Genomics and Proteomics Provide New Insight into the Commensal and Pathogenic Lifestyles of Bovine- and Human-Associated Staphylococcus epidermidis Strains
The present study reports comparative genomics and proteomics of Staphylococcus epidermidis (SE) strains isolated from bovine intramammary infection (PM221) and human hosts (ATCC12228 and RP62A). Genome-level profiling and protein expression analyses revealed that the bovine strain and the mildly in...
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| Published in | Journal of proteome research Vol. 13; no. 8; pp. 3748 - 3762 |
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| Main Authors | , , , , , , , , , , , , , , , , , |
| Format | Journal Article |
| Language | English |
| Published |
United States
American Chemical Society
01.08.2014
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| Subjects | |
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| Abstract | The present study reports comparative genomics and proteomics of Staphylococcus epidermidis (SE) strains isolated from bovine intramammary infection (PM221) and human hosts (ATCC12228 and RP62A). Genome-level profiling and protein expression analyses revealed that the bovine strain and the mildly infectious ATCC12228 strain are highly similar. Their genomes share high sequence identity and synteny, and both were predicted to encode the commensal-associated fdr marker gene. In contrast, PM221 was judged to differ from the sepsis-associated virulent human RP62A strain on the basis of distinct protein expression patterns and overall lack of genome synteny. The 2D DIGE and phenotypic analyses suggest that PM221 and ATCC12228 coordinate the TCA cycle activity and the formation of small colony variants in a way that could result in increased viability. Pilot experimental infection studies indicated that although ATCC12228 was able to infect a bovine host, the PM221 strain caused more severe clinical signs. Further investigation revealed strain- and condition-specific differences among surface bound proteins with likely roles in adhesion, biofilm formation, and immunomodulatory functions. Thus, our findings revealed a close link between the bovine and commensal-type human strains and suggest that humans could act as a reservoir of bovine mastitis-causing SE strains. |
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| AbstractList | The present study reports comparative genomics and proteomics of Staphylococcus epidermidis (SE) strains isolated from bovine intramammary infection (PM221) and human hosts (ATCC12228 and RP62A). Genome-level profiling and protein expression analyses revealed that the bovine strain and the mildly infectious ATCC12228 strain are highly similar. Their genomes share high sequence identity and synteny, and both were predicted to encode the commensal-associated fdr marker gene. In contrast, PM221 was judged to differ from the sepsis-associated virulent human RP62A strain on the basis of distinct protein expression patterns and overall lack of genome synteny. The 2D DIGE and phenotypic analyses suggest that PM221 and ATCC12228 coordinate the TCA cycle activity and the formation of small colony variants in a way that could result in increased viability. Pilot experimental infection studies indicated that although ATCC12228 was able to infect a bovine host, the PM221 strain caused more severe clinical signs. Further investigation revealed strain- and condition-specific differences among surface bound proteins with likely roles in adhesion, biofilm formation, and immunomodulatory functions. Thus, our findings revealed a close link between the bovine and commensal-type human strains and suggest that humans could act as a reservoir of bovine mastitis-causing SE strains. |
| Author | Iivanainen, Antti Karonen, Taru Simojoki, Heli Auvinen, Petri Paulin, Lars Holm, Liisa Pyörälä, Satu Kalkkinen, Nisse Varmanen, Pekka Taponen, Suvi Siljamäki, Pia Kankainen, Matti Savijoki, Kirsi Laine, Pia K Koskinen, Patrik Nyman, Tuula A Sukura, Antti Salomäki, Tiina |
| AuthorAffiliation | Institute of Biotechnology, Proteomics Unit University of Helsinki CSC − IT Center for Science Ltd Institute of Biotechnology, DNA Sequencing and Genomics Laboratory Institute of Biotechnology, Bioinformatics Group Department of Food and Environmental Sciences Department of Veterinary Biosciences Department of Production Animal Medicine |
| AuthorAffiliation_xml | – name: Department of Production Animal Medicine – name: – name: Institute of Biotechnology, Bioinformatics Group – name: Department of Veterinary Biosciences – name: Department of Food and Environmental Sciences – name: Institute of Biotechnology, DNA Sequencing and Genomics Laboratory – name: Institute of Biotechnology, Proteomics Unit – name: CSC − IT Center for Science Ltd – name: University of Helsinki |
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| BackLink | https://www.ncbi.nlm.nih.gov/pubmed/25014494$$D View this record in MEDLINE/PubMed |
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| Keywords | intramammary infection Staphylococcus epidermidis virulence 2D DIGE Genomics adaptation surfacome shaving |
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| Title | Genomics and Proteomics Provide New Insight into the Commensal and Pathogenic Lifestyles of Bovine- and Human-Associated Staphylococcus epidermidis Strains |
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