Solid-State NMR of a Protein in a Precipitated Complex with a Full-Length Antibody
NMR spectroscopy is a prime technique for characterizing atomic-resolution structures and dynamics of biomolecular complexes but for such systems faces challenges of sensitivity and spectral resolution. We demonstrate that the application of 1H-detected experiments at magic-angle spinning frequencie...
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Published in | Journal of the American Chemical Society Vol. 136; no. 48; pp. 16800 - 16806 |
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Main Authors | , , , , , , , , , , |
Format | Journal Article |
Language | English |
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United States
American Chemical Society
03.12.2014
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Abstract | NMR spectroscopy is a prime technique for characterizing atomic-resolution structures and dynamics of biomolecular complexes but for such systems faces challenges of sensitivity and spectral resolution. We demonstrate that the application of 1H-detected experiments at magic-angle spinning frequencies of >50 kHz enables the recording, in a matter of minutes to hours, of solid-state NMR spectra suitable for quantitative analysis of protein complexes present in quantities as small as a few nanomoles (tens of micrograms for the observed component). This approach enables direct structure determination and quantitative dynamics measurements in domains of protein complexes with masses of hundreds of kilodaltons. Protein–protein interaction interfaces can be mapped out by comparison of the chemical shifts of proteins within solid-state complexes with those of the same constituent proteins free in solution. We employed this methodology to characterize a >300 kDa complex of GB1 with full-length human immunoglobulin, where we found that sample preparation by simple precipitation yields spectra of exceptional quality, a feature that is likely to be shared with some other precipitating complexes. Finally, we investigated extensions of our methodology to spinning frequencies of up to 100 kHz. |
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AbstractList | NMR spectroscopy is a prime technique for characterizing atomic-resolution structures and dynamics of biomolecular complexes but for such systems faces challenges of sensitivity and spectral resolution. We demonstrate that the application of (1)H-detected experiments at magic-angle spinning frequencies of >50 kHz enables the recording, in a matter of minutes to hours, of solid-state NMR spectra suitable for quantitative analysis of protein complexes present in quantities as small as a few nanomoles (tens of micrograms for the observed component). This approach enables direct structure determination and quantitative dynamics measurements in domains of protein complexes with masses of hundreds of kilodaltons. Protein-protein interaction interfaces can be mapped out by comparison of the chemical shifts of proteins within solid-state complexes with those of the same constituent proteins free in solution. We employed this methodology to characterize a >300 kDa complex of GB1 with full-length human immunoglobulin, where we found that sample preparation by simple precipitation yields spectra of exceptional quality, a feature that is likely to be shared with some other precipitating complexes. Finally, we investigated extensions of our methodology to spinning frequencies of up to 100 kHz. NMR spectroscopy is a prime technique for characterizing atomic-resolution structures and dynamics of biomolecular complexes but for such systems faces challenges of sensitivity and spectral resolution. We demonstrate that the application of 1H-detected experiments at magic-angle spinning frequencies of >50 kHz enables the recording, in a matter of minutes to hours, of solid-state NMR spectra suitable for quantitative analysis of protein complexes present in quantities as small as a few nanomoles (tens of micrograms for the observed component). This approach enables direct structure determination and quantitative dynamics measurements in domains of protein complexes with masses of hundreds of kilodaltons. Protein–protein interaction interfaces can be mapped out by comparison of the chemical shifts of proteins within solid-state complexes with those of the same constituent proteins free in solution. We employed this methodology to characterize a >300 kDa complex of GB1 with full-length human immunoglobulin, where we found that sample preparation by simple precipitation yields spectra of exceptional quality, a feature that is likely to be shared with some other precipitating complexes. Finally, we investigated extensions of our methodology to spinning frequencies of up to 100 kHz. NMR spectroscopy is a prime technique for characterizing atomic-resolution structures and dynamics of biomolecular complexes but for such systems faces challenges of sensitivity and spectral resolution. We demonstrate that the application of (1)H-detected experiments at magic-angle spinning frequencies of >50 kHz enables the recording, in a matter of minutes to hours, of solid-state NMR spectra suitable for quantitative analysis of protein complexes present in quantities as small as a few nanomoles (tens of micrograms for the observed component). This approach enables direct structure determination and quantitative dynamics measurements in domains of protein complexes with masses of hundreds of kilodaltons. Protein-protein interaction interfaces can be mapped out by comparison of the chemical shifts of proteins within solid-state complexes with those of the same constituent proteins free in solution. We employed this methodology to characterize a >300 kDa complex of GB1 with full-length human immunoglobulin, where we found that sample preparation by simple precipitation yields spectra of exceptional quality, a feature that is likely to be shared with some other precipitating complexes. Finally, we investigated extensions of our methodology to spinning frequencies of up to 100 kHz. |
Author | Iuga, Dinu Lamley, Jonathan M Lewandowski, Józef R Sass, Hans-Juergen Öster, Carl Grzesiek, Stephan Reinhold, Andres Rogowski, Marco Past, Jaan Oss, Andres Samoson, Ago |
AuthorAffiliation | Department of Chemistry University of Basel Biozentrum NMR Institute and Tehnomeedikum Tallinn University of Technology University of Warwick Department of Physics |
AuthorAffiliation_xml | – name: Department of Chemistry – name: University of Warwick – name: Tallinn University of Technology – name: NMR Institute and Tehnomeedikum – name: Biozentrum – name: Department of Physics – name: University of Basel |
Author_xml | – sequence: 1 givenname: Jonathan M surname: Lamley fullname: Lamley, Jonathan M – sequence: 2 givenname: Dinu surname: Iuga fullname: Iuga, Dinu – sequence: 3 givenname: Carl surname: Öster fullname: Öster, Carl – sequence: 4 givenname: Hans-Juergen surname: Sass fullname: Sass, Hans-Juergen – sequence: 5 givenname: Marco surname: Rogowski fullname: Rogowski, Marco – sequence: 6 givenname: Andres surname: Oss fullname: Oss, Andres – sequence: 7 givenname: Jaan surname: Past fullname: Past, Jaan – sequence: 8 givenname: Andres surname: Reinhold fullname: Reinhold, Andres – sequence: 9 givenname: Stephan surname: Grzesiek fullname: Grzesiek, Stephan email: stephan.grzesiek@unibas.ch – sequence: 10 givenname: Ago surname: Samoson fullname: Samoson, Ago email: ago.samoson@gmail.com – sequence: 11 givenname: Józef R surname: Lewandowski fullname: Lewandowski, Józef R email: j.r.lewandowski@warwick.ac.uk |
BackLink | https://www.ncbi.nlm.nih.gov/pubmed/25381931$$D View this record in MEDLINE/PubMed |
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Snippet | NMR spectroscopy is a prime technique for characterizing atomic-resolution structures and dynamics of biomolecular complexes but for such systems faces... |
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SubjectTerms | Antigen-Antibody Complex - chemistry Antigen-Antibody Complex - immunology Chemical Precipitation Humans Immunoglobulins - chemistry Immunoglobulins - immunology Models, Molecular Nuclear Magnetic Resonance, Biomolecular Proteins - chemistry Proteins - immunology |
Title | Solid-State NMR of a Protein in a Precipitated Complex with a Full-Length Antibody |
URI | http://dx.doi.org/10.1021/ja5069992 https://www.ncbi.nlm.nih.gov/pubmed/25381931 https://search.proquest.com/docview/1629953726 |
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