A simplified approach using Taqman low-density array for medulloblastoma subgrouping
Cruzeiro, Gustavo Alencastro Veiga, Salomão, Karina Bezerra, de Biagi, Jr, Carlos Alberto Oliveira, Baumgartner, Martin, Sturm, Dominik, Lira, Régia Caroline Peixoto, de Almeida Magalhães, Taciani, Baroni Milan, Mirella, da Silva Silveira, Vanessa, Saggioro, Fabiano Pinto, de Oliveira, Ricardo Santos, Dos Santos Klinger, Paulo Henrique, Seidinger, Ana Luiza, Yunes, José Andrés, de Paula Queiroz, Rosane Gomes, Oba-Shinjo, Sueli Mieko, Scrideli, Carlos Alberto, Nagahashi, Suely Marie Kazue, Tone, Luiz Gonzaga, Valera, Elvis Terci
Published in Acta neuropathologica communications (04.03.2019)
Published in Acta neuropathologica communications (04.03.2019)
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Whole transcriptome analysis reveals correlation of long noncoding RNA ZEB1-AS1 with invasive profile in melanoma
Siena, Ádamo Davi Diógenes, Plaça, Jéssica Rodrigues, Araújo, Luiza Ferreira, de Barros, Isabela Ichihara, Peronni, Kamila, Molfetta, Greice, de Biagi, Carlos Alberto Oliveira, Espreafico, Enilza Maria, Sousa, Josane Freitas, Silva, Wilson Araújo
Published in Scientific reports (05.08.2019)
Published in Scientific reports (05.08.2019)
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CeTF: an R/Bioconductor package for transcription factor co-expression networks using regulatory impact factors (RIF) and partial correlation and information (PCIT) analysis
Oliveira de Biagi, Carlos Alberto, Nociti, Ricardo Perecin, Brotto, Danielle Barbosa, Funicheli, Breno Osvaldo, Cássia Ruy, Patrícia de, Bianchi Ximenez, João Paulo, Alves Figueiredo, David Livingstone, Araújo Silva, Wilson
Published in BMC genomics (20.08.2021)
Published in BMC genomics (20.08.2021)
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Journal Article
Diffuse midline glioma invasion and metastasis rely on cell-autonomous signaling
Bruschi, Marco, Midjek, Lilia, Ajlil, Yassine, Vairy, Stephanie, Lancien, Manon, Ghermaoui, Samia, Kergrohen, Thomas, Verreault, Maite, Idbaih, Ahmed, de Biagi, Carlos Alberto Oliveira, Liu, Ilon, Filbin, Mariella G, Beccaria, Kevin, Blauwblomme, Thomas, Puget, Stephanie, Tauziede-Espariat, Arnault, Varlet, Pascale, Dangouloff-Ros, Volodia, Boddaert, Nathalie, Le Teuff, Gwenael, Grill, Jacques, Montagnac, Guillaume, Elkhatib, Nadia, Debily, Marie-Anne, Castel, David
Published in Neuro-oncology (Charlottesville, Va.) (01.03.2024)
Published in Neuro-oncology (Charlottesville, Va.) (01.03.2024)
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Microbiome and oral squamous cell carcinoma: a possible interplay on iron metabolism and its impact on tumor microenvironment
Arthur, Rodrigo Alex, dos Santos Bezerra, Rafael, Ximenez, João Paulo Bianchi, Merlin, Bruna Laís, de Andrade Morraye, Raphael, Neto, João Valentini, Fava, Natália Melo Nasser, Figueiredo, David Livingstone Alves, de Biagi, Carlos Alberto Oliveira, Montibeller, Maria Jara, Guimarães, Jhefferson Barbosa, Alves, Ellen Gomes, Schreiner, Monique, da Costa, Tiago Silva, da Silva, Charlie Felipe Liberati, Malheiros, Jessica Moraes, da Silva, Luan Henrique Burda, Ribas, Guilherme Taborda, Achallma, Daisy Obispo, Braga, Camila Margalho, Andrade, Karen Flaviane Assis, do Carmo Alves Martins, Valquiria, dos Santos, Glauco Vinícius Nestor, Granatto, Caroline Fabiane, Terin, Ulisses Costa, Sanches, Igor Henrique, Ramos, Diana Estefania, Garay-Malpartida, Humberto Miguel, de Souza, Gabriela Marcelino Pereira, Slavov, Svetoslav Nanev, Silva, Wilson Araújo
Published in Brazilian journal of microbiology (01.09.2021)
Published in Brazilian journal of microbiology (01.09.2021)
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RANKL Impairs the TLR4 Pathway by Increasing TRAF6 and RANK Interaction in Macrophages
Mota, Ryerson Fonseca, Cavalcanti de Araújo, Paulo Henrique, Cezine, Maria Eduarda Ramos, Matsuo, Flávia Sayuri, Metzner, Rodrigo Jair Morandi, Oliveira de Biagi Junior, Carlos Alberto, Peronni, Kamila Chagas, Hayashi, Hiroki, Shimamura, Munehisa, Nakagami, Hironori, Osako, Mariana Kiomy
Published in BioMed research international (12.04.2022)
Published in BioMed research international (12.04.2022)
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Upregulation of the novel lncRNA U731166 is associated with migration, invasion and vemurafenib resistance in melanoma
Siena, Ádamo Davi Diógenes, Barros, Isabela Ichihara de, Storti, Camila Baldin, de Biagi Júnior, Carlos Alberto Oliveira, da Costa Carvalho, Larissa Anastacio, Maria‐Engler, Silvya Stuchi, Sousa, Josane de Freitas, Silva, Wilson Araújo
Published in Journal of cellular and molecular medicine (01.02.2022)
Published in Journal of cellular and molecular medicine (01.02.2022)
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Ultraconserved long non-coding RNA uc.112 is highly expressed in childhood T versus B-cell acute lymphoblastic leukemia
das Chagas, Pablo Ferreira, de Sousa, Graziella Ribeiro, Kodama, Márcio Hideki, de Biagi Junior, Carlos Alberto Oliveira, Yunes, José Andres, Brandalise, Silvia Regina, Calin, George Adrian, Tone, Luiz Gonzaga, Scrideli, Carlos Alberto, de Oliveira, Jaqueline Carvalho
Published in Hematology, Transfusion and Cell Therapy (01.01.2021)
Published in Hematology, Transfusion and Cell Therapy (01.01.2021)
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Lipopolysaccharide triggers different transcriptional signatures in taurine and indicine cattle macrophages: Reactive oxygen species and potential outcomes to the development of immune response to infections
Daibert, Raquel Morais de Paiva, de Biagi Junior, Carlos Alberto Oliveira, Vieira, Felipe de Oliveira, da Silva, Marcos Vinicius Gualberto Barbosa, Hottz, Eugenio Damaceno, Mendonça Pinheiro, Mariana Brandi, Faza, Daniele Ribeiro de Lima Reis, Pereira, Hyago Passe, Martins, Marta Fonseca, Brandão, Humberto de Mello, Machado, Marco Antônio, Carvalho, Wanessa Araújo
Published in PloS one (06.11.2020)
Published in PloS one (06.11.2020)
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YAP1 Is a Potential Predictive Molecular Biomarker for Response to SMO Inhibitor in Medulloblastoma Cells
Alencastro Veiga Cruzeiro, Gustavo, de Almeida Magalhães, Taciani, Ribeiro de Sousa, Graziella, Bonfim Silva, Ricardo, Alberto Oliveira de Biagi Junior, Carlos, Ferreira das Chagas, Pablo, Gomes de Paula Queiroz, Rosane, Alberto Scrideli, Carlos, Gonzaga Tone, Luiz, Terci Valera, Elvis
Published in Cancers (13.12.2021)
Published in Cancers (13.12.2021)
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Transcriptomic studies on Purpureocillium lilacinum reveal molecular mechanisms of response to fluconazole and itraconazole
Pedezzi, Rafael, de Biagi Junior, Carlos Alberto Oliveira, de Freitas, Marcela Cristina Corrêa, da Rosa-Garzon, Nathália Gonsales, Cabral, Hamilton
Published in Brazilian journal of microbiology (01.06.2021)
Published in Brazilian journal of microbiology (01.06.2021)
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Journal Article
CeTF: an R/Bioconductor package for transcription factor co-expression networks using regulatory impact factors analysis
Oliveira de Biagi, Carlos Alberto, Nociti, Ricardo Perecin, Brotto, Danielle Barbosa, Funicheli, Breno Osvaldo, Cássia Ruy, Patrícia de, Bianchi Ximenez, João Paulo, Alves Figueiredo, David Livingstone, Araújo Silva, Wilson
Published in BMC genomics (20.08.2021)
Published in BMC genomics (20.08.2021)
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Elevated Glucose Levels Favor SARS-CoV-2 Infection and Monocyte Response through a HIF-1α/Glycolysis-Dependent Axis
Codo, Ana Campos, Davanzo, Gustavo Gastão, Monteiro, Lauar de Brito, de Souza, Gabriela Fabiano, Muraro, Stéfanie Primon, Virgilio-da-Silva, João Victor, Prodonoff, Juliana Silveira, Carregari, Victor Corasolla, de Biagi Junior, Carlos Alberto Oliveira, Crunfli, Fernanda, Jimenez Restrepo, Jeffersson Leandro, Vendramini, Pedro Henrique, Reis-de-Oliveira, Guilherme, Bispo dos Santos, Karina, Toledo-Teixeira, Daniel A., Parise, Pierina Lorencini, Martini, Matheus Cavalheiro, Marques, Rafael Elias, Carmo, Helison R., Borin, Alexandre, Coimbra, Laís Durço, Boldrini, Vinícius O., Brunetti, Natalia S., Vieira, Andre S., Mansour, Eli, Ulaf, Raisa G., Bernardes, Ana F., Nunes, Thyago A., Ribeiro, Luciana C., Palma, Andre C., Agrela, Marcus V., Moretti, Maria Luiza, Sposito, Andrei C., Pereira, Fabrício Bíscaro, Velloso, Licio Augusto, Vinolo, Marco Aurélio Ramirez, Damasio, André, Proença-Módena, José Luiz, Carvalho, Robson Francisco, Mori, Marcelo A., Martins-de-Souza, Daniel, Nakaya, Helder I., Farias, Alessandro S., Moraes-Vieira, Pedro M.
Published in Cell Metabolism (01.09.2020)
Published in Cell Metabolism (01.09.2020)
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Elevated Glucose Levels Favor SARS-CoV-2 Infection and Monocyte Response through a HIF-1α/Glycolysis-Dependent Axis
Codo, Ana Campos, Davanzo, Gustavo Gastão, Monteiro, Lauar de Brito, de Souza, Gabriela Fabiano, Muraro, Stéfanie Primon, Virgilio-da-Silva, João Victor, Prodonoff, Juliana Silveira, Carregari, Victor Corasolla, de Biagi Junior, Carlos Alberto Oliveira, Crunfli, Fernanda, Jimenez Restrepo, Jeffersson Leandro, Vendramini, Pedro Henrique, Reis-de-Oliveira, Guilherme, Bispo dos Santos, Karina, Toledo-Teixeira, Daniel A., Parise, Pierina Lorencini, Martini, Matheus Cavalheiro, Marques, Rafael Elias, Carmo, Helison R., Borin, Alexandre, Coimbra, Laís Durço, Boldrini, Vinícius O., Brunetti, Natalia S., Vieira, Andre S., Mansour, Eli, Ulaf, Raisa G., Bernardes, Ana F., Nunes, Thyago A., Ribeiro, Luciana C., Palma, Andre C., Agrela, Marcus V., Moretti, Maria Luiza, Sposito, Andrei C., Pereira, Fabrício Bíscaro, Velloso, Licio Augusto, Vinolo, Marco Aurélio Ramirez, Damasio, André, Proença-Módena, José Luiz, Carvalho, Robson Francisco, Mori, Marcelo A., Martins-de-Souza, Daniel, Nakaya, Helder I., Farias, Alessandro S., Moraes-Vieira, Pedro M.
Published in Cell metabolism (01.09.2020)
Published in Cell metabolism (01.09.2020)
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Abstract 154: Diffuse midline glioma invasion and metastasis rely on cell-autonomous signaling through a phenotypic switch controlled by BMP7
Bruschi, Marco, Midjek, Lilia, Ajlil, Yassine, Vairy, Stephanie, Lancien, Manon, Ghermaoui, Samia, Kergrohen, Thomas, Verreault, Maite, Idbaih, Ahmed, de Biagi, Carlos Alberto Oliveira, Liu, Ilon, Filbin, Mariella G., Beccaria, Kevin, Blauwblomme, Thomas, Puget, Stephanie, Tauziede-Espariat, Arnault, Varlet, Pascale, Dangouloff-Ros, Volodia, Boddaert, Nathalie, Le Teuff, Gwenael, Grill, Jacques, Montagnac, Guillaume, Elkathib, Nadia, Debily, Marie-Anne, Castel, David
Published in Cancer research (Chicago, Ill.) (22.03.2024)
Published in Cancer research (Chicago, Ill.) (22.03.2024)
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Multidimensional Single-Nuclei RNA-Seq Reconstruction of Adipose Tissue Reveals Adipocyte Plasticity Underlying Thermogenic Response
Biagi, Jr, Carlos Alberto Oliveira, Cury, Sarah Santiloni, Alves, Cleidson Pádua, Rabhi, Nabil, Silva, Jr, Wilson Araujo, Farmer, Stephen R, Carvalho, Robson Francisco, Batista, Jr, Miguel Luiz
Published in Cells (Basel, Switzerland) (08.11.2021)
Published in Cells (Basel, Switzerland) (08.11.2021)
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STEM-11. MULTIDIMENSIONAL PROFILING OF TUMOR CELL HETEROGENEITY REVEALS CELL-LINEAGE SPECIFIC FUNCTIONS IN SUPRATENTORIAL EPENDYMOMAS
Jeong, Daeun, Danielli, Sara G, Maaß, Kendra, Ghasemi, David R, Tetzlaff, Svenja K, Reyhan, Ekin, de Biagi-Junior, Carlos Alberto Oliveira, Cascio, Costanza Lo, Neyazi, Sina, Nascimento, Andrezza, Haase, Rebecca, Englinger, Bernhard, Jiang, Li, Nguyen, Cuong M, Baumgartner, Alicia-Christina, Castellani, Sophia, Rozowsky, Jacob S, Hack, Olivia A, Shaw, McKenzie L, Lotsch-Gojo, Daniela, Bruckner, Katharina, Pfister, Stefan M, Kool, Marcel, Nowakowski, Tomasz, Gojo, Johannes, Baird, Lissa, Alexandrescu, Sanda, Pajtler, Kristian W, Venkataramani, Varun, Filbin, Mariella G
Published in Neuro-oncology (Charlottesville, Va.) (11.11.2024)
Published in Neuro-oncology (Charlottesville, Va.) (11.11.2024)
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Multidimensional Single-Nuclei RNA-Seq Reconstruction of Adipose Tissue Reveals Adipocyte Plasticity Underlying Thermogenic Response
Carlos Alberto Oliveira De Biagi Junior, Cury, Sarah Santiloni, Cleidson De Pádua Alves, Rabhi, Nabil, Silva, Wilson Araujo, Farmer, Stephen R, Robson, Francisco Carvalho, Batista, Miguel Luiz
Published in bioRxiv (27.02.2021)
Published in bioRxiv (27.02.2021)
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CeTF: an R package to Coexpression for Transcription Factors using Regulatory Impact Factors (RIF) and Partial Correlation and Information (PCIT) analysis
Carlos Alberto Oliveira De Biagi Junior, Ricardo Perecin Nociti, Breno Osvaldo Funicheli, Patricia De Cassia Ruy, Joao Paulo Bianchi Ximenez, Silva, Wilson A
Published in bioRxiv (01.04.2020)
Published in bioRxiv (01.04.2020)
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