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Bioinformatics Tools (and Web Server) for Cancer Biomarker Development
Year of Publication 2020
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How to use and integrate bioinformatics tools to compare proteomic data from distinct conditions? A tutorial using the pathological similarities between Aortic Valve Stenosis and Coronary Artery Disease as a case-study
Trindade, Fábio, Ferreira, Rita, Magalhães, Beatriz, Leite-Moreira, Adelino, Falcão-Pires, Inês, Vitorino, Rui
Published in Journal of proteomics (16.01.2018)
Published in Journal of proteomics (16.01.2018)
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Comparative modeling of proteins: A method for engaging students' interest in bioinformatics tools
Badotti, Fernanda, Barbosa, Alan Sales, Reis, André Luiz Martins, do Valle, Ítalo Faria, Ambrósio, Lara, Bitar, Mainá
Published in Biochemistry and molecular biology education (01.01.2014)
Published in Biochemistry and molecular biology education (01.01.2014)
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The bacterial pangenome as a new tool for analysing pathogenic bacteria
Rouli, L., Merhej, V., Fournier, P.-E., Raoult, D.
Published in New microbes and new infections (01.09.2015)
Published in New microbes and new infections (01.09.2015)
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RNAseq-Based Prioritization Revealed COL6A5, COL8A1, COL10A1 and MIR146A as Common and Differential Susceptibility Biomarkers for Psoriasis and Psoriatic Arthritis: Confirmation from Genotyping Analysis of 1417 Italian Subjects
Caputo, Valerio, Strafella, Claudia, Termine, Andrea, Campione, Elena, Bianchi, Luca, Novelli, Giuseppe, Giardina, Emiliano, Cascella, Raffaella
Published in International journal of molecular sciences (15.04.2020)
Published in International journal of molecular sciences (15.04.2020)
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A pair of gametologous genes provides further insights into avian comparative cytogenomics
Sazanov, Alexei A., Sazanova, Anna L., Nefedov, Mikhail D., Griffin, Darren K., Romanov, Michael N.
Published in Biológia (01.10.2023)
Published in Biológia (01.10.2023)
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Evaluation of a hypothetical protein for serodiagnosis and as a potential marker for post-treatment serological evaluation of tegumentary leishmaniasis patients
Lima, Mariana Pedrosa, Costa, Lourena Emanuele, Duarte, Mariana Costa, Menezes-Souza, Daniel, Salles, Beatriz Cristina Silveira, de Oliveira Santos, Thaís Teodoro, Ramos, Fernanda Fonseca, Chávez-Fumagalli, Miguel Angel, Kursancew, Amanda Christine Silva, Ambrósio, Roberta Passamani, Roatt, Bruno Mendes, Machado-de-Ávila, Ricardo Andrez, Gonçalves, Denise Utsch, Coelho, Eduardo Antonio Ferraz
Published in Parasitology research (1987) (01.04.2017)
Published in Parasitology research (1987) (01.04.2017)
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N-Acetyltransferase Polymorphism Among Northern Sudanese
Al-Yahyaee, Said, Gaffar, Uzma, Al-Ameri, Maryam M., Qureshi, Mansoor, Zadjali, Fahad, Ali, Baderldin H., Bayoumi, Riad
Published in Human biology (01.08.2007)
Published in Human biology (01.08.2007)
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Value of Bioinformatics Models for Predicting Translational Control of Angiogenesis
Shaposhnikov, Michal, Thakar, Juilee, Berk, Bradford C.
Published in Circulation research (09.05.2025)
Published in Circulation research (09.05.2025)
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A new bioinformatics tool to help assess the significance of BRCA1 variants
Cusin, Isabelle, Teixeira, Daniel, Zahn-Zabal, Monique, Rech de Laval, Valentine, Gleizes, Anne, Viassolo, Valeria, Chappuis, Pierre O., Hutter, Pierre, Bairoch, Amos, Gaudet, Pascale
Published in Human genomics (11.07.2018)
Published in Human genomics (11.07.2018)
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Arg399Gln substitution in XRCC1 as a prognostic and predictive biomarker for prostate cancer: Evidence from 8662 subjects and a structural analysis
Noureddini, Mahdi, Mobasseri, Narges, Karimian, Mohammad, Behjati, Mohaddeseh, Nikzad, Hossein
Published in The journal of gene medicine (01.10.2018)
Published in The journal of gene medicine (01.10.2018)
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Twnbiome: a public database of the healthy Taiwanese gut microbiome
Chattopadhyay, Amrita, Lee, Chien-Yueh, Lee, Ya-Chin, Liu, Chiang-Lin, Chen, Hsin-Kuang, Li, Yung-Hua, Lai, Liang-Chuan, Tsai, Mong-Hsun, Ni, Yen-Hsuan, Chiu, Han-Mo, Lu, Tzu-Pin, Chuang, Eric Y.
Published in BMC bioinformatics (14.12.2023)
Published in BMC bioinformatics (14.12.2023)
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WNT1 Gene from WNT Signaling Pathway Is a Direct Target of miR-122 in Hepatocellular Carcinoma
Ahsani, Zeinab, Mohammadi-Yeganeh, Samira, Kia, Vahid, Karimkhanloo, Hamzeh, Zarghami, Nosratollah, Paryan, Mahdi
Published in Applied biochemistry and biotechnology (01.03.2017)
Published in Applied biochemistry and biotechnology (01.03.2017)
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Earl Grey: A Fully Automated User-Friendly Transposable Element Annotation and Analysis Pipeline
Baril, Tobias, Galbraith, James, Hayward, Alex
Published in Molecular biology and evolution (02.04.2024)
Published in Molecular biology and evolution (02.04.2024)
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MatchTope: A tool to predict the cross reactivity of peptides complexed with Major Histocompatibility Complex I
Mendes, Marcus Fabiano de Almeida, de Souza Bragatte, Marcelo, Vianna, Priscila, de Freitas, Martiela Vaz, Pöhner, Ina, Richter, Stefan, Wade, Rebecca C., Salzano, Francisco Mauro, Vieira, Gustavo Fioravanti
Published in Frontiers in immunology (28.10.2022)
Published in Frontiers in immunology (28.10.2022)
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Evolution of within-host variants of the hepatitis C virus
Riaz, Nasir, Leung, Preston, Bull, Rowena A., Lloyd, Andrew R., Rodrigo, Chaturaka
Published in Infection, genetics and evolution (01.04.2022)
Published in Infection, genetics and evolution (01.04.2022)
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Homozygous variants in AKAP3 induce asthenoteratozoospermia and male infertility
Liu, Chunyu, Shen, Ying, Tang, Shuyan, Wang, Jiaxiong, Zhou, Yiling, Tian, Shixiong, Wu, Huan, Cong, Jiangshan, He, Xiaojin, Jin, Li, Cao, Yunxia, Yang, Yihong, Zhang, Feng
Published in Journal of medical genetics (01.02.2023)
Published in Journal of medical genetics (01.02.2023)
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Long‐read DNA metabarcoding of ribosomal RNA in the analysis of fungi from aquatic environments
Heeger, Felix, Bourne, Elizabeth C., Baschien, Christiane, Yurkov, Andrey, Bunk, Boyke, Spröer, Cathrin, Overmann, Jörg, Mazzoni, Camila J., Monaghan, Michael T.
Published in Molecular ecology resources (01.11.2018)
Published in Molecular ecology resources (01.11.2018)
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