Genomic blueprints of sponge-prokaryote symbiosis are shared by low abundant and cultivatable Alphaproteobacteria
Karimi, Elham, Keller-Costa, Tina, Slaby, Beate M., Cox, Cymon J., da Rocha, Ulisses N., Hentschel, Ute, Costa, Rodrigo
Published in Scientific reports (13.02.2019)
Published in Scientific reports (13.02.2019)
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BioPrediction-RPI: Democratizing the prediction of interaction between non-coding RNA and protein with end-to-end machine learning
Florentino, Bruno Rafael, Parmezan Bonidia, Robson, Sanches, Natan Henrique, da Rocha, Ulisses N., de Carvalho, André C.P.L.F.
Published in Computational and structural biotechnology journal (01.12.2024)
Published in Computational and structural biotechnology journal (01.12.2024)
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Corrigendum to “BioPrediction-RPI: Democratizing the prediction of interaction between non-coding RNA and protein with end-to-end machine learning” [Comput Struct Biotechnol J, vol. 23, pp 2267-2276]
Florentino, Bruno Rafael, Bonidia, Robson Parmezan, Sanches, Natan Henrique, da Rocha, Ulisses N., de Carvalho, André C.P.L.F.
Published in Computational and structural biotechnology journal (01.12.2024)
Published in Computational and structural biotechnology journal (01.12.2024)
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Structure and functional capacity of a benzene‐mineralizing, nitrate‐reducing microbial community
Eziuzor, Samuel C., Corrêa, Felipe B., Peng, Shuchan, Schultz, Júnia, Kleinsteuber, Sabine, Rocha, Ulisses N., Adrian, Lorenz, Vogt, Carsten
Published in Journal of applied microbiology (01.04.2022)
Published in Journal of applied microbiology (01.04.2022)
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BioAutoML: automated feature engineering and metalearning to predict noncoding RNAs in bacteria
Bonidia, Robson P, Santos, Anderson P Avila, de Almeida, Breno L S, Stadler, Peter F, da Rocha, Ulisses N, Sanches, Danilo S, de Carvalho, André C P L F
Published in Briefings in bioinformatics (18.07.2022)
Published in Briefings in bioinformatics (18.07.2022)
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Characterization of putative circular plasmids in sponge‐associated bacterial communities using a selective multiply‐primed rolling circle amplification
Oliveira, Vanessa, Polónia, Ana R. M., Cleary, Daniel F. R., Huang, Yusheng M., Voogd, Nicole J., Rocha, Ulisses N., Gomes, Newton C. M.
Published in Molecular ecology resources (01.01.2021)
Published in Molecular ecology resources (01.01.2021)
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Corrigendum to "BioPrediction-RPI: Democratizing the prediction of interaction between non-coding RNA and protein with end-to-end machine learning" Comput Struct Biotechnol J, vol. 23, pp 2267-2276
Florentino, Bruno Rafael, Bonidia, Robson Parmezan, Sanches, Natan Henrique, da Rocha, Ulisses N, de Carvalho, André C P L F
Published in Computational and structural biotechnology journal (01.12.2024)
Published in Computational and structural biotechnology journal (01.12.2024)
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