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Phylogenomics resolves the timing and pattern of insect evolution
Misof, Bernhard, Liu, Shanlin, Meusemann, Karen, Peters, Ralph S., Donath, Alexander, Mayer, Christoph, Frandsen, Paul B., Ware, Jessica, Flouri, Tomáš, Beutel, Rolf G., Niehuis, Oliver, Petersen, Malte, Izquierdo-Carrasco, Fernando, Wappler, Torsten, Rust, Jes, Aberer, Andre J., Aspöck, Ulrike, Aspöck, Horst, Bartel, Daniela, Blanke, Alexander, Berger, Simon, Böhm, Alexander, Buckley, Thomas R., Calcott, Brett, Chen, Junqing, Friedrich, Frank, Fukui, Makiko, Fujita, Mari, Greve, Carola, Grobe, Peter, Gu, Shengchang, Huang, Ying, Jermiin, Lars S., Kawahara, Akito Y., Krogmann, Lars, Kubiak, Martin, Lanfear, Robert, Letsch, Harald, Li, Yiyuan, Li, Zhenyu, Li, Jiguang, Lu, Haorong, Machida, Ryuichiro, Mashimo, Yuta, Kapli, Pashalia, McKenna, Duane D., Meng, Guanliang, Nakagaki, Yasutaka, Navarrete-Heredia, José Luis, Ott, Michael, Ou, Yanxiang, Pass, Günther, Podsiadlowski, Lars, Pohl, Hans, von Reumont, Björn M., Schütte, Kai, Sekiya, Kaoru, Shimizu, Shota, Slipinski, Adam, Stamatakis, Alexandros, Song, Wenhui, Su, Xu, Szucsich, Nikolaus U., Tan, Meihua, Tan, Xuemei, Tang, Min, Tang, Jingbo, Timelthaler, Gerald, Tomizuka, Shigekazu, Trautwein, Michelle, Tong, Xiaoli, Uchifune, Toshiki, Walzl, Manfred G., Wiegmann, Brian M., Wilbrandt, Jeanne, Wipfler, Benjamin, Wong, Thomas K. F., Wu, Gengxiong, Xie, Yinlong, Yang, Shenzhou, Yang, Qing, Yeates, David K., Yoshizawa, Kazunori, Zhang, Qing, Zhang, Rui, Zhang, Wenwei, Zhang, Yunhui, Zhao, Jing, Zhou, Chengran, Zhou, Lili, Ziesmann, Tanja, Zou, Shijie, Li, Yingrui, Xu, Xun, Zhang, Yong, Yang, Huanming, Wang, Jian, Wang, Jun, Kjer, Karl M., Zhou, Xin
Published in Science (American Association for the Advancement of Science) (07.11.2014)
Published in Science (American Association for the Advancement of Science) (07.11.2014)
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Phylogenomics reveals multiple losses of nitrogen-fixing root nodule symbiosis
Griesmann, Maximilian, Chang, Yue, Liu, Xin, Song, Yue, Haberer, Georg, Crook, Matthew B., Billault-Penneteau, Benjamin, Lauressergues, Dominique, Keller, Jean, Imanishi, Leandro, Roswanjaya, Yuda Purwana, Kohlen, Wouter, Pujic, Petar, Battenberg, Kai, Alloisio, Nicole, Liang, Yuhu, Hilhorst, Henk, Salgado, Marco G., Hocher, Valerie, Gherbi, Hassen, Svistoonoff, Sergio, Doyle, Jeff J., He, Shixu, Xu, Yan, Xu, Shanyun, Qu, Jing, Gao, Qiang, Fang, Xiaodong, Fu, Yuan, Normand, Philippe, Berry, Alison M., Wall, Luis G., Ané, Jean-Michel, Pawlowski, Katharina, Xu, Xun, Yang, Huanming, Spannagl, Manuel, Mayer, Klaus F. X., Wong, Gane Ka-Shu, Parniske, Martin, Delaux, Pierre-Marc, Cheng, Shifeng
Published in Science (American Association for the Advancement of Science) (13.07.2018)
Published in Science (American Association for the Advancement of Science) (13.07.2018)
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Phylogenomics of Cas4 family nucleases
Hudaiberdiev, Sanjarbek, Shmakov, Sergey, Wolf, Yuri I., Terns, Michael P., Makarova, Kira S., Koonin, Eugene V.
Published in BMC evolutionary biology (28.11.2017)
Published in BMC evolutionary biology (28.11.2017)
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Phylogenomics and antimicrobial resistance of the leprosy bacillus Mycobacterium leprae
Benjak, Andrej, Avanzi, Charlotte, Singh, Pushpendra, Loiseau, Chloé, Girma, Selfu, Busso, Philippe, Fontes, Amanda N. Brum, Miyamoto, Yuji, Namisato, Masako, Bobosha, Kidist, Salgado, Claudio G., da Silva, Moisés B., Bouth, Raquel C., Frade, Marco A. C., Filho, Fred Bernardes, Barreto, Josafá G., Nery, José A. C., Bührer-Sékula, Samira, Lupien, Andréanne, Al-Samie, Abdul R., Al-Qubati, Yasin, Alkubati, Abdul S., Bretzel, Gisela, Vera-Cabrera, Lucio, Sakho, Fatoumata, Johnson, Christian R., Kodio, Mamoudou, Fomba, Abdoulaye, Sow, Samba O., Gado, Moussa, Konaté, Ousmane, Stefani, Mariane M. A., Penna, Gerson O., Suffys, Philip N., Sarno, Euzenir Nunes, Moraes, Milton O., Rosa, Patricia S., Baptista, Ida M. F. Dias, Spencer, John S., Aseffa, Abraham, Matsuoka, Masanori, Kai, Masanori, Cole, Stewart T.
Published in Nature communications (24.01.2018)
Published in Nature communications (24.01.2018)
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Morphology, behavior, and phylogenomics of Oxytoxum lohmannii, Dinoflagellata
Cooney, Elizabeth C., Jacobson, Dean M., Wolfe, Gordon V., Bright, Kelley J., Saldarriaga, Juan F., Keeling, Patrick J., Leander, Brian S., Strom, Suzanne L.
Published in The Journal of eukaryotic microbiology (01.11.2024)
Published in The Journal of eukaryotic microbiology (01.11.2024)
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Plastome phylogenomics provide new perspective into the phylogeny and evolution of Betulaceae (Fagales)
Yang, Zhen, Ma, Wenxu, Yang, Xiaohong, Wang, Lujun, Zhao, Tiantian, Liang, Lisong, Wang, Guixi, Ma, Qinghua
Published in BMC plant biology (24.12.2022)
Published in BMC plant biology (24.12.2022)
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Phylogenomics and biogeography of Torreya (Taxaceae)—Integrating data from three organelle genomes, morphology, and fossils and a practical method for reducing missing data from RAD‐seq
Zhou, Wenbin, Harris, AJ, Xiang, Qiu‐Yun (Jenny)
Published in Journal of systematics and evolution : JSE (01.11.2022)
Published in Journal of systematics and evolution : JSE (01.11.2022)
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Phylogenomics of the Maverick Virus-Like Mobile Genetic Elements of Vertebrates
Barreat, Jose Gabriel Nino, Katzourakis, Aris
Published in Molecular biology and evolution (01.05.2021)
Published in Molecular biology and evolution (01.05.2021)
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A Comparative Analysis of the Lyve-SET Phylogenomics Pipeline for Genomic Epidemiology of Foodborne Pathogens
Katz, Lee S., Griswold, Taylor, Williams-Newkirk, Amanda J., Wagner, Darlene, Petkau, Aaron, Sieffert, Cameron, Van Domselaar, Gary, Deng, Xiangyu, Carleton, Heather A.
Published in Frontiers in Microbiology (13.03.2017)
Published in Frontiers in Microbiology (13.03.2017)
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A congruent solution to arthropod phylogeny: phylogenomics, microRNAs and morphology support monophyletic Mandibulata
Rota-Stabelli, Omar, Campbell, Lahcen, Brinkmann, Henner, Edgecombe, Gregory D., Longhorn, Stuart J., Peterson, Kevin J., Pisani, Davide, Philippe, Hervé, Telford, Maximilian J.
Published in Proceedings of the Royal Society. B, Biological sciences (22.01.2011)
Published in Proceedings of the Royal Society. B, Biological sciences (22.01.2011)
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Phylogenomics of manakins (Aves: Pipridae) using alternative locus filtering strategies based on informativeness
Leite, Rafael N., Kimball, Rebecca T., Braun, Edward L., Derryberry, Elizabeth P., Hosner, Peter A., Derryberry, Graham E., Anciães, Marina, McKay, Jessica S., Aleixo, Alexandre, Ribas, Camila C., Brumfield, Robb T., Cracraft, Joel
Published in Molecular phylogenetics and evolution (01.02.2021)
Published in Molecular phylogenetics and evolution (01.02.2021)
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A shallow‐scale phylogenomics approach reveals repeated patterns of diversification among sympatric lineages of cryptic Neotropical aquatic beetles (Coleoptera: Noteridae)
Baca, Stephen M., Gustafson, Grey T., DeRaad, Devon A., Alexander, Alana, Hime, Paul M., Short, Andrew E. Z.
Published in Systematic entomology (01.01.2025)
Published in Systematic entomology (01.01.2025)
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Phylogenomics resolves the backbone of Poales and identifies signals of hybridization and polyploidy
Wang, Huijun, Wu, Zhigang, Li, Tao, Zhao, Jindong
Published in Molecular phylogenetics and evolution (01.11.2024)
Published in Molecular phylogenetics and evolution (01.11.2024)
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Phylogenomics and phylogeographic model testing using convolutional neural networks reveal a history of recent admixture in the Canarian Kleinia neriifolia
Rincón Barrado, Mario, Perez, Manolo, Villaverde, Tamara, García‐Verdugo, Carlos, Caujapé‐Castells, Juli, Riina, Ricarda, Sanmartín, Isabel
Published in Molecular ecology (01.11.2024)
Published in Molecular ecology (01.11.2024)
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PHYLOGENOMICS AND PLASTOME EVOLUTION OF THE CHLORIDOID GRASSES (CHLORIDOIDEAE: POACEAE)
Duvall, Melvin R., Fisher, Amanda E., Columbus, J. Travis, Ingram, Amanda L., Wysocki, William P., Burke, Sean V., Clark, Lynn G., Kelchner, Scot A.
Published in International journal of plant sciences (01.03.2016)
Published in International journal of plant sciences (01.03.2016)
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