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Single-cell Mayo Map (scMayoMap): an easy-to-use tool for cell type annotation in single-cell RNA-sequencing data analysis
Yang, Lu, Ng, Yan Er, Sun, Haipeng, Li, Ying, Chini, Lucas C. S., LeBrasseur, Nathan K., Chen, Jun, Zhang, Xu
Published in BMC biology (20.10.2023)
Published in BMC biology (20.10.2023)
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Journal Article
Multimodal single‐cell/nucleus RNA‐sequencing data analysis uncovers molecular networks between disease‐associated microglia and astrocytes with implications for drug repurposing in Alzheimer’s disease
Cheng, Feixiong, Xu, Jielin, Zhang, Pengyue, Zhou, Yadi, Pieper, Andrew A., Cummings, Jeffrey L., Leverenz, James B.
Published in Alzheimer's & dementia (01.12.2021)
Published in Alzheimer's & dementia (01.12.2021)
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Journal Article
Rainbow: a tool for large-scale whole-genome sequencing data analysis using cloud computing
Zhao, Shanrong, Prenger, Kurt, Smith, Lance, Messina, Thomas, Fan, Hongtao, Jaeger, Edward, Stephens, Susan
Published in BMC genomics (27.06.2013)
Published in BMC genomics (27.06.2013)
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Journal Article
RNA Sequencing Data Analysis of Oligoasthenoteratozoospermia Patients' Sperms and Effects of Curcumin on the Expression of Some Genes during Sperm Cryopreservation and Freeze-Thawing Process
Naseri, Farnoosh, Siasy, Elham, Angaji, Seyed Abdolhamid, Peyvandi, Maryam
Published in Iranian journal of public health (01.01.2025)
Published in Iranian journal of public health (01.01.2025)
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Journal Article
RNA Sequencing Data Analysis of Oligoasthenoteratozoo-spermia Patients' Sperms and Effects of Curcumin on the Expression of Some Genes during Sperm Cryopreservation and Freeze-Thawing Process
Naseri, Farnoosh, Siasy, Elham, Angaji, Seyed Abdolhamid, Peyvandi, Maryam
Published in Iranian journal of public health (01.01.2025)
Published in Iranian journal of public health (01.01.2025)
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Journal Article
Single-cell Mayo Map ( scMayoMap ): an easy-to-use tool for cell type annotation in single-cell RNA-sequencing data analysis
Yang, Lu, Ng, Yan Er, Sun, Haipeng, Li, Ying, Chini, Lucas C S, LeBrasseur, Nathan K, Chen, Jun, Zhang, Xu
Published in bioRxiv (04.05.2023)
Published in bioRxiv (04.05.2023)
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Journal Article
Paper
Comparative Analysis of Plastid Genomes in the Non-photosynthetic Genus Thismia Reveals Ongoing Gene Set Reduction
Sophia V. Yudina, Mikhail I. Schelkunov, Lars Nauheimer, Darren Crayn, Sahut Chantanaorrapint, Michal Hroneš, Michal Sochor, Martin Dančák, Shek-Shing Mar, Hong Truong Luu, Maxim S. Nuraliev, Maria D. Logacheva
Published in Frontiers in Plant Science (16.03.2021)
Published in Frontiers in Plant Science (16.03.2021)
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Journal Article
Impact of proanthocyanidin-rich apple intake on gut microbiota composition and polyphenol metabolomic activity in healthy mildly hypercholesterolemic subjects
Koutsos, Athanasios, Ulaszewska, Maria M., Trošt, Kajetan, Stanstrup, Jan, Mariani, Letizia, Galvin, Amanda, Braune, Tanya, Fava, Francesca, Franciosi, Elena, Pindo, Massimo, Scholz, Matthias, Mattivi, Fulvio, Tuohy, Kieran, Lovegrove, Julie
Published in Proceedings of the Nutrition Society (2020)
Published in Proceedings of the Nutrition Society (2020)
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Journal Article
Down-regulated cylindromatosis enhances NF-κB activation and aggravates inflammation in HBV-ACLF patients
Zhang, Xueyun, Zhang, Yao, Zhou, Pu, Ai, Jingwen, Liu, Xiaoqin, Zhang, Quanbao, Wang, Zhengxin, Wang, Hongyan, Zhang, Wenhong, Zhang, Jiming, Huang, Yuxian
Published in Emerging microbes & infections (31.12.2022)
Published in Emerging microbes & infections (31.12.2022)
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Journal Article
Enumeration of deregulated miRNAs in liquid and tissue biopsies of cervical cancer
Shukla, Vaibhav, Varghese, Vinay Koshy, Kabekkodu, Shama Prasada, Mallya, Sandeep, Chakrabarty, Sanjiban, Jayaram, Pradyumna, Pandey, Deeksha, Banerjee, Sourjya, Sharan, Krishna, Satyamoorthy, Kapaettu
Published in Gynecologic oncology (01.10.2019)
Published in Gynecologic oncology (01.10.2019)
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Journal Article
nf-core/airrflow: An adaptive immune receptor repertoire analysis workflow employing the Immcantation framework
Gabernet, Gisela, Marquez, Susanna, Bjornson, Robert, Peltzer, Alexander, Meng, Hailong, Aron, Edel, Lee, Noah Y., Jensen, Cole G., Ladd, David, Polster, Mark, Hanssen, Friederike, Heumos, Simon, Yaari, Gur, Kowarik, Markus C., Nahnsen, Sven, Kleinstein, Steven H.
Published in PLoS computational biology (26.07.2024)
Published in PLoS computational biology (26.07.2024)
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Journal Article
Comprehensive Genomic and Transcriptomic Analysis of Sclerosing Pneumocytoma
Yeh, Yi-Chen, Chu, Ping-Yuan, Lin, Shin-Ying, Wang, Shu-Ying, Ho, Hsiang-Ling, Wang, Yu-Chao
Published in Modern pathology (01.01.2024)
Published in Modern pathology (01.01.2024)
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Journal Article
Advancing clinical genomics and precision medicine with GVViZ: FAIR bioinformatics platform for variable gene-disease annotation, visualization, and expression analysis
Ahmed, Zeeshan, Renart, Eduard Gibert, Zeeshan, Saman, Dong, XinQi
Published in Human genomics (26.06.2021)
Published in Human genomics (26.06.2021)
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Journal Article
Study on intestinal parasitic infections and gut microbiota in cancer patients at a tertiary teaching hospital in Malaysia
Siti Farah Norasyikeen, Sidi Omar, Ngui, Romano, Syaza Zafirah, Ab Rahman, Md Zoqratt, Muhammad Zarul Hanifah, Eng, Wilhelm Wei Han, Ayub, Qasim, Amin Nordin, Syafinaz, Narcisse Mary Sither Joseph, Vesudian, Musa, Sabri, Lim, Yvonne Ai Lian
Published in Scientific reports (13.06.2024)
Published in Scientific reports (13.06.2024)
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Journal Article
INPP4B overexpression and c‐KIT downregulation in human achalasia
Bonora, E., Bianco, F., Stanzani, A., Giancola, F., Astolfi, A., Indio, V., Evangelisti, C., Martelli, A. M., Boschetti, E., Lugaresi, M., Ioannou, A., Torresan, F., Stanghellini, V., Clavenzani, P., Seri, M., Moonen, A., Van Beek, K., Wouters, M., Boeckxstaens, G. E., Zaninotto, G., Mattioli, S., De Giorgio, R.
Published in Neurogastroenterology and motility (01.09.2018)
Published in Neurogastroenterology and motility (01.09.2018)
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Journal Article
Targeted resequencing of phosphorus metabolism‑related genes in 86 patients with hypophosphatemic rickets/osteomalacia
Gu, Jiemei, Wang, Chun, Zhang, Hao, Yue, Hua, Hu, Weiwei, He, Jinwei, Fu, Wenzhen, Zhang, Zhenlin
Published in International journal of molecular medicine (01.09.2018)
Published in International journal of molecular medicine (01.09.2018)
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Journal Article
Association study of rs17782313 polymorphism near MC4R gene with obesity/overweight, BMI, and hedonic hunger among women from Northwestern Iran
Narjabadifam, Mahan, Bonyadi, Morteza, Rafat, Seyed Abbas, Mahdavi, Reza, Aliasghari, Fereshteh
Published in Mediterranean Journal of nutrition and metabolism (01.01.2021)
Published in Mediterranean Journal of nutrition and metabolism (01.01.2021)
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Journal Article