Transcription Factor GATA4 Regulates Cell Type-Specific Splicing Through Direct Interaction With RNA in Human Induced Pluripotent Stem Cell-Derived Cardiac Progenitors
Zhu, Lili, Choudhary, Krishna, Gonzalez-Teran, Barbara, Ang, Yen-Sin, Thomas, Reuben, Stone, Nicole R, Liu, Lei, Zhou, Ping, Zhu, Chenchen, Ruan, Hongmei, Huang, Yu, Jin, Shibo, Pelonero, Angelo, Koback, Frances, Padmanabhan, Arun, Sadagopan, Nandhini, Hsu, Austin, Costa, Mauro W, Gifford, Casey A, van Bemmel, Joke G, Hüttenhain, Ruth, Vedantham, Vasanth, Conklin, Bruce R, Black, Brian L, Bruneau, Benoit G, Steinmetz, Lars, Krogan, Nevan J, Pollard, Katherine S, Srivastava, Deepak
Published in Circulation (New York, N.Y.) (06.09.2022)
Published in Circulation (New York, N.Y.) (06.09.2022)
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The insulator protein SU(HW) fine-tunes nuclear lamina interactions of the Drosophila genome
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Published in PloS one (24.11.2010)
Published in PloS one (24.11.2010)
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Systematic Protein Location Mapping Reveals Five Principal Chromatin Types in Drosophila Cells
Filion, Guillaume J., van Bemmel, Joke G., Braunschweig, Ulrich, Talhout, Wendy, Kind, Jop, Ward, Lucas D., Brugman, Wim, de Castro, Inês J., Kerkhoven, Ron M., Bussemaker, Harmen J., van Steensel, Bas
Published in Cell (15.10.2010)
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Context-Specific Transcription Factor Functions Regulate Epigenomic and Transcriptional Dynamics during Cardiac Reprogramming
Stone, Nicole R., Gifford, Casey A., Thomas, Reuben, Pratt, Karishma J.B., Samse-Knapp, Kaitlen, Mohamed, Tamer M.A., Radzinsky, Ethan M., Schricker, Amelia, Ye, Lin, Yu, Pengzhi, van Bemmel, Joke G., Ivey, Kathryn N., Pollard, Katherine S., Srivastava, Deepak
Published in Cell stem cell (03.07.2019)
Published in Cell stem cell (03.07.2019)
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A Network Model of the Molecular Organization of Chromatin in Drosophila
van Bemmel, Joke G., Filion, Guillaume J., Rosado, Arantxa, Talhout, Wendy, de Haas, Marcel, van Welsem, Tibor, van Leeuwen, Fred, van Steensel, Bas
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Published in Molecular cell (21.02.2013)
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The bipartite TAD organization of the X-inactivation center ensures opposing developmental regulation of Tsix and Xist
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Published in Nature genetics (01.06.2019)
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Histone hypoacetylation is required to maintain late replication timing of constitutive heterochromatin
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Published in Nucleic acids research (01.01.2012)
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Bayesian network analysis of targeting interactions in chromatin
van Steensel, Bas, Braunschweig, Ulrich, Filion, Guillaume J, Chen, Menzies, van Bemmel, Joke G, Ideker, Trey
Published in Genome research (01.02.2010)
Published in Genome research (01.02.2010)
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Inversion of a topological domain leads to restricted changes in its gene expression and affects interdomain communication
Galupa, Rafael, Picard, Christel, Servant, Nicolas, Nora, Elphège P, Zhan, Yinxiu, van Bemmel, Joke G, El Marjou, Fatima, Johanneau, Colin, Borensztein, Maud, Ancelin, Katia, Giorgetti, Luca, Heard, Edith
Published in Development (Cambridge) (01.05.2022)
Published in Development (Cambridge) (01.05.2022)
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The Ftx Noncoding Locus Controls X Chromosome Inactivation Independently of Its RNA Products
Furlan, Giulia, Gutierrez Hernandez, Nancy, Huret, Christophe, Galupa, Rafael, van Bemmel, Joke Gerarda, Romito, Antonio, Heard, Edith, Morey, Céline, Rougeulle, Claire
Published in Molecular cell (03.05.2018)
Published in Molecular cell (03.05.2018)
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Systematic Protein Location Mapping Reveals Five Principal Chromatin Types in Drosophila Cells
Filion, Guillaume J., van Bemmel, Joke G., Braunschweig, Ulrich, Talhout, Wendy, Kind, Jop, Ward, Lucas D., Brugman, Wim, de Castro, Ines J., Kerkhoven, Ron M., Bussemaker, Harmen J., van Steensel, Bas
Published in Cell (01.04.2011)
Published in Cell (01.04.2011)
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A Conserved Noncoding Locus Regulates Random Monoallelic Xist Expression across a Topological Boundary
Galupa, Rafael, Nora, Elphège Pierre, Worsley-Hunt, Rebecca, Picard, Christel, Gard, Chris, van Bemmel, Joke Gerarda, Servant, Nicolas, Zhan, Yinxiu, El Marjou, Fatima, Johanneau, Colin, Diabangouaya, Patricia, Le Saux, Agnès, Lameiras, Sonia, Pipoli da Fonseca, Juliana, Loos, Friedemann, Gribnau, Joost, Baulande, Sylvain, Ohler, Uwe, Giorgetti, Luca, Heard, Edith
Published in Molecular cell (16.01.2020)
Published in Molecular cell (16.01.2020)
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Abstract 14797: Single Cell Multi-Modal Analyses Reveal Epigenomic and Transcriptomic Basis Underlying Cardiac Defects in Maternal Diabetes
Nishino, Tomohiro, Ranade, Sanjeev, Angelo, Pelonero, van Soldt, Benjamin J, Ye, Lin, Alexanian, Michael, Koback, Frances, Huang, Yu, Sadagopan, Nandhini, Padmanabhan, Arun, Thomas, Reuben, van Bemmel, Joke, Gifford, Casey, Costa, Mauro, Srivastava, Deepak
Published in Circulation (New York, N.Y.) (08.11.2022)
Published in Circulation (New York, N.Y.) (08.11.2022)
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Inversion of a topological domain leads to restricted changes in its gene expression and affects inter-domain communication
Galupa, Rafael, Picard, Christel, Servant, Nicolas, Nora, Elphege P, Zhan, Yinxiu, Joke Van Bemmel, Fatima El Marjou, Johanneau, Colin, Borensztein, Maud, Ancelin, Katia, Giorgetti, Luca, Heard, Edith
Published in bioRxiv (24.01.2022)
Published in bioRxiv (24.01.2022)
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The Transcription Factor GATA4 Regulates Cell Type-Specific Splicing through Direct Interaction with RNA in Human iPS-Derived Cardiac Progenitors
Zhu, Lili, Choudhary, Krishna, Gonzalez-Teran, Barbara, Ang, Yen-Sin, Thomas, Reuben, Stone, Nicole R., Liu, Lei, Zhou, Ping, Zhu, Chenchen, Ruan, Hongmei, Huang, Yu, Jin, Shibo, Pelonero, Angelo, Koback, Frances, Padmanabhan, Arun, Sadagopan, Nandhini, Hsu, Austin, Costa, Mauro W., Gifford, Casey A., van Bemmel, Joke, Hüttenhain, Ruth, Vedantham, Vasanth, Conklin, Bruce R., Black, Brian L., Bruneau, Benoit G., Steinmetz, Lars, Krogan, Nevan J., Pollard, Katherine S., Srivastava, Deepak
Published in Circulation (New York, N.Y.) (08.08.2022)
Published in Circulation (New York, N.Y.) (08.08.2022)
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Journal Article
The Ftx Noncoding Locus Controls X Chromosome Inactivation Independently of Its RNA Products
Furlan, Giulia, Gutierrez Hernandez, Nancy, Huret, Christophe, Galupa, Rafael, van Bemmel, Joke Gerarda, Romito, Antonio, Heard, Edith, Morey, Céline, Rougeulle, Claire
Published in Molecular cell (01.05.2018)
Published in Molecular cell (01.05.2018)
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Journal Article
The Insulator Protein SU
van Bemmel, Joke G, Pagie, Ludo, Braunschweig, Ulrich, Brugman, Wim, Meuleman, Wouter, Kerkhoven, Ron M, van Steensel, Bas
Published in PloS one (24.11.2010)
Published in PloS one (24.11.2010)
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