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The transcriptome of HTLV-1-infected primary cells following reactivation reveals changes to host gene expression central to the proviral life cycle
Aristodemou, Aris E. N., Rueda, David S., Taylor, Graham P., Bangham, Charles R. M.
Published in PLoS pathogens (01.07.2023)
Published in PLoS pathogens (01.07.2023)
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Spatially distinct molecular patterns of gene expression in idiopathic pulmonary fibrosis
Blumhagen, Rachel Z., Kurche, Jonathan S., Cool, Carlyne D., Walts, Avram D., Heinz, David, Fingerlin, Tasha E., Yang, Ivana V., Schwartz, David A.
Published in Respiratory research (17.11.2023)
Published in Respiratory research (17.11.2023)
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GPseudoClust: deconvolution of shared pseudo-profiles at single-cell resolution
Strauss, Magdalena E, Kirk, Paul D W, Reid, John E, Wernisch, Lorenz
Published in Bioinformatics (01.03.2020)
Published in Bioinformatics (01.03.2020)
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Analysis of Multiplexed Flow Cytometric Assays and Toxicogenomic Signatures for Genotoxicity Prediction: A Model Performance and Case Study Approach
Lagunas, Tomás, Melnikov, Fjodor, Cole, Gabby, Niu, Steve, Esparza, Estefania, Davies, John, Hasselgren, Catrin, Fullerton, Aaron, Zhong, Yu
Published in Environmental and molecular mutagenesis (22.07.2025)
Published in Environmental and molecular mutagenesis (22.07.2025)
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Abstract 10241: Single-Cell RNA-Sequencing Reveals Hyperacute NK Cell and Monocyte Cell States Correlating with Poor Neurological Outcomes After Cardiac Arrest
Tamura, Tomoyoshi, Cheng, Changde, Weissman, Alexandra, Pinilla-Vera, Mayra, Merriam, Louis, Varon, Jack, Saliba, Sam, Hou, Peter, Seethala, Raghu, Lawler, Patrick R, Oldham, William M, Choi, Jiyoung, Ikeda, Kohei, Hayashida, Kei, Tesfaigzi, Yohannes, Berg, Katherine, Bohula, Erin, Morrow, David, Baron, Rebecca, Donnino, Michael, Ichinose, Fumito, Chen, Xiang, Kim, Edy
Published in Circulation (New York, N.Y.) (16.11.2021)
Published in Circulation (New York, N.Y.) (16.11.2021)
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LOXHD1 and RHOB Expression by Monocytes Predicts Progressive Systemic Sclerosis associated Interstitial Lung Disease
Padilla, Cristina M, Lafyatis, Robert, Gibson, Kevin F, Morse, Christina, Valenzi, Eleanor, Chen, Xiaoping, Li, Xiaoyun, Zhao, Yanwu, Park, Yongseok, Ascherman, Dana, Minden, Jonathan, Domsic, Robyn, Zhang, Yingze, Kass, Daniel J
Published in Arthritis care & research (2010) (07.08.2025)
Published in Arthritis care & research (2010) (07.08.2025)
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Prognostic-related genes for pancreatic cancer typing and immunotherapy response prediction based on single-cell sequencing data and bulk sequencing data
WANG, XUEFENG, JIANG, SICONG, ZHOU, XINHONG, WANG, XIAOFENG, LI, LAN, TANG, JIANJUN
Published in Oncology research (01.01.2023)
Published in Oncology research (01.01.2023)
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Bulk brain tissue cell type deconvolution with bias correction for single‐nuclei RNA‐seq
O'Neill, Nicholas K, Hu, Junming, Stein, Thor D., Zhang, Xiaoling, Farrer, Lindsay A.
Published in Alzheimer's & dementia (01.12.2022)
Published in Alzheimer's & dementia (01.12.2022)
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T96. DELTA-9-TETRAHYDROCANNABINOL MODULATES IMMUNOGENOMIC FUNCTION AT SINGLE CELL RESOLUTION USING 10X MULTIOME PROFILING: IN VIVO HUMAN SUBJECT STUDY
Xu, Ke, D'Souza, Deepak Cyril, Ranganathan, Mohini, Xu, Ying, Li, Mingrui
Published in European neuropsychopharmacology (01.10.2024)
Published in European neuropsychopharmacology (01.10.2024)
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Hormonal stimulation reduces numbers and impairs function of human uterine natural killer cells during implantation
Kanter, J, Gordon, S M, Mani, S, Sokalska, A, Park, J Y, Senapati, S, Huh, D D, Mainigi, M
Published in Human reproduction (Oxford) (01.06.2023)
Published in Human reproduction (Oxford) (01.06.2023)
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Transcriptomic analysis of novel tumor suppressor gene fusions in bone sarcomas
Ivanov, Danil, Kushnarev, Vladimir, Yong, Sheila T., Kotlov, Nikita, Chernyshov, Konstantin, Bagaev, Alexander, Fowler, Nathan Hale, Conley, Anthony Paul, Cote, Gregory Michael, Chawla, Sant P.
Published in Journal of clinical oncology (01.06.2024)
Published in Journal of clinical oncology (01.06.2024)
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Orally Bioavailable CDK9 Inhibitor Voruciclib Downregulates Oncogenic Pathways in Leukemic Cells from Patients Treated on a Clinical Trial
Dominguez, Edward C., Roleder, Carly, Chen, Canping, Xia, Zheng, Wiley, Sandra, Davids, Matthew S., Danilov, Alexey
Published in Blood (05.11.2024)
Published in Blood (05.11.2024)
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Epigenetic Reprogramming By Histone Deacetylase Inhibitors Improves CAR-T Cell Functions
Gu, Tianning, Zhu, Meng, Han, Yingli, Wang, Rui, Qian, Pengxu, Huang, He
Published in Blood (02.11.2023)
Published in Blood (02.11.2023)
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Radiogenomics of muscle invasive bladder cancer
Qureshi, Touseef, Xie, Yibin, Knott, Simon, Li, Debiao, Rosser, Charles Joel, Furuya, Hideki
Published in Journal of clinical oncology (01.06.2023)
Published in Journal of clinical oncology (01.06.2023)
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