Exchange pathways of plastoquinone and plastoquinol in the photosystem II complex
Van Eerden, Floris J, Melo, Manuel N, Frederix, Pim W J M, Periole, Xavier, Marrink, Siewert J
Published in Nature communications (10.05.2017)
Published in Nature communications (10.05.2017)
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Flexible, Functional, and Familiar: Characteristics of SARS-CoV-2 Spike Protein Evolution
Saputri, Dianita S., Li, Songling, van Eerden, Floris J., Rozewicki, John, Xu, Zichang, Ismanto, Hendra S., Davila, Ana, Teraguchi, Shunsuke, Katoh, Kazutaka, Standley, Daron M.
Published in Frontiers in microbiology (17.09.2020)
Published in Frontiers in microbiology (17.09.2020)
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Enhancement of SARS-CoV-2 Infection via Crosslinking of Adjacent Spike Proteins by N-Terminal Domain-Targeting Antibodies
Lusiany, Tina, Terada, Tohru, Kishikawa, Jun-Ichi, Hirose, Mika, Chen, David Virya, Sugihara, Fuminori, Ismanto, Hendra Saputra, van Eerden, Floris J, Li, Songling, Kato, Takayuki, Arase, Hisashi, Yoshiharu, Matsuura, Okada, Masato, Standley, Daron M
Published in Viruses (01.12.2023)
Published in Viruses (01.12.2023)
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Celastrol suppresses humoral immune responses and autoimmunity by targeting the COMMD3/8 complex
Shirai, Taiichiro, Nakai, Akiko, Ando, Emiko, Fujimoto, Jun, Leach, Sarah, Arimori, Takao, Higo, Daisuke, van Eerden, Floris J, Tulyeu, Janyerkye, Liu, Yu-Chen, Okuzaki, Daisuke, Murayama, Masanori A, Miyata, Haruhiko, Nunomura, Kazuto, Lin, Bangzhong, Tani, Akiyoshi, Kumanogoh, Atsushi, Ikawa, Masahito, Wing, James B, Standley, Daron M, Takagi, Junichi, Suzuki, Kazuhiro
Published in Science immunology (31.03.2023)
Published in Science immunology (31.03.2023)
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Methods for sequence and structural analysis of B and T cell receptor repertoires
Teraguchi, Shunsuke, Saputri, Dianita S., Llamas-Covarrubias, Mara Anais, Davila, Ana, Diez, Diego, Nazlica, Sedat Aybars, Rozewicki, John, Ismanto, Hendra S., Wilamowski, Jan, Xie, Jiaqi, Xu, Zichang, Loza-Lopez, Martin de Jesus, van Eerden, Floris J., Li, Songling, Standley, Daron M.
Published in Computational and structural biotechnology journal (01.01.2020)
Published in Computational and structural biotechnology journal (01.01.2020)
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Lipid Organization of the Plasma Membrane
Ingólfsson, Helgi I, Melo, Manuel N, van Eerden, Floris J, Arnarez, Clément, Lopez, Cesar A, Wassenaar, Tsjerk A, Periole, Xavier, de Vries, Alex H, Tieleman, D. Peter, Marrink, Siewert J
Published in Journal of the American Chemical Society (15.10.2014)
Published in Journal of the American Chemical Society (15.10.2014)
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Characterization of thylakoid lipid membranes from cyanobacteria and higher plants by molecular dynamics simulations
van Eerden, Floris J., de Jong, Djurre H., de Vries, Alex H., Wassenaar, Tsjerk A., Marrink, Siewert J.
Published in Biochimica et biophysica acta (01.06.2015)
Published in Biochimica et biophysica acta (01.06.2015)
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Martini Force Field Parameters for Glycolipids
López, César A, Sovova, Zofie, van Eerden, Floris J, de Vries, Alex H, Marrink, Siewert J
Published in Journal of chemical theory and computation (12.03.2013)
Published in Journal of chemical theory and computation (12.03.2013)
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Prediction of Thylakoid Lipid Binding Sites on Photosystem II
Van Eerden, Floris J., Melo, Manuel N., Frederix, Pim W.J.M., Marrink, Siewert J.
Published in Biophysical journal (19.12.2017)
Published in Biophysical journal (19.12.2017)
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Structural Modeling of Lymphocyte Receptors and Their Antigens
Li, Songling, Wilamowski, Jan, Teraguchi, Shunsuke, van Eerden, Floris J, Rozewicki, John, Davila, Ana, Xu, Zichang, Katoh, Kazutaka, Standley, Daron M
Published in Methods in molecular biology (Clifton, N.J.) (01.01.2019)
Published in Methods in molecular biology (Clifton, N.J.) (01.01.2019)
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Understanding Conformational Dynamics of Complex Lipid Mixtures Relevant to Biology
Friedman, Ran, Khalid, Syma, Aponte-Santamaría, Camilo, Arutyunova, Elena, Becker, Marlon, Boyd, Kevin J., Christensen, Mikkel, Coimbra, João T. S., Concilio, Simona, Daday, Csaba, van Eerden, Floris J., Fernandes, Pedro A., Gräter, Frauke, Hakobyan, Davit, Heuer, Andreas, Karathanou, Konstantina, Keller, Fabian, Lemieux, M. Joanne, Marrink, Siewert J., May, Eric R., Mazumdar, Antara, Naftalin, Richard, Pickholz, Mónica, Piotto, Stefano, Pohl, Peter, Quinn, Peter, Ramos, Maria J., Schiøtt, Birgit, Sengupta, Durba, Sessa, Lucia, Vanni, Stefano, Zeppelin, Talia, Zoni, Valeria, Bondar, Ana-Nicoleta, Domene, Carmen
Published in The Journal of membrane biology (01.12.2018)
Published in The Journal of membrane biology (01.12.2018)
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Simulation of Photosystem Ii Dynamics in the Thylakoid Membrane
van Eerden, Floris J., de Jong, Djurre H., Periole, Xavier, Marrink, Siewert-Jan
Published in Biophysical journal (28.01.2014)
Published in Biophysical journal (28.01.2014)
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