GWAS for quantitative resistance phenotypes in Mycobacterium tuberculosis reveals resistance genes and regulatory regions
Farhat, Maha R., Freschi, Luca, Calderon, Roger, Ioerger, Thomas, Snyder, Matthew, Meehan, Conor J., de Jong, Bouke, Rigouts, Leen, Sloutsky, Alex, Kaur, Devinder, Sunyaev, Shamil, van Soolingen, Dick, Shendure, Jay, Sacchettini, Jim, Murray, Megan
Published in Nature communications (13.05.2019)
Published in Nature communications (13.05.2019)
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Epidemiological links between tuberculosis cases identified twice as efficiently by whole genome sequencing than conventional molecular typing: A population-based study
Jajou, Rana, de Neeling, Albert, van Hunen, Rianne, de Vries, Gerard, Schimmel, Henrieke, Mulder, Arnout, Anthony, Richard, van der Hoek, Wim, van Soolingen, Dick
Published in PloS one (04.04.2018)
Published in PloS one (04.04.2018)
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Challenging the gold standard: the limitations of molecular assays for detection of Mycobacterium tuberculosis heteroresistance
Danchuk, Sarah N, Solomon, Ori E, Kohl, Thomas Andreas, Dreyer, Viola, Barilar, Ivan, Utpatel, Christian, Niemann, Stefan, Soolingen, Dick van, Anthony, Richard, van Ingen, Jakko, Michael, Joy S, Behr, Marcel A
Published in Thorax (29.01.2024)
Published in Thorax (29.01.2024)
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Proposal for Standardization of Optimized Mycobacterial Interspersed Repetitive Unit-Variable-Number Tandem Repeat Typing of Mycobacterium tuberculosis
Supply, Philip, Allix, Caroline, Lesjean, Sarah, Cardoso-Oelemann, Mara, Rüsch-Gerdes, Sabine, Willery, Eve, Savine, Evgueni, Haas, Petra de, Deutekom, Henk van, Roring, Solvig, Bifani, Pablo, Kurepina, Natalia, Kreiswirth, Barry, Sola, Christophe, Rastogi, Nalin, Vatin, Vincent, Gutierrez, Maria Cristina, Fauville, Maryse, Niemann, Stefan, Skuce, Robin, Kremer, Kristin, Locht, Camille, Soolingen, Dick van
Published in Journal of Clinical Microbiology (01.12.2006)
Published in Journal of Clinical Microbiology (01.12.2006)
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Failure of the Amikacin, Cefoxitin, and Clarithromycin Combination Regimen for Treating Pulmonary Mycobacterium abscessus Infection
Ferro, Beatriz E, Srivastava, Shashikant, Deshpande, Devyani, Pasipanodya, Jotam G, van Soolingen, Dick, Mouton, Johan W, van Ingen, Jakko, Gumbo, Tawanda
Published in Antimicrobial agents and chemotherapy (01.10.2016)
Published in Antimicrobial agents and chemotherapy (01.10.2016)
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Epidemiology of antituberculosis drug resistance 2002–07: an updated analysis of the Global Project on Anti-Tuberculosis Drug Resistance Surveillance
Wright, Abigail, Dr, Zignol, Matteo, MD, Van Deun, Armand, MD, Falzon, Dennis, MD, Gerdes, Sabine Ruesch, PhD, Feldman, Knut, Prof, Hoffner, Sven, PhD, Drobniewski, Francis, Prof, Barrera, Lucia, MD, van Soolingen, Dick, PhD, Boulabhal, Fadila, Prof, Paramasivan, CN, PhD, Kam, Kai Man, MD, Mitarai, Satoshi, MD, Nunn, Paul, MD, Raviglione, Mario, MD
Published in The Lancet (British edition) (30.05.2009)
Published in The Lancet (British edition) (30.05.2009)
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Current status and opportunities for therapeutic drug monitoring in the treatment of tuberculosis
Zuur, Marlanka A., Bolhuis, Mathieu S., Anthony, Richard, den Hertog, Alice, van der Laan, Tridia, Wilffert, Bob, de Lange, Wiel, van Soolingen, Dick, Alffenaar, Jan-Willem C.
Published in Expert opinion on drug metabolism & toxicology (03.05.2016)
Published in Expert opinion on drug metabolism & toxicology (03.05.2016)
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Interactions between helminths and tuberculosis infections: Implications for tuberculosis diagnosis and vaccination in Africa
Cadmus, Simeon I, Akinseye, Victor O, Taiwo, Babafemi O, Pinelli, Elena O, van Soolingen, Dick, Rhodes, Shelley G
Published in PLoS neglected tropical diseases (01.06.2020)
Published in PLoS neglected tropical diseases (01.06.2020)
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Antibiotic resistance prediction for Mycobacterium tuberculosis from genome sequence data with Mykrobe
Hunt, Martin, Bradley, Phelim, Lapierre, Simon Grandjean, Heys, Simon, Thomsit, Mark, Hall, Michael B, Malone, Kerri M, Wintringer, Penelope, Walker, Timothy M, Cirillo, Daniela M, Comas, Iñaki, Farhat, Maha R, Fowler, Phillip, Gardy, Jennifer, Ismail, Nazir, Kohl, Thomas A, Mathys, Vanessa, Merker, Matthias, Niemann, Stefan, Omar, Shaheed Vally, Sintchenko, Vitali, Smith, Grace, van Soolingen, Dick, Supply, Philip, Tahseen, Sabira, Wilcox, Mark, Arandjelovic, Irena, Peto, Tim E A, Crook, Derrick W, Iqbal, Zamin
Published in Wellcome open research (2019)
Published in Wellcome open research (2019)
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Epidemiology of Isoniazid Resistance Mutations and Their Effect on Tuberculosis Treatment Outcomes
HUYEN, Mai N. T, COBELENS, Frank G. J, BUU, Tran N, LAN, Nguyen T. N, DUNG, Nguyen H, KREMER, Kristin, TIEMERSMA, Edine W, VAN SOOLINGEN, Dick
Published in Antimicrobial Agents and Chemotherapy (01.08.2013)
Published in Antimicrobial Agents and Chemotherapy (01.08.2013)
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Low Induction of Proinflammatory Cytokines Parallels Evolutionary Success of Modern Strains within the Mycobacterium tuberculosis Beijing Genotype
van Laarhoven, Arjan, Mandemakers, Jornt J, Kleinnijenhuis, Johanneke, Enaimi, Mimount, Lachmandas, Ekta, Joosten, Leo A B, Ottenhoff, Tom H M, Netea, Mihai G, van Soolingen, Dick, van Crevel, Reinout
Published in Infection and Immunity (01.10.2013)
Published in Infection and Immunity (01.10.2013)
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High-Resolution Typing by Integration of Genome Sequencing Data in a Large Tuberculosis Cluster
Schürch, Anita C, Kremer, Kristin, Daviena, Olaf, Kiers, Albert, Boeree, Martin J, Siezen, Roland J, van Soolingen, Dick
Published in Journal of Clinical Microbiology (01.09.2010)
Published in Journal of Clinical Microbiology (01.09.2010)
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Comparative Study on Genotypic and Phenotypic Second-Line Drug Resistance Testing of Mycobacterium tuberculosis Complex Isolates
van Ingen, Jakko, Simons, Sami, de Zwaan, Rina, van der Laan, Tridia, Kamst-van Agterveld, Miranda, Boeree, Martin J, van Soolingen, Dick
Published in Journal of Clinical Microbiology (01.08.2010)
Published in Journal of Clinical Microbiology (01.08.2010)
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SeekTB, a Two-Stage Multiplex Real-Time-PCR-Based Method for Differentiation of the Mycobacterium tuberculosis Complex
REDDINGTON, Kate, ZUMLA, Alimuddin, BATES, Matthew, SOOLINGEN, Dick Van, NIEMANN, Stefan, BARRY, Thomas, O'GRADY, Justin
Published in Journal of Clinical Microbiology (01.07.2012)
Published in Journal of Clinical Microbiology (01.07.2012)
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