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Earl Grey: A Fully Automated User-Friendly Transposable Element Annotation and Analysis Pipeline
Baril, Tobias, Galbraith, James, Hayward, Alex
Published in Molecular biology and evolution (02.04.2024)
Published in Molecular biology and evolution (02.04.2024)
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Transposable element exonization generates a reservoir of evolving and functional protein isoforms
Arribas, Yago A., Baudon, Blandine, Rotival, Maxime, Suárez, Guadalupe, Bonté, Pierre-Emmanuel, Casas, Vanessa, Roubert, Apollinaire, Klein, Paul, Bonnin, Elisa, Mchich, Basma, Legoix, Patricia, Baulande, Sylvain, Sadacca, Benjamin, Diharce, Julien, Waterfall, Joshua J., Etchebest, Catherine, Carrascal, Montserrat, Goudot, Christel, Quintana-Murci, Lluís, Burbage, Marianne, Merlotti, Antonela, Amigorena, Sebastian
Published in Cell (26.12.2024)
Published in Cell (26.12.2024)
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Identification of an active miniature inverted‐repeat transposable element mJing in rice
Tang, Yanyan, Ma, Xin, Zhao, Shuangshuang, Xue, Wei, Zheng, Xu, Sun, Hongying, Gu, Ping, Zhu, Zuofeng, Sun, Chuanqing, Liu, Fengxia, Tan, Lubin
Published in The Plant journal : for cell and molecular biology (01.05.2019)
Published in The Plant journal : for cell and molecular biology (01.05.2019)
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Transposable element expansion and low-level piRNA silencing in grasshoppers may cause genome gigantism
Liu, Xuanzeng, Majid, Muhammad, Yuan, Hao, Chang, Huihui, Zhao, Lina, Nie, Yimeng, He, Lang, Liu, Xiaojing, He, Xiaoting, Huang, Yuan
Published in BMC biology (28.10.2022)
Published in BMC biology (28.10.2022)
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Transposable element-derived double-stranded RNAs stimulate pro-inflammatory activation in human astrocytes
McEntee, Cali, Cavalier, Alyssa, LaRocca, Thomas
Published in Physiology (Bethesda, Md.) (01.05.2024)
Published in Physiology (Bethesda, Md.) (01.05.2024)
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Epigenetic Components of Myalgic Encephalomyelitis/Chronic Fatigue Syndrome Uncover Potential Transposable Element Activation
Almenar-Pérez, Eloy, Ovejero, Tamara, Sánchez-Fito, Teresa, Espejo, José A., Nathanson, Lubov, Oltra, Elisa
Published in Clinical therapeutics (01.04.2019)
Published in Clinical therapeutics (01.04.2019)
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Transposable element dysregulation in systemic lupus erythematosus and regulation by histone conformation and Hsp90
Kelly, Maurer, Lihua, Shi, Zhe, Zhang, Li, Song, Yoselin, Paucar, Michelle, Petri, Sullivan Kathleen, E.
Published in Clinical immunology (Orlando, Fla.) (01.12.2018)
Published in Clinical immunology (Orlando, Fla.) (01.12.2018)
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Identification of an active miniature inverted‐repeat transposable element mJ ing in rice
Tang, Yanyan, Ma, Xin, Zhao, Shuangshuang, Xue, Wei, Zheng, Xu, Sun, Hongying, Gu, Ping, Zhu, Zuofeng, Sun, Chuanqing, Liu, Fengxia, Tan, Lubin
Published in The Plant journal : for cell and molecular biology (01.05.2019)
Published in The Plant journal : for cell and molecular biology (01.05.2019)
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Characterizations of transposable element (TE) landscape in Rhizoctonia solani
Razali, Nurhani Mat, Bakar, Mohd Faizal Abu, Huat, Cheah Boon, Nadarajah, Kalaivani
Published in AIP conference proceedings (27.06.2019)
Published in AIP conference proceedings (27.06.2019)
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The developmental control of transposable elements and the evolution of higher species
Friedli, Marc, Trono, Didier
Published in Annual review of cell and developmental biology (13.11.2015)
Published in Annual review of cell and developmental biology (13.11.2015)
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Evolution of bird genomes—a transposon's‐eye view
Kapusta, Aurélie, Suh, Alexander
Published in Annals of the New York Academy of Sciences (01.02.2017)
Published in Annals of the New York Academy of Sciences (01.02.2017)
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The reference genome and abiotic stress responses of the model perennial grass Brachypodium sylvaticum
Lei, Li, Gordon, Sean P., Liu, Lifeng, Sade, Nir, Lovell, John T., Rubio Wilhelmi, Maria Mar, Singan, Vasanth, Sreedasyam, Avinash, Hestrin, Rachel, Phillips, Jeremy, Hernandez, Bryan T., Barry, Kerrie, Shu, Shengqiang, Jenkins, Jerry, Schmutz, Jeremy, Goodstein, David M., Thilmony, Roger, Blumwald, Eduardo, Vogel, John P.
Published in G3 : genes - genomes - genetics (26.10.2023)
Published in G3 : genes - genomes - genetics (26.10.2023)
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Widespread establishment and regulatory impact of Alu exons in human genes
Shen, Shihao, Lin, Lan, Cai, James J, Jiang, Peng, Kenkel, Elizabeth J, Stroik, Mallory R, Sato, Seiko, Davidson, Beverly L, Xing, Yi
Published in Proceedings of the National Academy of Sciences - PNAS (15.02.2011)
Published in Proceedings of the National Academy of Sciences - PNAS (15.02.2011)
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The reference genome and abiotic stress responses of the model perennial grass Brachypodium sylvaticum
Lei, Li, Gordon, Sean P, Liu, Lifeng, Sade, Nir, Lovell, John T, Rubio Wilhelmi, Maria Del Mar, Singan, Vasanth, Sreedasyam, Avinash, Hestrin, Rachel, Phillips, Jeremy, Hernandez, Bryan T, Barry, Kerrie, Shu, Shengqiang, Jenkins, Jerry, Schmutz, Jeremy, Goodstein, David M, Thilmony, Roger, Blumwald, Eduardo, Vogel, John P
Published in G3 : genes - genomes - genetics (01.01.2024)
Published in G3 : genes - genomes - genetics (01.01.2024)
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