article-title: Primary production of microalgae in sediments measured by oxygen microprofile, H14CO3− fixation, and oxygen exchange methods
  publication-title: Limnol. Oceanogr.
  doi: 10.4319/lo.1981.26.4.0717
– volume: 1
  start-page: 473
  year: 2001
  ident: ref_28
  article-title: Cyanobacteria
  publication-title: Bergey’s Manual of Systematic Bacteriology
– volume: 6
  start-page: 83
  year: 2008
  ident: ref_20
  article-title: Tube structures of probable microbial origin in the Neoarchean Carrawine Dolomite, Hammersley Basin, Western Australia
  publication-title: Geobiology
  doi: 10.1111/j.1472-4669.2007.00114.x
– volume: 42
  start-page: 147
  year: 1996
  ident: ref_38
  article-title: Ultrastructure and seasonal growth patterns of microbial mats in a temperate climate saline-alkaline lake: Goodenough Lake, British Columbia, Canada
  publication-title: Can. J. Microbiol.
  doi: 10.1139/m96-023
– volume: 74
  start-page: 42
  year: 2010
  ident: ref_48
  article-title: Diversity and physiology of polyhydroxyalkanoate-producing and degrading strains in microbial mats
  publication-title: FEMS Microbiol. Ecol.
  doi: 10.1111/j.1574-6941.2010.00928.x
– volume: 3
  start-page: 1
  year: 1990
  ident: ref_71
  article-title: Characterization of a sperm lysine of Volvox carteri
  publication-title: Sex. Plant Rep.
  doi: 10.1007/BF00189945
– volume: 15
  start-page: 109
  year: 1984
  ident: ref_65
  article-title: Use of Calcofluor White in clinical mycology
  publication-title: Lab. Med.
  doi: 10.1093/labmed/15.2.109
– volume: 47
  start-page: 1305
  year: 1977
  ident: ref_59
  article-title: Lyngbya mats at Laguna Mormona, Baja California, Mexico; comparison with Proterozoic stromatolites
  publication-title: J. Sed. Res.
– volume: 227
  start-page: 143
  year: 2005
  ident: ref_56
  article-title: Microbial fabrics from Neogene cold seep carbonates, Northern Apennine, Italy
  publication-title: Palaeogeogr. Palaeoclim. Palaeoecol.
  doi: 10.1016/j.palaeo.2005.04.026
– ident: ref_15
– volume: 35
  start-page: 1343
  year: 1990
  ident: ref_47
  article-title: The diffusive boundary layer of sediments: Oxygen microgradients over a microbial mat
  publication-title: Limnol. Oceanogr.
  doi: 10.4319/lo.1990.35.6.1343
– volume: 39
  start-page: 297
  year: 2011
  ident: ref_14
  article-title: Early microbial communities
  publication-title: Annu. Rev. Earth Planet. Sci.
  doi: 10.1146/annurev-earth-040809-152356
– volume: 86
  start-page: 43
  year: 1991
  ident: ref_27
  article-title: Photosynthetic and behavioral versatility of the cyanobacterium Oscillatoria boryana in a sulfide-rich microbial mat
  publication-title: FEMS Microbiol. Ecol.
  doi: 10.1111/j.1574-6968.1991.tb04794.x
– volume: 107
  start-page: 11
  year: 2011
  ident: ref_4
  article-title: Gological constraints on the origin of oxygenic photosynthesis
  publication-title: Photosynth. Res.
  doi: 10.1007/s11120-010-9594-0
– volume: 427
  start-page: 117
  year: 2004
  ident: ref_2
  article-title: Dating the rise of atmospheric oxygen
  publication-title: Nature
  doi: 10.1038/nature02260
– volume: 8
  start-page: 179
  year: 2010
  ident: ref_44
  article-title: Undirected motility of cyanobacteria produces reticulate mats
  publication-title: Geobiology
  doi: 10.1111/j.1472-4669.2010.00235.x
– ident: ref_10
  doi: 10.1146/annurev-earth-042711-105327
– volume: 27
  start-page: 402
  year: 1972
  ident: ref_16
  article-title: Siliceous algal and bacterial stromatolites in hot spring and geyser effluents of Yellowstone national park
  publication-title: Science
  doi: 10.1126/science.178.4059.402
– volume: 5
  start-page: 1438
  year: 2011
  ident: ref_36
  article-title: Reversal in competitive dominance of a toxic versus non-toxic cyanobacterium in response to rising CO2
  publication-title: ISME J.
  doi: 10.1038/ismej.2011.28
– volume: 208
  start-page: 275
  year: 2002
  ident: ref_55
  article-title: Active and energy-dependent rapid formation of cell aggregates in the thermophilic photosynthetic bacterium Chloroflexus aggregans
  publication-title: FEMS Microbiol. Lett.
  doi: 10.1111/j.1574-6968.2002.tb11094.x
– volume: 125
  start-page: 59
  year: 1980
  ident: ref_35
  article-title: Effect of light on nitrate-limited Oscillatoria agardhii in chemostat cultures
  publication-title: Arch. Microbiol.
  doi: 10.1007/BF00403198
SSID ssj0000913834
Score 2.0501246
Snippet Some modern filamentous oxygenic photosynthetic bacteria (cyanobacteria) form macroscopic tufts, laminated cones and ridges that are very similar to some...
SourceID doaj
proquest
crossref
SourceType Open Website
Aggregation Database
Enrichment Source
Index Database
StartPage 235
SubjectTerms Archean
Carbon
cyanobacteria
Earth science
evolution
Inorganic carbon
morphogenesis
Oxygen
Particulate organic carbon
photosynthesis
Ridges
stromatolite
SummonAdditionalLinks – databaseName: DOAJ Directory of Open Access Journals
  dbid: DOA
  link: http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwrV1bS8MwFA4yEHwRrzidkgffJGxN06R91Om8wFTQwd5K0iZTkHasFdy_9yTp5mCgL7626YWTk5PvcE6-D6HzQLLEcMUJlTQnLDKGSCpsZ44wRgrACLE9Ozx85Hcj9jCOxitSX7YnzNMDe8N1udE0NiygPIFFzZXKeMKjMJeKc9qL3dE92PNWkikXg5MAUi9bUqaQqBPAKKE_MRNCjt-d6IYoUlcUnJg6rbefXcmR96_FZrfhDHbQdoMU8aX_w120oYs9tHnrlHjn-2j-9DWHySfXjYptjYcl2Kyc2OD1XuHSYK9zhvsQf6Y6x89vZV1W8wIgH7wSD2VdYVnk-H6lqRwDhsUwAFtGWi0L_FLPSgC1tktOY5-rHqDR4Oa1f0caHQUiwdQ1iTNAAULrXmbLfCrSgc4AdQH2YZEUJufMZEJKyJSs_HQsmFIh7alcMwBTipnwELWKstBHCKtQaQAFJkoiBfekZMYW1nSeSQGxIWmjYGHHNGtIxq3WxUcKyYa1fbpu-za6WD4z9RQbv46-stOzHGnpsd0FcJq0cZr0L6dpo85ictNmzVYpIBmWhJZe6Pg_vnGCtgBcUd_60kGtevapTwHA1OrM-eo3GAzuHg
  priority: 102
  providerName: Directory of Open Access Journals
Title Oxygen-Dependent Morphogenesis of Modern Clumped Photosynthetic Mats and Implications for the Archean Stromatolite Record
URI https://www.proquest.com/docview/1524931705
https://doaj.org/article/6fe28f412691466bbc69653dab662089
Volume 2
hasFullText 1
inHoldings 1
isFullTextHit
isPrint
link http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwfV1bS8MwFA46EXwRrzhv5ME3KdvSNG2fxKnzAtOhDnwrSZtMQZq5VnD_3nPabBMGvjZpKeckJ99JTr6PkLOO5LERSnhMsszjgTGeZCFW5oTGyBAwQoR3h_uP4m7IH96CN7fhVriyyllMrAJ1ZlPcI2_BOsNjH8lfLsZfHqpG4emqk9BYJWsQgiNIvta6N4-D5_kuC7JeRj6vb8v4kN-3RtqRROqCwQBmlc7bYkWqiPuX4nK12PS2yKZDifSydus2WdH5Dlm_rVR4p7tk-vQzBcd7107BtqR9C_ayIwxcHwW1htYaZ_QKYs9YZ3TwbktbTHOAe_BJ2pdlQWWe0fs_BeUU8CuFDhTZaLXM6Us5sQBosUJO0zpP3SPD3s3r1Z3nNBQ8CWYuvSgFBBBq3U7xiE8FuqNTQFyAe3ggQ5MJbtJQSsiSUHo6CrlSPmurTHMAUoobf580cpvrA0KVrzQAAhPEgYI2KbnBQzWdpTKEuBA3SWdmxyR1BOOoc_GZQKKBtk-Wbd8k5_N3xjW9xr-9u-ieeU-kxq4e2MkocTMtEUazyPAOEzGsAkKpVMQi8DOphGDtCH7zeObcxM3XIlmMrsP_m4_IBkAmVhe0HJNGOfnWJwBLSnXqxt5pldb_AnVr5v0
linkProvider ProQuest
linkToHtml http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwtV1Lb9QwEB6VrRBcEE9RKOADnFDUXdtxkgNCfbJLu0sFrdRbaif2goTiZZOq5E_1NzKTxxapUm-9xo4TecYz39jj-QDej7RMnDIq4JrngQydCzSPKDMnck5HiBFiujs8nanxqfx6Fp6twVV_F4bSKnub2Bjq3Ge0R76FfkYmgoq_fF78CYg1ik5XewqNVi0ObX2JIVv5abKH8v3A-cH-ye446FgFAo0froI4Q58YWTvM6NDLhHZkM8QgiARkqCOXK-mySGuMG4iMOY6kMYIPTW4lQgsjncBx78G6FBjKDGB9Z392_H21q0NVNmMh29s5QiTDrbntilLakuOC4Q2v3LUHbIgCbviBxrkdPIZHHSpl260aPYE1WzyF-18a1t_6GdTf_taoaMFex5hbsalH-fg5GcpfJfOOtZxqbBdt3cLm7Pinr3xZFwgvcUg21VXJdJGzyX8J7AzxMsMOjKrfWl2wH9XSI4CmjDzL2rj4OZzeyey-gEHhC_sSmBHGIgBxYRIabNNaOjrEs3mmI7RDyQaM-nlMs66gOfFq_E4xsKG5T2_O_QZ8XL2zaMt53Np7h8Sz6kmluJsHfjlPu5WdKmd57OSIqwS9jjImU4kKRa6NUnwY429u9sJNO_tQptfa_Or25nfwYHwyPUqPJrPD1_AQ4Rpvk2k2YVAtL-wbhESVedvpIYPzu1b9f6SOIeI
linkToPdf http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwtV3fb9MwELZGJxAviJ9iMMAP8ISipo5jJw8IbevKymipgEl7y-zELkgoLk2mkX9tfx13idMhTdrbXmPHsnznu-_s832EvB0pnlqhRcAUKwIeWxsoJjEzR1qrJGCEBN8Oz-bi6IR_Po1Pt8hl_xYG0yp7m9ga6sLleEY-BD_D0wiLvwytT4tYjCcfV38CZJDCm9aeTqNTkWPTXED4Vn2YjkHW7xibHP44OAo8w0CgYBJ1kOTgH6UxYY4XYDo2I5MDHgFUwGMlbSG4zaVSEEMgMXMiudYRC3VhOMAMzW0E494h2xKionBAtvcP54tvmxMerLiZRLx7qRNFaThcGl-g0lQMNg9rOeauvGFLGnDNJ7SObvKQPPAIle51KvWIbJnyMbn7qWUAbp6Q5uvfBpQuGHv23JrOHMjKLdFo_qqos7TjV6MHYPdWpqCLn652VVMC1IQh6UzVFVVlQaf_JbNTwM4UOlCshGtUSb_XawdgGrPzDO1i5Kfk5FZW9xkZlK40zwnVkTYARmycxhralOIWL_RMkSsJNindIaN-HbPcFzdHjo3fGQQ5uPbZ9bXfIe83_6y60h439t5H8Wx6Ylnu9oNbLzO_yzNhDUssHzGRggcSWuciFXFUKC0ECxOY5m4v3Mzbiiq70uwXNze_IfdA5bMv0_nxS3IfkBvr8mp2yaBen5tXgI5q_dqrISVnt635_wDNvCYX
openUrl ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=Oxygen-Dependent+Morphogenesis+of+Modern+Clumped+Photosynthetic+Mats+and+Implications+for+the+Archean+Stromatolite+Record&rft.jtitle=Geosciences+%28Basel%29&rft.au=Sim%2C+Min+Sub&rft.au=Liang%2C+Biqing&rft.au=Petroff%2C+Alexander+P&rft.au=Evans%2C+Alexander&rft.date=2012-12-01&rft.pub=MDPI+AG&rft.eissn=2076-3263&rft.volume=2&rft.issue=4&rft.spage=235&rft_id=info:doi/10.3390%2Fgeosciences2040235&rft.externalDBID=HAS_PDF_LINK&rft.externalDocID=3305328241
thumbnail_l http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/lc.gif&issn=2076-3263&client=summon
thumbnail_m http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/mc.gif&issn=2076-3263&client=summon
thumbnail_s http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/sc.gif&issn=2076-3263&client=summon