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STGIC: A graph and image convolution-based method for spatial transcriptomic clustering
Zhang, Chen, Gao, Junhui, Chen, Hong-Yu, Kong, Lingxin, Cao, Guangshuo, Guo, Xiangyu, Liu, Wei, Ren, Bin, Wei, Dong-Qing
Published in PLoS computational biology (01.02.2024)
Published in PLoS computational biology (01.02.2024)
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Spatial transcriptomic of hippocampal subfield‐specific pathology in Alzheimer’s disease and Primary Age‐Related Tauopathy (PART)
Wu, Di, Zhang, Qilei, Liu, Anqi, Gong, Yun, Tianying, Li, Xiao, Zhengwu, Xiao, Hongmei, Su, Kuan‐Jui, Qiu, Chuan, Shen, Hui, Yan, Xiaoxin, Deng, Hong‐Wen
Published in Alzheimer's & dementia (01.12.2024)
Published in Alzheimer's & dementia (01.12.2024)
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Spatial Transcriptomic Analysis Using R-Based Computational Machine Learning Reveals the Genetic Profile of Yang or Yin Deficiency Syndrome in Chinese Medicine Theory
Zhang, Cheng, Tam, Chi wing, Tang, Guoyi, Chen, Yuanyuan, Wang, Ning, Feng, Yibin
Published in Evidence-based complementary and alternative medicine (2022)
Published in Evidence-based complementary and alternative medicine (2022)
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Abstract 2032: Comprehensive spatial transcriptomic analysis of an integrated, diverse cohort reveals distinct molecular topographic patterns in triple negative breast cancer
Bassiouni, Rania, Idowu, Michael, Gibbs, Lee D., Grizzard, Pamela J., Webb, Michelle G., Noriega, Ashley, Robila, Valentina, Craig, David W., Carpten, John D.
Published in Cancer research (Chicago, Ill.) (15.06.2022)
Published in Cancer research (Chicago, Ill.) (15.06.2022)
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STGIC: a graph and image convolution-based method for spatial transcriptomic clustering
Zhang, Chen, Gao, Junhui, Kong, Lingxin, cao, Guangshuo, Guo, Xiangyu, Liu, Wei
Year of Publication 19.03.2023
Year of Publication 19.03.2023
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Analysis of intracellular communication reveals consistent gene changes associated with early-stage acne skin
Deng, Min, Odhiambo, Woodvine O., Qin, Min, To, Thao Tam, Brewer, Gregory M., Kheshvadjian, Alexander R., Cheng, Carol, Agak, George W.
Published in Cell communication and signaling (14.08.2024)
Published in Cell communication and signaling (14.08.2024)
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STGIC: a graph and image convolution-based method for spatial transcriptomic clustering
Zhang, Chen, Gao, Junhui, Kong, Lingxin, cao, Guangshuo, Guo, Xiangyu, Liu, Wei
Published in arXiv.org (23.10.2023)
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Published in arXiv.org (23.10.2023)
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Spatial transcriptomic library preparation materials and methods
MANZO ANDREA, WHITE ANDREW, HU JUN, OSTROW ANDREW, FISCHER, JU RG, CLAMONS STEPHANE, KAPOOR GIRISH, MAZOR BARUCH, EKSTRAND MAGNUS, MANNS, J ¨ 1 RGEN, APREA CHARLES
Year of Publication 07.03.2025
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Year of Publication 07.03.2025
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Single-cell and spatial transcriptomics: deciphering brain complexity in health and disease
Piwecka, Monika, Rajewsky, Nikolaus, Rybak-Wolf, Agnieszka
Published in Nature reviews. Neurology (01.06.2023)
Published in Nature reviews. Neurology (01.06.2023)
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Dissecting mammalian reproduction with spatial transcriptomics
Zhang, Xin, Cao, Qiqi, Rajachandran, Shreya, Grow, Edward J, Evans, Melanie, Chen, Haiqi
Published in Human reproduction update (02.11.2023)
Published in Human reproduction update (02.11.2023)
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Abstract 6612: Deep and scalable spatial transcriptomics for oncology research
Foley, Joseph W., Teo, Wei K., Tay, Joshua K.
Published in Cancer research (Chicago, Ill.) (21.04.2025)
Published in Cancer research (Chicago, Ill.) (21.04.2025)
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Spatial Transcriptomics Resolve an Emphysema-Specific Lymphoid Follicle B Cell Signature in Chronic Obstructive Pulmonary Disease
Rojas-Quintero, Joselyn, Ochsner, Scott A., New, Felicia, Divakar, Prajan, Yang, Chen Xi, Wu, Tianshi David, Robinson, Jerid, Chandrashekar, Darshan Shimoga, Banovich, Nicholas E., Rosas, Ivan O., Sauler, Maor, Kheradmand, Farrah, Gaggar, Amit, Margaroli, Camilla, San Jose Estepar, Raul, McKenna, Neil J., Polverino, Francesca
Published in American journal of respiratory and critical care medicine (01.01.2024)
Published in American journal of respiratory and critical care medicine (01.01.2024)
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OP0128 SPATIAL TRANSCRIPTOMICS IMPLICATES GLANDULAR CELL INVOLVEMENT IN PATHOPHYSIOLOGY OF SJÖGREN’S DISEASE
Yao, S., Wilbrink, R., Czarnota, P., Marlin, M. C., Khatri, B., Stolarczyk, A. M., Pritchett Frazee, C., Li, C., Wright, K., Tessneer, K. L., James, J. A., Scofield, R. H., Adrianto, I., Rasmussen, A., Guthridge, J. M., Farris, A. D., Lessard, C. J.
Published in Annals of the rheumatic diseases (01.06.2024)
Published in Annals of the rheumatic diseases (01.06.2024)
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Leveraging Spatial Transcriptomics to Decode Craniofacial Development
Piña, Jeremie Oliver, Raju, Resmi, Myo, Aye Chan, Stipano, Evan, Wright, Malachi, D’Souza, Rena N.
Published in Genes (03.05.2025)
Published in Genes (03.05.2025)
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Zika virus co-opts microRNA networks to persist in placental niches detected by spatial transcriptomics
Barrozo, Enrico R., Seferovic, Maxim D., Hamilton, Mark P., Moorshead, David N., Jochum, Michael D., Do, Trang, O’Neil, Derek S., Suter, Melissa A., Aagaard, Kjersti M.
Published in American journal of obstetrics and gynecology (01.02.2024)
Published in American journal of obstetrics and gynecology (01.02.2024)
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Spatial Transcriptomics Resolve an Emphysema-specific Lymphoid Follicle B Cell Signature in COPD
Rojas-Quintero, Joselyn, Ochsner, Scott A, New, Felicia, Divakar, Prajan, Yang, Chen Xi, Wu, Tianshi David, Robinson, Jerid, Shimoga Chandrashekar, Darshan, Banovich, Nicholas E, Rosas, Ivan O., Sauler, Maor, Kheradmand, Farrah, Gaggar, Amit, Margaroli, Camilla, San Jose Estepar, Raul, McKenna, Neil J, Polverino, Francesca
Published in American journal of respiratory and critical care medicine (08.12.2023)
Published in American journal of respiratory and critical care medicine (08.12.2023)
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Automation of Spatial Transcriptomics library preparation to enable rapid and robust insights into spatial organization of tissues
Berglund, Emelie, Saarenpää, Sami, Jemt, Anders, Gruselius, Joel, Larsson, Ludvig, Bergenstråhle, Ludvig, Lundeberg, Joakim, Giacomello, Stefania
Published in BMC genomics (15.04.2020)
Published in BMC genomics (15.04.2020)
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EPCO-44. SPATIAL TRANSCRIPTOMICS ENABLES STATISTICAL MODELING OF SEX DIFFERENCE IN GENE CO-EXPRESSION NETWORK AND IMMUNE LANDSCAPE OF GLIOBLASTOMA
Hao, Yue, Baker, Angela, Reid, George, Luo, Jingqin, Hilbush, Brian, Otero, Marcos, Streck, Christopher, Fink, Karen L, Snipes, George J, Mickey, Bruce E, Sloan, Andrew E, Barnholtz-Sloan, Jill S, Berens, Michael E
Published in Neuro-oncology (Charlottesville, Va.) (11.11.2024)
Published in Neuro-oncology (Charlottesville, Va.) (11.11.2024)
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Long‐term neuropathological effects of amyloid‐β immunization revealed by spatial transcriptomics
van Olst, Lynn, Simonton, Brooke, Ramakrishnan, Abhirami, Piehl, Natalie, Teregulova, Victoria, Norman, Jeanette, Nicoll, James AR, Boche, Delphine, Gate, David
Published in Alzheimer's & dementia (01.12.2023)
Published in Alzheimer's & dementia (01.12.2023)
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