Scarless excision of an insertion sequence restores capsule production and virulence in Acinetobacter baumannii
Whiteway, Clémence, Valcek, Adam, Philippe, Chantal, Strazisar, Mojca, De Pooter, Tim, Mateus, Ivan, Breine, Anke, Van der Henst, Charles
Published in The ISME Journal (01.05.2022)
Published in The ISME Journal (01.05.2022)
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NanoSatellite: accurate characterization of expanded tandem repeat length and sequence through whole genome long-read sequencing on PromethION
De Roeck, Arne, De Coster, Wouter, Bossaerts, Liene, Cacace, Rita, De Pooter, Tim, Van Dongen, Jasper, D'Hert, Svenn, De Rijk, Peter, Strazisar, Mojca, Van Broeckhoven, Christine, Sleegers, Kristel
Published in Genome Biology (14.11.2019)
Published in Genome Biology (14.11.2019)
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Mitochondrial GpC and CpG DNA Hypermethylation Cause Metabolic Stress-Induced Mitophagy and Cholestophagy
Theys, Claudia, Ibrahim, Joe, Mateiu, Ligia, Mposhi, Archibold, García-Pupo, Laura, De Pooter, Tim, De Rijk, Peter, Strazisar, Mojca, İnce, İkbal Agah, Vintea, Iuliana, Rots, Marianne G, Vanden Berghe, Wim
Published in International journal of molecular sciences (01.11.2023)
Published in International journal of molecular sciences (01.11.2023)
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Rare variants in IFFO1, DTNB, NLRC3 and SLC22A10 associate with Alzheimer's disease CSF profile of neuronal injury and inflammation
Neumann, Alexander, Küçükali, Fahri, Bos, Isabelle, Vos, Stephanie J B, Engelborghs, Sebastiaan, De Pooter, Tim, Joris, Geert, De Rijk, Peter, De Roeck, Ellen, Tsolaki, Magda, Verhey, Frans, Martinez-Lage, Pablo, Tainta, Mikel, Frisoni, Giovanni, Blin, Oliver, Richardson, Jill, Bordet, Régis, Scheltens, Philip, Popp, Julius, Peyratout, Gwendoline, Johannsen, Peter, Frölich, Lutz, Vandenberghe, Rik, Freund-Levi, Yvonne, Streffer, Johannes, Lovestone, Simon, Legido-Quigley, Cristina, Ten Kate, Mara, Barkhof, Frederik, Strazisar, Mojca, Zetterberg, Henrik, Bertram, Lars, Visser, Pieter Jelle, van Broeckhoven, Christine, Sleegers, Kristel
Published in Molecular psychiatry (01.04.2022)
Published in Molecular psychiatry (01.04.2022)
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Increased prime edit rates in KCNQ2 and SCN1A via single nicking all-in-one plasmids
Dirkx, N, Weuring, Wout J, De Vriendt, E, Smal, N, van de Vondervoort, J, van 't Slot, Ruben, Koetsier, M, Zonnekein, N, De Pooter, Tim, Weckhuysen, S, Koeleman, B P C
Published in BMC biology (13.07.2023)
Published in BMC biology (13.07.2023)
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Journal Article
Phenotypic Characterization and Heterogeneity among Modern Clinical Isolates of Acinetobacter baumannii
Valcek, Adam, Philippe, Chantal, Whiteway, Clémence, Robino, Etienne, Nesporova, Kristina, Bové, Mona, Coenye, Tom, De Pooter, Tim, De Coster, Wouter, Strazisar, Mojca, Van der Henst, Charles
Published in Microbiology spectrum (14.02.2023)
Published in Microbiology spectrum (14.02.2023)
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Journal Article
Alzheimer and Parkinson Diagnoses in Progranulin Null Mutation Carriers in an Extended Founder Family
Brouwers, Nathalie, Nuytemans, Karen, van der Zee, Julie, Gijselinck, Ilse, Engelborghs, Sebastiaan, Theuns, Jessie, Kumar-Singh, Samir, Pickut, Barbara A, Pals, Philippe, Dermaut, Bart, Bogaerts, Veerle, De Pooter, Tim, Serneels, Sally, Van den Broeck, Marleen, Cuijt, Ivy, Mattheijssens, Maria, Peeters, Karin, Sciot, Raf, Martin, Jean-Jacques, Cras, Patrick, Santens, Patrick, Vandenberghe, Rik, De Deyn, Peter P, Cruts, Marc, Van Broeckhoven, Christine, Sleegers, Kristel
Published in Archives of neurology (Chicago) (01.10.2007)
Published in Archives of neurology (Chicago) (01.10.2007)
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Journal Article
Promoter Mutations That Increase Amyloid Precursor-Protein Expression Are Associated with Alzheimer Disease
Theuns, Jessie, Brouwers, Nathalie, Engelborghs, Sebastiaan, Sleegers, Kristel, Bogaerts, Veerle, Corsmit, Ellen, De Pooter, Tim, van Duijn, Cornelia M., De Deyn, Peter P., Van Broeckhoven, Christine
Published in American journal of human genetics (01.06.2006)
Published in American journal of human genetics (01.06.2006)
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Journal Article
Mitochondrial DNA methylation in metabolic associated fatty liver disease
Mposhi, Archibold, Cortés-Mancera, Fabian, Heegsma, Janette, de Meijer, Vincent E, van de Sluis, Bart, Sydor, Svenja, Bechmann, Lars P, Theys, Claudia, de Rijk, Peter, De Pooter, Tim, Vanden Berghe, Wim, İnce, İkbal Agah, Faber, Klaas Nico, Rots, Marianne G
Published in Frontiers in nutrition (Lausanne) (25.05.2023)
Published in Frontiers in nutrition (Lausanne) (25.05.2023)
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Journal Article
Long-Read Sequencing to Unravel Complex Structural Variants of CEP78 Leading to Cone-Rod Dystrophy and Hearing Loss
Ascari, Giulia, Rendtorff, Nanna D, De Bruyne, Marieke, De Zaeytijd, Julie, Van Lint, Michel, Bauwens, Miriam, Van Heetvelde, Mattias, Arno, Gavin, Jacob, Julie, Creytens, David, Van Dorpe, Jo, Van Laethem, Thalia, Rosseel, Toon, De Pooter, Tim, De Rijk, Peter, De Coster, Wouter, Menten, Björn, Rey, Alfredo Dueñas, Strazisar, Mojca, Bertelsen, Mette, Tranebjaerg, Lisbeth, De Baere, Elfride
Published in Frontiers in cell and developmental biology (21.04.2021)
Published in Frontiers in cell and developmental biology (21.04.2021)
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Journal Article
Mutations other than null mutations producing a pathogenic loss of progranulin in frontotemporal dementia
van der Zee, Julie, Le Ber, Isabelle, Maurer-Stroh, Sebastian, Engelborghs, Sebastiaan, Gijselinck, Ilse, Camuzat, Agnès, Brouwers, Nathalie, Vandenberghe, Rik, Sleegers, Kristel, Hannequin, Didier, Dermaut, Bart, Schymkowitz, Joost, Campion, Dominique, Santens, Patrick, Martin, Jean-Jacques, Lacomblez, Lucette, De Pooter, Tim, Peeters, Karin, Mattheijssens, Maria, Vercelletto, Martine, Van den Broeck, Marleen, Cruts, Marc, De Deyn, Peter P., Rousseau, Frederic, Brice, Alexis, Van Broeckhoven, Christine
Published in Human mutation (01.04.2007)
Published in Human mutation (01.04.2007)
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Linkage and Association Studies Identify a Novel Locus for Alzheimer Disease at 7q36 in a Dutch Population-Based Sample
Rademakers, Rosa, Cruts, Marc, Sleegers, Kristel, Dermaut, Bart, Theuns, Jessie, Aulchenko, Yurii, Weckx, Stefan, De Pooter, Tim, Van den Broeck, Marleen, Corsmit, Ellen, De Rijk, Peter, Del-Favero, Jurgen, van Swieten, John, van Duijn, Cornelia M., Van Broeckhoven, Christine
Published in American journal of human genetics (01.10.2005)
Published in American journal of human genetics (01.10.2005)
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Genomic Analysis of a Strain Collection Containing Multidrug-, Extensively Drug-, Pandrug-, and Carbapenem-Resistant Modern Clinical Isolates of Acinetobacter baumannii
Valcek, Adam, Nesporova, Kristina, Whiteway, Clémence, De Pooter, Tim, De Coster, Wouter, Strazisar, Mojca, Van der Henst, Charles
Published in Antimicrobial agents and chemotherapy (20.09.2022)
Published in Antimicrobial agents and chemotherapy (20.09.2022)
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Suppression of the Arabidopsis cinnamoyl-CoA reductase 1-6 intronic T-DNA mutation by epigenetic modification
Wouters, Marlies, Bastiaanse, Héloïse, Rombauts, Stephane, de Vries, Lisanne, De Pooter, Tim, Strazisar, Mojca, Neutelings, Godfrey, Vanholme, Ruben, Boerjan, Wout
Published in Plant physiology (Bethesda) (03.08.2023)
Published in Plant physiology (Bethesda) (03.08.2023)
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Journal Article
Null mutations in progranulin cause ubiquitin-positive frontotemporal dementia linked to chromosome 17q21
Van Broeckhoven, Christine, Cruts, Marc, Gijselinck, Ilse, van der Zee, Julie, Engelborghs, Sebastiaan, Wils, Hans, Pirici, Daniel, Rademakers, Rosa, Vandenberghe, Rik, Dermaut, Bart, Martin, Jean-Jacques, van Duijn, Cornelia, Peeters, Karin, Sciot, Raf, Santens, Patrick, De Pooter, Tim, Mattheijssens, Maria, Van den Broeck, Marleen, Cuijt, Ivy, Vennekens, Krist'l, De Deyn, Peter P, Kumar-Singh, Samir
Published in Nature (24.08.2006)
Published in Nature (24.08.2006)
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Journal Article
Scywalker: Scalable end-to-end data analysis workflow for long-read single-cell transcriptome sequencing
De Rijk, Peter, Watzeels, Tijs, Küçükali, Fahri, Van Dongen, Jasper, Faura, Júlia, Willems, Patrick, De Deyn, Lara, Duchateau, Lena, Grones, Carolin, Eekhout, Thomas, De Pooter, Tim, Joris, Geert, Rombauts, Stephane, De Rybel, Bert, Rademakers, Rosa, Van Breusegem, Frank, Strazisar, Mojca, Sleegers, Kristel, De Coster, Wouter
Published in Bioinformatics (Oxford, England) (10.09.2024)
Published in Bioinformatics (Oxford, England) (10.09.2024)
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Journal Article
Accurate characterization of expanded tandem repeat length and sequence through whole genome long-read sequencing on PromethION
De Roeck, Arne, De Coster, Wouter, Bossaerts, Liene, Cacace, Rita, De Pooter, Tim, Jasper Van Dongen, D'hert, Svenn, De Rijk, Peter, Strazisar, Mojca, Christine Van Broeckhoven, Sleegers, Kristel
Published in bioRxiv (15.11.2018)
Published in bioRxiv (15.11.2018)
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Paper
Loss of DPP6 in neurodegenerative dementia: a genetic player in the dysfunction of neuronal excitability
Cacace, Rita, Heeman, Bavo, Van Mossevelde, Sara, De Roeck, Arne, Hoogmartens, Julie, De Rijk, Peter, Gossye, Helena, De Vos, Kristof, De Coster, Wouter, Strazisar, Mojca, De Baets, Greet, Schymkowitz, Joost, Rousseau, Frederic, Geerts, Nathalie, De Pooter, Tim, Peeters, Karin, Sieben, Anne, Martin, Jean-Jacques, Engelborghs, Sebastiaan, Salmon, Eric, Santens, Patrick, Vandenberghe, Rik, Cras, Patrick, P. De Deyn, Peter, C. van Swieten, John, M. van Duijn, Cornelia, van der Zee, Julie, Sleegers, Kristel, Van Broeckhoven, Christine
Published in Acta neuropathologica (01.06.2019)
Published in Acta neuropathologica (01.06.2019)
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Journal Article
Whole‐exome rare‐variant analysis of Alzheimer's disease and related biomarker traits
Küçükali, Fahri, Neumann, Alexander, Van Dongen, Jasper, De Pooter, Tim, Joris, Geert, De Rijk, Peter, Ohlei, Olena, Dobricic, Valerija, Bos, Isabelle, Vos, Stephanie J. B., Engelborghs, Sebastiaan, De Roeck, Ellen, Vandenberghe, Rik, Gabel, Silvy, Meersmans, Karen, Tsolaki, Magda, Verhey, Frans, Martinez‐Lage, Pablo, Tainta, Mikel, Frisoni, Giovanni, Blin, Oliver, Richardson, Jill C, Bordet, Régis, Scheltens, Philip, Popp, Julius, Peyratout, Gwendoline, Johannsen, Peter, Frölich, Lutz, Freund‐Levi, Yvonne, Streffer, Johannes, Lovestone, Simon, Legido‐Quigley, Cristina, Kate, Mara ten, Barkhof, Frederik, Zetterberg, Henrik, Bertram, Lars, Strazisar, Mojca, Visser, Pieter Jelle, Van Broeckhoven, Christine, Sleegers, Kristel
Published in Alzheimer's & dementia (01.06.2023)
Published in Alzheimer's & dementia (01.06.2023)
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CHMP2B C-truncating mutations in frontotemporal lobar degeneration are associated with an aberrant endosomal phenotype in vitro
van der Zee, Julie, Urwin, Hazel, Engelborghs, Sebastiaan, Bruyland, Marc, Vandenberghe, Rik, Dermaut, Bart, De Pooter, Tim, Peeters, Karin, Santens, Patrick, De Deyn, Peter P., Fisher, Elizabeth M., Collinge, John, Isaacs, Adrian M., Van Broeckhoven, Christine
Published in Human molecular genetics (15.01.2008)
Published in Human molecular genetics (15.01.2008)
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