Fragmentation patterns and personalized sequencing of cell‐free DNA in urine and plasma of glioma patients
Mouliere, Florent, Smith, Christopher G, Heider, Katrin, Su, Jing, Pol, Ymke, Thompson, Mareike, Morris, James, Wan, Jonathan C M, Chandrananda, Dineika, Hadfield, James, Grzelak, Marta, Hudecova, Irena, Couturier, Dominique‐Laurent, Cooper, Wendy, Zhao, Hui, Gale, Davina, Eldridge, Matthew, Watts, Colin, Brindle, Kevin, Rosenfeld, Nitzan, Mair, Richard
Published in EMBO molecular medicine (09.08.2021)
Published in EMBO molecular medicine (09.08.2021)
Get full text
Journal Article
Genome‐wide and panel‐based cell‐free DNA characterization of patients with resectable esophageal adenocarcinoma
van den Ende, Tom, van der Pol, Ymke, Creemers, Aafke, Moldovan, Norbert, Boers, Dries, van Berge Henegouwen, Mark I, Hulshof, Maarten CCM, Cillessen, Saskia AGM, van Grieken, Nicole CT, Pegtel, D Michiel, Derks, Sarah, Bijlsma, Maarten F, Mouliere, Florent, van Laarhoven, Hanneke WM
Published in The Journal of pathology (01.11.2023)
Published in The Journal of pathology (01.11.2023)
Get full text
Journal Article
Real‐time analysis of the cancer genome and fragmentome from plasma and urine cell‐free DNA using nanopore sequencing
Pol, Ymke, Tantyo, Normastuti Adhini, Evander, Nils, Hentschel, Anouk E, Wever, Birgit MM, Ramaker, Jip, Bootsma, Sanne, Fransen, Marieke F, Lenos, Kristiaan J, Vermeulen, Louis, Schneiders, Famke L, Bahce, Idris, Nieuwenhuijzen, Jakko A, Steenbergen, Renske DM, Pegtel, D Michiel, Moldovan, Norbert, Mouliere, Florent
Published in EMBO molecular medicine (07.12.2023)
Published in EMBO molecular medicine (07.12.2023)
Get full text
Journal Article
Multi-modal cell-free DNA genomic and fragmentomic patterns enhance cancer survival and recurrence analysis
Moldovan, Norbert, van der Pol, Ymke, van den Ende, Tom, Boers, Dries, Verkuijlen, Sandra, Creemers, Aafke, Ramaker, Jip, Vu, Trang, Bootsma, Sanne, Lenos, Kristiaan J, Vermeulen, Louis, Fransen, Marieke F, Pegtel, Michiel, Bahce, Idris, van Laarhoven, Hanneke, Mouliere, Florent
Published in Cell reports. Medicine (16.01.2024)
Published in Cell reports. Medicine (16.01.2024)
Get full text
Journal Article
Comparison of cell-free and small extracellular-vesicle-associated DNA by sequencing plasma of lung cancer patients
Moldovan, Norbert, Verkuijlen, Sandra, van der Pol, Ymke, Bosch, Leontien, van Weering, Jan R.T., Bahce, Idris, Pegtel, D. Michiel, Mouliere, Florent
Published in iScience (20.09.2024)
Published in iScience (20.09.2024)
Get full text
Journal Article
Molecular analysis for ovarian cancer detection in patient-friendly samples
Wever, Birgit M M, Schaafsma, Mirte, Bleeker, Maaike C G, van den Burgt, Yara, van den Helder, Rianne, Lok, Christianne A R, Dijk, Frederike, van der Pol, Ymke, Mouliere, Florent, Moldovan, Norbert, van Trommel, Nienke E, Steenbergen, Renske D M
Published in Communications medicine (16.05.2024)
Published in Communications medicine (16.05.2024)
Get full text
Journal Article
The Effect of Preanalytical and Physiological Variables on Cell-Free DNA Fragmentation
van der Pol, Ymke, Moldovan, Norbert, Verkuijlen, Sandra, Ramaker, Jip, Boers, Dries, Onstenk, Wendy, de Rooij, Johan, Bahce, Idris, Pegtel, D Michiel, Mouliere, Florent
Published in Clinical chemistry (Baltimore, Md.) (01.06.2022)
Published in Clinical chemistry (Baltimore, Md.) (01.06.2022)
Get full text
Journal Article
Impact of KRAS codon-specific mutations on survival of patients with metastatic CRC (mCRC) treated with trifluridine-tipiracil (TAS) plus bevacizumab (Bev): A real-world analysis
Maddalena, Giulia, van der Pol, Ymke, Rivers, Zachary, Dasari, Arvind, Rogers, Jane E., Guinney, Justin, Kopetz, Scott, Raghav, Kanwal Pratap Singh
Published in Journal of clinical oncology (20.01.2024)
Published in Journal of clinical oncology (20.01.2024)
Get full text
Journal Article
Outcome prediction in resectable esophageal adenocarcinoma based on clinical variables, radiomics, and ctDNA
van den Ende, Tom, Kuijper, Steven C., Widaatalla, Yousif, Noortman, Wyanne A., van Velden, Floris H.P., Woodruff, Henry C., van der Pol, Ymke, Moldovan, Norbert, Pegtel, D. Michiel, Derks, Sarah, Bijlsma, Maarten F., Moulière, Florent, de Geus-Oei, Lioe-Fee, Lambin, Philippe, Van Laarhoven, Hanneke W.M.
Published in Journal of clinical oncology (01.02.2023)
Published in Journal of clinical oncology (01.02.2023)
Get full text
Journal Article
Abstract 5056: Molecular characterization of microsatellite stable (MSS) colorectal cancer (CRC) patients with a BRAF V600E mutation
van der Pol, Ymke, Yilma, Binyam, Morris, Van K., Chao, Calvin, Harris, Michelle, Guinney, Justin, Kopetz, Scott
Published in Cancer research (Chicago, Ill.) (22.03.2024)
Published in Cancer research (Chicago, Ill.) (22.03.2024)
Get full text
Journal Article
Circulating tumor DNA (ctDNA) analysis by low-coverage whole genome sequencing (lcWGS) of resectable esophageal adenocarcinoma (rEAC) patients
van den Ende, Tom, Creemers, Aafke, van der Pol, Ymke, Boers, Dries, Van Berge Henegouwen, Mark I., Gisbertz, Suzanne S., Geijsen, E. Debby, Hulshof, Maarten C.C.M., Dijk, Frederike, van Grieken, Nicole C.T., Pegtel, D. Michiel, Derks, Sarah, Bijlsma, Maarten F., Moulière, Florent, Van Laarhoven, Hanneke W.M.
Published in Journal of clinical oncology (20.05.2021)
Published in Journal of clinical oncology (20.05.2021)
Get full text
Journal Article
The effect of pre-analytical and physiological variables on cell-free DNA fragmentation
Ymke Van Der Pol, Moldovan, Norbert, Verkuijlen, Sandra, Ramaker, Jip, Boers, Dries, Onstenk, Wendy, De Rooij, Johan, Bahce, Idris, Pegtel, D Michiel, Mouliere, Florent
Published in bioRxiv (18.09.2021)
Published in bioRxiv (18.09.2021)
Get full text
Paper