The PLETHORA Gene Regulatory Network Guides Growth and Cell Differentiation in Arabidopsis Roots
Santuari, Luca, Sanchez-Perez, Gabino F., Luijten, Marijn, Rutjens, Bas, Terpstra, Inez, Berke, Lidija, Gorte, Maartje, Prasad, Kalika, Bao, Dongping, Timmermans-Hereijgers, Johanna L.P.M., Maeo, Kenichiro, Nakamura, Kenzo, Shimotohno, Akie, Pencik, Ales, Novak, Ondrej, Ljung, Karin, van Heesch, Sebastiaan, de Bruijn, Ewart, Cuppen, Edwin, Willemsen, Viola, Mähönen, Ari Pekka, Lukowitz, Wolfgang, Snel, Berend, de Ridder, Dick, Scheres, Ben, Heidstra, Renze
Published in The Plant cell (01.12.2016)
Published in The Plant cell (01.12.2016)
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Journal Article
An analysis of characterized plant sesquiterpene synthases
Durairaj, Janani, Di Girolamo, Alice, Bouwmeester, Harro J., de Ridder, Dick, Beekwilder, Jules, van Dijk, Aalt DJ
Published in Phytochemistry (Oxford) (01.02.2019)
Published in Phytochemistry (Oxford) (01.02.2019)
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Journal Article
Efficient inference of homologs in large eukaryotic pan-proteomes
Sheikhizadeh Anari, Siavash, de Ridder, Dick, Schranz, M Eric, Smit, Sandra
Published in BMC bioinformatics (26.09.2018)
Published in BMC bioinformatics (26.09.2018)
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Journal Article
Prioritizing sequence variants in conserved non-coding elements in the chicken genome using chCADD
Groß, Christian, Bortoluzzi, Chiara, de Ridder, Dick, Megens, Hendrik-Jan, Groenen, Martien A. M, Reinders, Marcel, Bosse, Mirte, Barsh, Gregory S, Cooper, Gregory M
Published in PLoS genetics (23.09.2020)
Published in PLoS genetics (23.09.2020)
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Journal Article
Allelic variants confer Arabidopsis adaptation to small regional environmental differences
Wijfjes, Raúl Y., Boesten, René, Becker, Frank F. M., Theeuwen, Tom P. J. M., Snoek, Basten L., Mastoraki, Maria, Verheijen, Jelle J., Güvencli, Nuri, Denkers, Lissy‐Anne M., Koornneef, Maarten, Eeuwijk, Fred A., Smit, Sandra, Ridder, Dick, Aarts, Mark G. M.
Published in The Plant journal : for cell and molecular biology (01.11.2024)
Published in The Plant journal : for cell and molecular biology (01.11.2024)
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Journal Article
Genomic prediction in plants: opportunities for ensemble machine learning based approaches [version 2; peer review: 1 approved, 2 approved with reservations]
Farooq, Muhammad, van Dijk, Aalt D.J., Nijveen, Harm, Mansoor, Shahid, de Ridder, Dick
Published in F1000 research (2023)
Published in F1000 research (2023)
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Journal Article
Chasing breeding footprints through structural variations in Cucumis melo and wild relatives
Demirci, Sevgin, Fuentes, Roven Rommel, van Dooijeweert, Willem, Aflitos, Saulo, Schijlen, Elio, Hesselink, Thamara, de Ridder, Dick, van Dijk, Aalt D J, Peters, Sander
Published in G3 : genes - genomes - genetics (01.01.2021)
Published in G3 : genes - genomes - genetics (01.01.2021)
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Journal Article
A survey of functional genomic variation in domesticated chickens
Derks, Martijn F L, Megens, Hendrik-Jan, Bosse, Mirte, Visscher, Jeroen, Peeters, Katrijn, Bink, Marco C A M, Vereijken, Addie, Gross, Christian, de Ridder, Dick, Reinders, Marcel J T, Groenen, Martien A M
Published in Genetics selection evolution (Paris) (16.04.2018)
Published in Genetics selection evolution (Paris) (16.04.2018)
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Journal Article
Dysregulated signaling, proliferation and apoptosis impact on the pathogenesis of TCRγδ+ T cell large granular lymphocyte leukemia
Kallemeijn, Martine J, de Ridder, Dick, Schilperoord-Vermeulen, Joyce, van der Klift, Michèle Y, Sandberg, Yorick, van Dongen, Jacques J M, Langerak, Anton W
Published in PloS one (2017)
Published in PloS one (2017)
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Journal Article
Machine learning in plant science and plant breeding
van Dijk, Aalt Dirk Jan, Kootstra, Gert, Kruijer, Willem, de Ridder, Dick
Published in iScience (22.01.2021)
Published in iScience (22.01.2021)
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Journal Article
Shifts in growth strategies reflect tradeoffs in cellular economics
Molenaar, Douwe, van Berlo, Rogier, de Ridder, Dick, Teusink, Bas
Published in Molecular systems biology (2009)
Published in Molecular systems biology (2009)
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Journal Article
Hap10: reconstructing accurate and long polyploid haplotypes using linked reads
Majidian, Sina, Kahaei, Mohammad Hossein, de Ridder, Dick
Published in BMC bioinformatics (18.06.2020)
Published in BMC bioinformatics (18.06.2020)
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Journal Article
Genome Sequences of Cyberlindnera fabianii 65, Pichia kudriavzevii 129, and Saccharomyces cerevisiae 131 Isolated from Fermented Masau Fruits in Zimbabwe
van Rijswijck, Irma M H, Derks, Martijn F L, Abee, Tjakko, de Ridder, Dick, Smid, Eddy J
Published in Genome announcements (Washington, DC) (06.04.2017)
Published in Genome announcements (Washington, DC) (06.04.2017)
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