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General Kernel Machine Methods for Multi‐Omics Integration and Genome‐Wide Association Testing With Related Individuals
Little, Amarise, Zhao, Ni, Mikhaylova, Anna, Zhang, Angela, Ling, Wodan, Thibord, Florian, Johnson, Andrew D., Raffield, Laura M., Curran, Joanne E., Blangero, John, O'Connell, Jeffrey R., Xu, Huichun, Rotter, Jerome I., Rich, Stephen S., Rice, Kenneth M., Chen, Ming‐Huei, Reiner, Alexander, Kooperberg, Charles, Vu, Thao, Hou, Lifang, Fornage, Myriam, Loos, Ruth J.F., Kenny, Eimear, Mathias, Rasika, Becker, Lewis, Smith, Albert V., Boerwinkle, Eric, Yu, Bing, Thornton, Timothy, Wu, Michael C.
Published in Genetic epidemiology (01.01.2025)
Published in Genetic epidemiology (01.01.2025)
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Explore key genes of Crohn’s disease based on glycerophospholipid metabolism: A comprehensive analysis Utilizing Mendelian Randomization, Multi-Omics integration, Machine Learning, and SHAP methodology
Chen, Changan, Quan, Juanhua, Chen, Xintian, Yang, Tingmei, Yu, Caiyuan, Ye, Shicai, Yang, Yuping, Wu, Xiu, Jiang, Danxian, Weng, Yijie
Published in International immunopharmacology (15.11.2024)
Published in International immunopharmacology (15.11.2024)
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Endotypes of severe neutrophilic and eosinophilic asthma from multi‐omics integration of U‐BIOPRED sputum samples
Kermani, Nazanin Zounemat, Li, Chuan‐Xing, Versi, Ali, Badi, Yusef, Sun, Kai, Abdel‐Aziz, Mahmoud I, Bonatti, Martina, Maitland‐van der Zee, Anke‐Hilse, Djukanovic, Ratko, Wheelock, Åsa, Dahlen, Sven‐Erik, Howarth, Peter, Guo, Yike, Chung, Kian Fan, Adcock, Ian M.
Published in Clinical and translational medicine (01.07.2024)
Published in Clinical and translational medicine (01.07.2024)
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A BAYESIAN NETWORK-BASED APPROACH FOR MULTI-OMICS INTEGRATION TO REVEAL UNDERLYING MECHANISMS OF HEALTHY AGING
Leshchyk, Anastasia, Monti, Stefano, Sebastiani, Paola
Published in Innovation in aging (21.12.2023)
Published in Innovation in aging (21.12.2023)
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Deep learning-based approaches for multi-omics data integration and analysis
Ballard, Jenna L., Wang, Zexuan, Li, Wenrui, Shen, Li, Long, Qi
Published in BioData mining (02.10.2024)
Published in BioData mining (02.10.2024)
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CLCLSA: Cross-omics linked embedding with contrastive learning and self attention for integration with incomplete multi-omics data
Zhao, Chen, Liu, Anqi, Zhang, Xiao, Cao, Xuewei, Ding, Zhengming, Sha, Qiuying, Shen, Hui, Deng, Hong-Wen, Zhou, Weihua
Published in Computers in biology and medicine (01.03.2024)
Published in Computers in biology and medicine (01.03.2024)
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Integrative analysis of multi-omics data to detect the underlying molecular mechanisms for obesity in vivo in humans
Zhang, Qiang, Meng, Xiang-He, Qiu, Chuan, Shen, Hui, Zhao, Qi, Zhao, Lan-Juan, Tian, Qing, Sun, Chang-Qing, Deng, Hong-Wen
Published in Human genomics (14.05.2022)
Published in Human genomics (14.05.2022)
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CLCLSA: Cross-omics Linked embedding with Contrastive Learning and Self Attention for multi-omics integration with incomplete multi-omics data
Zhao, Chen, Liu, Anqi, Zhang, Xiao, Cao, Xuewei, Ding, Zhengming, Sha, Qiuying, Shen, Hui, Deng, Hong-Wen, Zhou, Weihua
Published in Research square (02.05.2023)
Published in Research square (02.05.2023)
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CLCLSA: Cross-omics Linked embedding with Contrastive Learning and Self Attention for multi-omics integration with incomplete multi-omics data
Zhao, Chen, Liu, Anqi, Zhang, Xiao, Cao, Xuewei, Ding, Zhengming, Sha, Qiuying, Shen, Hui, Deng, Hong-Wen, Zhou, Weihua
Published in ArXiv.org (12.04.2023)
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Published in ArXiv.org (12.04.2023)
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A multi-omics study to investigate the progression of the Correa pathway in gastric mucosa in the context of cirrhosis
Ma, Ruiguang, Li, Qian, Yu, Guoxian, Wang, Jun, Li, Yueyue, Xu, Xinyan, Zhu, Yiqing, Dong, Min, Gao, Yanjing, Li, Lixiang, Li, Zhen
Published in Gut pathogens (26.09.2023)
Published in Gut pathogens (26.09.2023)
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CLCLSA: Cross-omics Linked embedding with Contrastive Learning and Self Attention for multi-omics integration with incomplete multi-omics data
Zhao, Chen, Liu, Anqi, Zhang, Xiao, Cao, Xuewei, Ding, Zhengming, Sha, Qiuying, Shen, Hui, Deng, Hong-Wen, Zhou, Weihua
Year of Publication 11.04.2023
Year of Publication 11.04.2023
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CLCLSA: Cross-omics Linked embedding with Contrastive Learning and Self Attention for multi-omics integration with incomplete multi-omics data
Chen, Zhao, Liu, Anqi, Zhang, Xiao, Cao, Xuewei, Ding, Zhengming, Sha, Qiuying, Shen, Hui, Hong-Wen, Deng, Zhou, Weihua
Published in arXiv.org (12.04.2023)
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Published in arXiv.org (12.04.2023)
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Integration of multi-omics datasets enables molecular classification of COPD
Li, Chuan-Xing, Wheelock, Craig E., Sköld, C. Magnus, Wheelock, Åsa M.
Published in The European respiratory journal (01.05.2018)
Published in The European respiratory journal (01.05.2018)
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MOUSSE: Multi-Omics Using Subject-Specific SignaturEs
Fiorentino, Giuseppe, Visintainer, Roberto, Domenici, Enrico, Lauria, Mario, Marchetti, Luca
Published in Cancers (08.07.2021)
Published in Cancers (08.07.2021)
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Antibiotics-Driven Gut Microbiome Perturbation Alters Immunity to Vaccines in Humans
Hagan, Thomas, Cortese, Mario, Rouphael, Nadine, Boudreau, Carolyn, Linde, Caitlin, Maddur, Mohan S., Das, Jishnu, Wang, Hong, Guthmiller, Jenna, Zheng, Nai-Ying, Huang, Min, Uphadhyay, Amit A., Gardinassi, Luiz, Petitdemange, Caroline, McCullough, Michele Paine, Johnson, Sara Jo, Gill, Kiran, Cervasi, Barbara, Zou, Jun, Bretin, Alexis, Hahn, Megan, Gewirtz, Andrew T., Bosinger, Steve E., Wilson, Patrick C., Li, Shuzhao, Alter, Galit, Khurana, Surender, Golding, Hana, Pulendran, Bali
Published in Cell (05.09.2019)
Published in Cell (05.09.2019)
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Predicting prognosis and immunotherapy response of ferroptosis-related genes in colorectal cancer
Wei, Hongyun, Ren, Keyu, Jin, Yanchun, Wen, Yao, Cao, Bin, Gan, Yu, Shi, Ying, Wu, Zhihong, Chen, Linlin
Published in European journal of medical research (23.06.2025)
Published in European journal of medical research (23.06.2025)
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